RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, human

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNF8-208	ENST00000510195	TBX21	Q9UL17	535 aa		31.21	■■■□□ 2.59
SNF8-208	ENST00000510195	DYNC1LI2	O43237	492 aa	Predicted RBP	31.2	■■■□□ 2.59
SNF8-208	ENST00000510195	TIMP1	P01033	207 aa		31.2	■■■□□ 2.59
SNF8-208	ENST00000510195	FPGS	Q05932	587 aa		31.2	■■■□□ 2.59
SNF8-208	ENST00000510195	KIAA1211	Q6ZU35	1233 aa		31.2	■■■□□ 2.59
SNF8-208	ENST00000510195	EEPD1	Q7L9B9	569 aa		31.2	■■■□□ 2.59
SNF8-208	ENST00000510195	STXBP5L	Q9Y2K9	1186 aa		31.2	■■■□□ 2.59
SNF8-208	ENST00000510195		B4DLN1	442 aa		31.19	■■■□□ 2.58
SNF8-208	ENST00000510195	TLR3	O15455	904 aa	Known RBP	31.19	■■■□□ 2.58
SNF8-208	ENST00000510195	GOLGA8H	P0CJ92	632 aa		31.19	■■■□□ 2.58
SNF8-208	ENST00000510195	MRPL12	P52815	198 aa	Known RBP	31.19	■■■□□ 2.58
SNF8-208	ENST00000510195	RPS6	P62753	249 aa	Known RBP	31.19	■■■□□ 2.58
SNF8-208	ENST00000510195	BEX3	Q00994	111 aa		31.19	■■■□□ 2.58
SNF8-208	ENST00000510195	DUSP28	Q4G0W2	176 aa		31.19	■■■□□ 2.58
SNF8-208	ENST00000510195	UBAC1	Q9BSL1	405 aa		31.19	■■■□□ 2.58
SNF8-208	ENST00000510195	TNKS	O95271	1327 aa		31.19	■■■□□ 2.58
SNF8-208	ENST00000510195	RBM47	A0AV96	593 aa	Known RBP	31.18	■■■□□ 2.58
SNF8-208	ENST00000510195	CALML3	P27482	149 aa		31.18	■■■□□ 2.58
SNF8-208	ENST00000510195	SLC30A10	Q6XR72	485 aa		31.18	■■■□□ 2.58
SNF8-208	ENST00000510195	SLC43A3	Q8NBI5	491 aa		31.18	■■■□□ 2.58
SNF8-208	ENST00000510195	UBA5	Q9GZZ9	404 aa		31.18	■■■□□ 2.58
SNF8-208	ENST00000510195	SMAD3	P84022	425 aa	Known RBP	31.17	■■■□□ 2.58
SNF8-208	ENST00000510195	FAM126B	Q8IXS8	530 aa		31.17	■■■□□ 2.58
SNF8-208	ENST00000510195	IL25	Q9H293	177 aa		31.17	■■■□□ 2.58
SNF8-208	ENST00000510195	DDX49	Q9Y6V7	483 aa	Known RBP	31.17	■■■□□ 2.58
SNF8-208	ENST00000510195	EDNRB	P24530	442 aa		31.16	■■■□□ 2.58
SNF8-208	ENST00000510195	MFSD5	Q6N075	450 aa		31.16	■■■□□ 2.58
SNF8-208	ENST00000510195	CXCL17	Q6UXB2	119 aa		31.16	■■■□□ 2.58
SNF8-208	ENST00000510195	ADGRF4	Q8IZF3	695 aa		31.16	■■■□□ 2.58
SNF8-208	ENST00000510195	WDR11	Q9BZH6	1224 aa		31.16	■■■□□ 2.58
SNF8-208	ENST00000510195	PARP1	P09874	1014 aa	Known RBP	31.15	■■■□□ 2.58
SNF8-208	ENST00000510195	CDC37	Q16543	378 aa	Predicted RBP	31.15	■■■□□ 2.58
SNF8-208	ENST00000510195	ABCB11	O95342	1321 aa		31.15	■■■□□ 2.58
SNF8-208	ENST00000510195	NKRF	O15226	690 aa	Known RBP eCLIP	31.14	■■■□□ 2.58
SNF8-208	ENST00000510195	CD4	P01730	458 aa		31.14	■■■□□ 2.58
SNF8-208	ENST00000510195	CHML	P26374	656 aa		31.14	■■■□□ 2.58
SNF8-208	ENST00000510195	PDE4D	Q08499	809 aa		31.14	■■■□□ 2.58
SNF8-208	ENST00000510195	TRDN	Q13061	729 aa		31.14	■■■□□ 2.58
SNF8-208	ENST00000510195	USH1G	Q495M9	461 aa		31.14	■■■□□ 2.58
SNF8-208	ENST00000510195	IFIT1B	Q5T764	474 aa	Known RBP	31.14	■■■□□ 2.58
SNF8-208	ENST00000510195		U3KPZ7	1027 aa	Predicted RBP	31.14	■■■□□ 2.58
SNF8-208	ENST00000510195	EPHB4	P54760	987 aa		31.13	■■■□□ 2.57
SNF8-208	ENST00000510195	ITGA7	Q13683	1181 aa		31.13	■■■□□ 2.57
SNF8-208	ENST00000510195	ZNF697	Q5TEC3	545 aa		31.13	■■■□□ 2.57
SNF8-208	ENST00000510195	MCF2L2	Q86YR7	1114 aa		31.13	■■■□□ 2.57
SNF8-208	ENST00000510195	RNPC3	Q96LT9	517 aa	Known RBP	31.13	■■■□□ 2.57
SNF8-208	ENST00000510195	CPT1A	P50416	773 aa		31.12	■■■□□ 2.57
SNF8-208	ENST00000510195	PPIG	Q13427	754 aa	Known RBP eCLIP	31.12	■■■□□ 2.57	2e-10	■□□□□ 9.9
SNF8-208	ENST00000510195	TMEM199	Q8N511	208 aa		31.12	■■■□□ 2.57
SNF8-208	ENST00000510195	CPVL	Q9H3G5	476 aa		31.12	■■■□□ 2.57
SNF8-208	ENST00000510195	POLR3E	Q9NVU0	708 aa		31.12	■■■□□ 2.57
SNF8-208	ENST00000510195	SEC23A	Q15436	765 aa		31.11	■■■□□ 2.57
SNF8-208	ENST00000510195	SCFD2	Q8WU76	684 aa		31.11	■■■□□ 2.57
SNF8-208	ENST00000510195	MRPL11	Q9Y3B7	192 aa	Known RBP	31.11	■■■□□ 2.57
SNF8-208	ENST00000510195	BRDT	Q58F21	947 aa	Predicted RBP	31.1	■■■□□ 2.57
SNF8-208	ENST00000510195	TMEM63B	Q5T3F8	832 aa		31.1	■■■□□ 2.57
SNF8-208	ENST00000510195	SLC17A8	Q8NDX2	589 aa		31.1	■■■□□ 2.57
SNF8-208	ENST00000510195	JMJD4	Q9H9V9	463 aa		31.1	■■■□□ 2.57
SNF8-208	ENST00000510195		A0A0C4DFX4	3053 aa		31.1	■■■□□ 2.57
SNF8-208	ENST00000510195	GRIN2D	O15399	1336 aa		31.09	■■■□□ 2.57
SNF8-208	ENST00000510195	PPP2R5B	Q15173	497 aa		31.09	■■■□□ 2.57
SNF8-208	ENST00000510195	QRICH1	Q2TAL8	776 aa		31.09	■■■□□ 2.57
SNF8-208	ENST00000510195	FBXO11	Q86XK2	927 aa		31.09	■■■□□ 2.57
SNF8-208	ENST00000510195	DHX16	O60231	1041 aa	Known RBP	31.08	■■■□□ 2.57
SNF8-208	ENST00000510195	CYP21A2	P08686	494 aa		31.08	■■■□□ 2.57
SNF8-208	ENST00000510195	PTGS1	P23219	599 aa		31.08	■■■□□ 2.57
SNF8-208	ENST00000510195	IRX6	P78412	446 aa	Predicted RBP	31.08	■■■□□ 2.57
SNF8-208	ENST00000510195	IWS1	Q96ST2	819 aa		31.08	■■■□□ 2.57
SNF8-208	ENST00000510195	TMEM265	A0A087WTH1	108 aa		31.07	■■■□□ 2.56
SNF8-208	ENST00000510195	SGSM2	O43147	1006 aa		31.07	■■■□□ 2.56
SNF8-208	ENST00000510195	KPNA6	O60684	536 aa		31.07	■■■□□ 2.56
SNF8-208	ENST00000510195	CYB5R4	Q7L1T6	521 aa		31.07	■■■□□ 2.56
SNF8-208	ENST00000510195	NSUN6	Q8TEA1	469 aa	Known RBP	31.07	■■■□□ 2.56
SNF8-208	ENST00000510195	GUCD1	Q96NT3	240 aa		31.07	■■■□□ 2.56
SNF8-208	ENST00000510195	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	31.06	■■■□□ 2.56
SNF8-208	ENST00000510195	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	31.06	■■■□□ 2.56
SNF8-208	ENST00000510195	KLRF2	D3W0D1	207 aa		31.06	■■■□□ 2.56
SNF8-208	ENST00000510195	PTH1R	Q03431	593 aa		31.06	■■■□□ 2.56
SNF8-208	ENST00000510195	TTLL4	Q14679	1199 aa		31.06	■■■□□ 2.56
SNF8-208	ENST00000510195	OR6J1	Q8NGC5	347 aa		31.06	■■■□□ 2.56
SNF8-208	ENST00000510195	SYTL5	Q8TDW5	730 aa	Predicted RBP	31.06	■■■□□ 2.56
SNF8-208	ENST00000510195	AMN	Q9BXJ7	453 aa		31.06	■■■□□ 2.56
SNF8-208	ENST00000510195	SEMA6B	Q9H3T3	888 aa		31.06	■■■□□ 2.56
SNF8-208	ENST00000510195	VAT1L	Q9HCJ6	419 aa		31.06	■■■□□ 2.56
SNF8-208	ENST00000510195	MAP3K20	Q9NYL2	800 aa	Known RBP	31.06	■■■□□ 2.56
SNF8-208	ENST00000510195	MYH6	P13533	1939 aa		31.06	■■■□□ 2.56
SNF8-208	ENST00000510195	ERICH2	A1L162	156 aa		31.05	■■■□□ 2.56
SNF8-208	ENST00000510195	PURA	Q00577	322 aa	Known RBP	31.05	■■■□□ 2.56
SNF8-208	ENST00000510195	STAG2	Q8N3U4	1231 aa		31.05	■■■□□ 2.56
SNF8-208	ENST00000510195	MTMR8	Q96EF0	704 aa		31.05	■■■□□ 2.56
SNF8-208	ENST00000510195	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	31.05	■■■□□ 2.56
SNF8-208	ENST00000510195	GPHN	Q9NQX3	736 aa	Predicted RBP	31.05	■■■□□ 2.56
SNF8-208	ENST00000510195	MAD2L2	Q9UI95	211 aa		31.05	■■■□□ 2.56
SNF8-208	ENST00000510195	PALM3	A6NDB9	673 aa	Predicted RBP	31.04	■■■□□ 2.56
SNF8-208	ENST00000510195		A6NJR5	290 aa		31.04	■■■□□ 2.56
SNF8-208	ENST00000510195	TXN	P10599	105 aa	Known RBP	31.04	■■■□□ 2.56
SNF8-208	ENST00000510195	CSF2RA	P15509	400 aa		31.04	■■■□□ 2.56
SNF8-208	ENST00000510195	TRAF1	Q13077	416 aa		31.04	■■■□□ 2.56
SNF8-208	ENST00000510195	SART3	Q15020	963 aa	Known RBP	31.04	■■■□□ 2.56
SNF8-208	ENST00000510195	PSRC1	Q6PGN9	363 aa	Predicted RBP	31.04	■■■□□ 2.56

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms