RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 MPHOSPH6Q99547 160 aaKnown RBP17.47■□□□□ 0.39
SMAD5-206ENST00000509962 GPHNQ9NQX3 736 aaPredicted RBP17.47■□□□□ 0.39
SMAD5-206ENST00000509962 POLR3EQ9NVU0 708 aa17.47■□□□□ 0.39
SMAD5-206ENST00000509962 TRIM6-TRIM34B2RNG4 842 aa17.46■□□□□ 0.39
SMAD5-206ENST00000509962 NFIBO00712 420 aa17.46■□□□□ 0.39
SMAD5-206ENST00000509962 B4GALT4O60513 344 aa17.46■□□□□ 0.39
SMAD5-206ENST00000509962 SUPT20HL2P0C7V6 817 aa17.46■□□□□ 0.39
SMAD5-206ENST00000509962 CALML3P27482 149 aa17.46■□□□□ 0.39
SMAD5-206ENST00000509962 RRP1P56182 461 aaKnown RBP17.46■□□□□ 0.39
SMAD5-206ENST00000509962 RNF207Q6ZRF8 634 aa17.46■□□□□ 0.39
SMAD5-206ENST00000509962 OTOP2Q7RTS6 562 aa17.46■□□□□ 0.39
SMAD5-206ENST00000509962 PPM1EQ8WY54 764 aa17.46■□□□□ 0.39
SMAD5-206ENST00000509962 NOC4LQ9BVI4 516 aaKnown RBP17.46■□□□□ 0.39
SMAD5-206ENST00000509962 PRDM12Q9H4Q4 367 aa17.46■□□□□ 0.39
SMAD5-206ENST00000509962 SLC28A3Q9HAS3 691 aa17.46■□□□□ 0.39
SMAD5-206ENST00000509962 UMODL1Q5DID0 1318 aa17.46■□□□□ 0.38
SMAD5-206ENST00000509962 A0A0D9SFI3 127 aa17.45■□□□□ 0.38
SMAD5-206ENST00000509962 MYL3P08590 195 aa17.45■□□□□ 0.38
SMAD5-206ENST00000509962 CPT1AP50416 773 aa17.45■□□□□ 0.38
SMAD5-206ENST00000509962 HAND2P61296 217 aa17.45■□□□□ 0.38
SMAD5-206ENST00000509962 HDAC1Q13547 482 aaPredicted RBP17.45■□□□□ 0.38
SMAD5-206ENST00000509962 BRDTQ58F21 947 aaPredicted RBP17.45■□□□□ 0.38
SMAD5-206ENST00000509962 RILPL2Q969X0 211 aa17.45■□□□□ 0.38
SMAD5-206ENST00000509962 CRBNQ96SW2 442 aa17.45■□□□□ 0.38
SMAD5-206ENST00000509962 CXXC1Q9P0U4 656 aaPredicted RBP17.45■□□□□ 0.38
SMAD5-206ENST00000509962 B4DLN1 442 aa17.44■□□□□ 0.38
SMAD5-206ENST00000509962 PDHBP11177 359 aa17.44■□□□□ 0.38
SMAD5-206ENST00000509962 PCP11498 1178 aaKnown RBP17.44■□□□□ 0.38
SMAD5-206ENST00000509962 MRPL12P52815 198 aaKnown RBP17.44■□□□□ 0.38
SMAD5-206ENST00000509962 MFAP1P55081 439 aaKnown RBP17.44■□□□□ 0.38
SMAD5-206ENST00000509962 PDE4DQ08499 809 aa17.44■□□□□ 0.38
SMAD5-206ENST00000509962 NMIQ13287 307 aaPredicted RBP17.44■□□□□ 0.38
SMAD5-206ENST00000509962 AKNAD1Q5T1N1 836 aa17.44■□□□□ 0.38
SMAD5-206ENST00000509962 ALDH8A1Q9H2A2 487 aaPredicted RBP17.44■□□□□ 0.38
SMAD5-206ENST00000509962 SLC4A7Q9Y6M7 1214 aa17.44■□□□□ 0.38
SMAD5-206ENST00000509962 RBM47A0AV96 593 aaKnown RBP17.43■□□□□ 0.38
SMAD5-206ENST00000509962 IGFBP4P22692 258 aa17.43■□□□□ 0.38
SMAD5-206ENST00000509962 ZNF543Q08ER8 600 aa17.43■□□□□ 0.38
SMAD5-206ENST00000509962 TJAP1Q5JTD0 557 aa17.43■□□□□ 0.38
SMAD5-206ENST00000509962 USP38Q8NB14 1042 aa17.43■□□□□ 0.38
SMAD5-206ENST00000509962 OR6J1Q8NGC5 347 aa17.43■□□□□ 0.38
SMAD5-206ENST00000509962 CLEC4DQ8WXI8 215 aa17.43■□□□□ 0.38
SMAD5-206ENST00000509962 MTG1Q9BT17 334 aaPredicted RBP17.43■□□□□ 0.38
SMAD5-206ENST00000509962 NKX2-4Q9H2Z4 354 aa17.43■□□□□ 0.38
SMAD5-206ENST00000509962 RNF41Q9H4P4 317 aaPredicted RBP17.43■□□□□ 0.38
SMAD5-206ENST00000509962 ZMYM6O95789 1325 aa17.43■□□□□ 0.38
SMAD5-206ENST00000509962 CCDC171Q6TFL3 1326 aa17.43■□□□□ 0.38
SMAD5-206ENST00000509962 NKRFO15226 690 aaKnown RBP eCLIP17.42■□□□□ 0.38
SMAD5-206ENST00000509962 RPS6P62753 249 aaKnown RBP17.42■□□□□ 0.38
SMAD5-206ENST00000509962 PURAQ00577 322 aaKnown RBP17.42■□□□□ 0.38
SMAD5-206ENST00000509962 SLC30A10Q6XR72 485 aa17.42■□□□□ 0.38
SMAD5-206ENST00000509962 ZNF589Q86UQ0 364 aaPredicted RBP17.42■□□□□ 0.38
SMAD5-206ENST00000509962 DNERQ8NFT8 737 aa17.42■□□□□ 0.38
SMAD5-206ENST00000509962 ESR2Q92731 530 aa17.42■□□□□ 0.38
SMAD5-206ENST00000509962 SCLYQ96I15 445 aa17.42■□□□□ 0.38
SMAD5-206ENST00000509962 WNT8AQ9H1J5 351 aa17.42■□□□□ 0.38
SMAD5-206ENST00000509962 TRMT13Q9NUP7 481 aaKnown RBP17.42■□□□□ 0.38
SMAD5-206ENST00000509962 RAD50Q92878 1312 aa17.42■□□□□ 0.38
SMAD5-206ENST00000509962 LRRC37A2A6NM11 1700 aa17.41■□□□□ 0.38
SMAD5-206ENST00000509962 MYO9BQ13459 2157 aa17.41■□□□□ 0.38
SMAD5-206ENST00000509962 ZBBXA8MT70 800 aa17.41■□□□□ 0.38
SMAD5-206ENST00000509962 ZNF213O14771 459 aa17.41■□□□□ 0.38
SMAD5-206ENST00000509962 KPNA6O60684 536 aa17.41■□□□□ 0.38
SMAD5-206ENST00000509962 CYP2C9P11712 490 aa17.41■□□□□ 0.38
SMAD5-206ENST00000509962 PPP2R5BQ15173 497 aa17.41■□□□□ 0.38
SMAD5-206ENST00000509962 CCDC85BQ15834 202 aaPredicted RBP17.41■□□□□ 0.38
SMAD5-206ENST00000509962 FAM47CQ5HY64 1035 aa17.41■□□□□ 0.38
SMAD5-206ENST00000509962 GPATCH4Q5T3I0 446 aaKnown RBP17.41■□□□□ 0.38
SMAD5-206ENST00000509962 SCFD2Q8WU76 684 aa17.41■□□□□ 0.38
SMAD5-206ENST00000509962 LNPKQ9C0E8 428 aa17.41■□□□□ 0.38
SMAD5-206ENST00000509962 TNKSO95271 1327 aa17.41■□□□□ 0.38
SMAD5-206ENST00000509962 WDR19Q8NEZ3 1342 aa17.41■□□□□ 0.38
SMAD5-206ENST00000509962 LCTP09848 1927 aa17.41■□□□□ 0.38
SMAD5-206ENST00000509962 PFKMP08237 780 aa17.4■□□□□ 0.38
SMAD5-206ENST00000509962 GOLGA8HP0CJ92 632 aa17.4■□□□□ 0.38
SMAD5-206ENST00000509962 SNHG28P0DPA3 235 aa17.4■□□□□ 0.38
SMAD5-206ENST00000509962 TXNP10599 105 aaKnown RBP17.4■□□□□ 0.38
SMAD5-206ENST00000509962 SDSP20132 328 aa17.4■□□□□ 0.38
SMAD5-206ENST00000509962 RABGGTBP53611 331 aa17.4■□□□□ 0.38
SMAD5-206ENST00000509962 NBPF20Q3BBV1 942 aa17.4■□□□□ 0.38
SMAD5-206ENST00000509962 USH1GQ495M9 461 aa17.4■□□□□ 0.38
SMAD5-206ENST00000509962 CCDC178Q5BJE1 867 aa17.4■□□□□ 0.38
SMAD5-206ENST00000509962 DEFB128Q7Z7B8 93 aa17.4■□□□□ 0.38
SMAD5-206ENST00000509962 DGKHQ86XP1 1220 aa17.4■□□□□ 0.38
SMAD5-206ENST00000509962 RETREG2Q8NC44 543 aa17.4■□□□□ 0.38
SMAD5-206ENST00000509962 RGS22Q8NE09 1264 aa17.4■□□□□ 0.38
SMAD5-206ENST00000509962 ZKSCAN3Q9BRR0 538 aa17.4■□□□□ 0.38
SMAD5-206ENST00000509962 PRDM6Q9NQX0 595 aa17.4■□□□□ 0.38
SMAD5-206ENST00000509962 YBX2Q9Y2T7 364 aaKnown RBP17.4■□□□□ 0.38
SMAD5-206ENST00000509962 A6NJR5 290 aa17.39■□□□□ 0.37
SMAD5-206ENST00000509962 ACTN1P12814 892 aa17.39■□□□□ 0.37
SMAD5-206ENST00000509962 TTLL4Q14679 1199 aa17.39■□□□□ 0.37
SMAD5-206ENST00000509962 B4GALNT3Q6L9W6 998 aa17.39■□□□□ 0.37
SMAD5-206ENST00000509962 IQCA1Q86XH1 822 aa17.39■□□□□ 0.37
SMAD5-206ENST00000509962 ATXN2LQ8WWM7 1075 aaKnown RBP17.39■□□□□ 0.37
SMAD5-206ENST00000509962 UBA5Q9GZZ9 404 aa17.39■□□□□ 0.37
SMAD5-206ENST00000509962 RWDD1Q9H446 243 aaPredicted RBP17.39■□□□□ 0.37
SMAD5-206ENST00000509962 PCDHA11Q9Y5I1 949 aa17.39■□□□□ 0.37
SMAD5-206ENST00000509962 ATP2A2P16615 1042 aaKnown RBP17.38■□□□□ 0.37
SMAD5-206ENST00000509962 EDNRBP24530 442 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms