RNA–Protein interactions for RNA: ENST00000509436.1

NDFIP1-204, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 5

Gene NDFIP1, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-204ENST00000509436 CXXC1Q9P0U4 656 aaPredicted RBP18.68■□□□□ 0.58
NDFIP1-204ENST00000509436 USP17L10C9JJH3 530 aa18.67■□□□□ 0.58
NDFIP1-204ENST00000509436 F5H6K3 240 aa18.67■□□□□ 0.58
NDFIP1-204ENST00000509436 SNHG28P0DPA3 235 aa18.67■□□□□ 0.58
NDFIP1-204ENST00000509436 SLC1A4P43007 532 aa18.67■□□□□ 0.58
NDFIP1-204ENST00000509436 KLRC3Q07444 240 aa18.67■□□□□ 0.58
NDFIP1-204ENST00000509436 GPATCH4Q5T3I0 446 aaKnown RBP18.67■□□□□ 0.58
NDFIP1-204ENST00000509436 TMTC3Q6ZXV5 915 aa18.67■□□□□ 0.58
NDFIP1-204ENST00000509436 ARRDC4Q8NCT1 418 aa18.67■□□□□ 0.58
NDFIP1-204ENST00000509436 NSUN7Q8NE18 718 aaKnown RBP18.67■□□□□ 0.58
NDFIP1-204ENST00000509436 PRDM12Q9H4Q4 367 aa18.67■□□□□ 0.58
NDFIP1-204ENST00000509436 VCPKMTQ9H867 229 aa18.67■□□□□ 0.58
NDFIP1-204ENST00000509436 MAD2L2Q9UI95 211 aa18.67■□□□□ 0.58
NDFIP1-204ENST00000509436 ISY1Q9ULR0 285 aaKnown RBP18.67■□□□□ 0.58
NDFIP1-204ENST00000509436 KIF3AQ9Y496 699 aa18.67■□□□□ 0.58
NDFIP1-204ENST00000509436 PTPDC1A2A3K4 754 aa18.66■□□□□ 0.58
NDFIP1-204ENST00000509436 PALM3A6NDB9 673 aaPredicted RBP18.66■□□□□ 0.58
NDFIP1-204ENST00000509436 NDUFB10O96000 172 aa18.66■□□□□ 0.58
NDFIP1-204ENST00000509436 HOXC6P09630 235 aa18.66■□□□□ 0.58
NDFIP1-204ENST00000509436 IFNAR1P17181 557 aa18.66■□□□□ 0.58
NDFIP1-204ENST00000509436 ZNF543Q08ER8 600 aa18.66■□□□□ 0.58
NDFIP1-204ENST00000509436 USP17L2Q6R6M4 530 aa18.66■□□□□ 0.58
NDFIP1-204ENST00000509436 TRIM22Q8IYM9 498 aa18.66■□□□□ 0.58
NDFIP1-204ENST00000509436 GMCL1Q96IK5 515 aa18.66■□□□□ 0.58
NDFIP1-204ENST00000509436 KIAA1683Q9H0B3 1180 aa18.66■□□□□ 0.58
NDFIP1-204ENST00000509436 C19orf81C9J6K1 198 aa18.65■□□□□ 0.58
NDFIP1-204ENST00000509436 KIAA0355O15063 1070 aa18.65■□□□□ 0.58
NDFIP1-204ENST00000509436 CTDNEP1O95476 244 aa18.65■□□□□ 0.58
NDFIP1-204ENST00000509436 CYBAP13498 195 aa18.65■□□□□ 0.58
NDFIP1-204ENST00000509436 GJB2P29033 226 aa18.65■□□□□ 0.58
NDFIP1-204ENST00000509436 CNGA1P29973 690 aa18.65■□□□□ 0.58
NDFIP1-204ENST00000509436 AKAP17AQ02040 695 aaKnown RBP18.65■□□□□ 0.58
NDFIP1-204ENST00000509436 SSRP1Q08945 709 aaKnown RBP18.65■□□□□ 0.58
NDFIP1-204ENST00000509436 ZYXQ15942 572 aaKnown RBP18.65■□□□□ 0.58
NDFIP1-204ENST00000509436 TMEM31Q5JXX7 168 aa18.65■□□□□ 0.58
NDFIP1-204ENST00000509436 FAM184AQ8NB25 1140 aa18.65■□□□□ 0.58
NDFIP1-204ENST00000509436 SMARCC2Q8TAQ2 1214 aa18.65■□□□□ 0.58
NDFIP1-204ENST00000509436 KBTBD13C9JR72 458 aa18.64■□□□□ 0.57
NDFIP1-204ENST00000509436 KLRF2D3W0D1 207 aa18.64■□□□□ 0.57
NDFIP1-204ENST00000509436 JAK2O60674 1132 aa18.64■□□□□ 0.57
NDFIP1-204ENST00000509436 PLEKHA8P1O95397 391 aa18.64■□□□□ 0.57
NDFIP1-204ENST00000509436 BMP3P12645 472 aa18.64■□□□□ 0.57
NDFIP1-204ENST00000509436 SMARCA1P28370 1054 aa18.64■□□□□ 0.57
NDFIP1-204ENST00000509436 BACE1P56817 501 aa18.64■□□□□ 0.57
NDFIP1-204ENST00000509436 TLE2Q04725 743 aa18.64■□□□□ 0.57
NDFIP1-204ENST00000509436 MTMR2Q13614 643 aa18.64■□□□□ 0.57
NDFIP1-204ENST00000509436 CCDC85BQ15834 202 aaPredicted RBP18.64■□□□□ 0.57
NDFIP1-204ENST00000509436 NTRK3Q16288 839 aa18.64■□□□□ 0.57
NDFIP1-204ENST00000509436 STAG2Q8N3U4 1231 aa18.64■□□□□ 0.57
NDFIP1-204ENST00000509436 GTF3C2Q8WUA4 911 aaPredicted RBP18.64■□□□□ 0.57
NDFIP1-204ENST00000509436 DDX11Q96FC9 970 aa18.64■□□□□ 0.57
NDFIP1-204ENST00000509436 SLC26A6Q9BXS9 759 aa18.64■□□□□ 0.57
NDFIP1-204ENST00000509436 PBX4Q9BYU1 374 aa18.64■□□□□ 0.57
NDFIP1-204ENST00000509436 C11orf16Q9NQ32 467 aa18.64■□□□□ 0.57
NDFIP1-204ENST00000509436 FRMPD2Q68DX3 1309 aaPredicted RBP18.64■□□□□ 0.57
NDFIP1-204ENST00000509436 STK36Q9NRP7 1315 aa18.64■□□□□ 0.57
NDFIP1-204ENST00000509436 MYO9BQ13459 2157 aa18.64■□□□□ 0.57
NDFIP1-204ENST00000509436 ZNF236Q9UL36 1845 aa18.63■□□□□ 0.57
NDFIP1-204ENST00000509436 GPR37L1O60883 481 aa18.63■□□□□ 0.57
NDFIP1-204ENST00000509436 GOLGA8HP0CJ92 632 aa18.63■□□□□ 0.57
NDFIP1-204ENST00000509436 PBX2P40425 430 aa18.63■□□□□ 0.57
NDFIP1-204ENST00000509436 FPGSQ05932 587 aa18.63■□□□□ 0.57
NDFIP1-204ENST00000509436 RASGRP2Q7LDG7 609 aa18.63■□□□□ 0.57
NDFIP1-204ENST00000509436 CCAR1Q8IX12 1150 aaKnown RBP18.63■□□□□ 0.57
NDFIP1-204ENST00000509436 SPICE1Q8N0Z3 855 aa18.63■□□□□ 0.57
NDFIP1-204ENST00000509436 CCDC82Q8N4S0 544 aa18.63■□□□□ 0.57
NDFIP1-204ENST00000509436 SRBD1Q8N5C6 995 aaKnown RBP18.63■□□□□ 0.57
NDFIP1-204ENST00000509436 WASF1Q92558 559 aa18.63■□□□□ 0.57
NDFIP1-204ENST00000509436 RNF26Q9BY78 433 aaPredicted RBP18.63■□□□□ 0.57
NDFIP1-204ENST00000509436 GPCPD1Q9NPB8 672 aa18.63■□□□□ 0.57
NDFIP1-204ENST00000509436 TMOD4Q9NZQ9 345 aa18.63■□□□□ 0.57
NDFIP1-204ENST00000509436 ORC3Q9UBD5 711 aaPredicted RBP18.63■□□□□ 0.57
NDFIP1-204ENST00000509436 SLC15A5A6NIM6 579 aa18.62■□□□□ 0.57
NDFIP1-204ENST00000509436 WDR46O15213 610 aaKnown RBP18.62■□□□□ 0.57
NDFIP1-204ENST00000509436 CLTBP09497 229 aa18.62■□□□□ 0.57
NDFIP1-204ENST00000509436 PDCP20941 246 aa18.62■□□□□ 0.57
NDFIP1-204ENST00000509436 CYP2C19P33261 490 aa18.62■□□□□ 0.57
NDFIP1-204ENST00000509436 ADCYAP1R1P41586 468 aa18.62■□□□□ 0.57
NDFIP1-204ENST00000509436 KCTD1Q719H9 257 aa18.62■□□□□ 0.57
NDFIP1-204ENST00000509436 CMTR1Q8N1G2 835 aaKnown RBP18.62■□□□□ 0.57
NDFIP1-204ENST00000509436 PHKBQ93100 1093 aa18.62■□□□□ 0.57
NDFIP1-204ENST00000509436 SPZ1Q9BXG8 430 aa18.62■□□□□ 0.57
NDFIP1-204ENST00000509436 CNTNAP5Q8WYK1 1306 aa18.62■□□□□ 0.57
NDFIP1-204ENST00000509436 PRPF3O43395 683 aaKnown RBP18.61■□□□□ 0.57
NDFIP1-204ENST00000509436 CNMDO75829 334 aa18.61■□□□□ 0.57
NDFIP1-204ENST00000509436 DEXIO95424 95 aa18.61■□□□□ 0.57
NDFIP1-204ENST00000509436 PTPREP23469 700 aa18.61■□□□□ 0.57
NDFIP1-204ENST00000509436 IKQ13123 557 aaPredicted RBP18.61■□□□□ 0.57
NDFIP1-204ENST00000509436 RASIP1Q5U651 963 aa18.61■□□□□ 0.57
NDFIP1-204ENST00000509436 NPLOC4Q8TAT6 608 aa18.61■□□□□ 0.57
NDFIP1-204ENST00000509436 C12orf42Q96LP6 360 aa18.61■□□□□ 0.57
NDFIP1-204ENST00000509436 GBF1Q92538 1859 aa18.6■□□□□ 0.57
NDFIP1-204ENST00000509436 TMEM232C9JQI7 657 aa18.6■□□□□ 0.57
NDFIP1-204ENST00000509436 PDIA4P13667 645 aaKnown RBP18.6■□□□□ 0.57
NDFIP1-204ENST00000509436 RAG1P15918 1043 aa18.6■□□□□ 0.57
NDFIP1-204ENST00000509436 FUT2Q10981 343 aa18.6■□□□□ 0.57
NDFIP1-204ENST00000509436 GRB14Q14449 540 aa18.6■□□□□ 0.57
NDFIP1-204ENST00000509436 FAM83BQ5T0W9 1011 aa18.6■□□□□ 0.57
NDFIP1-204ENST00000509436 FAM160B2Q86V87 743 aa18.6■□□□□ 0.57
NDFIP1-204ENST00000509436 CHURC1Q8WUH1 139 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms