RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 NFKBIEO00221 500 aa16.77■□□□□ 0.28
PHF3-209ENST00000509330 SFPQP23246 707 aaKnown RBP eCLIP16.77■□□□□ 0.28
PHF3-209ENST00000509330 CIAPIN1Q6FI81 312 aa16.77■□□□□ 0.28
PHF3-209ENST00000509330 ZNF592Q92610 1267 aa16.77■□□□□ 0.28
PHF3-209ENST00000509330 MMTAG2Q9BU76 263 aaKnown RBP16.77■□□□□ 0.28
PHF3-209ENST00000509330 FZD1Q9UP38 647 aa16.77■□□□□ 0.28
PHF3-209ENST00000509330 KMT5BQ4FZB7 885 aa16.77■□□□□ 0.28
PHF3-209ENST00000509330 SYDE2Q5VT97 1194 aa16.77■□□□□ 0.28
PHF3-209ENST00000509330 ZBTB21Q9ULJ3 1066 aa16.77■□□□□ 0.28
PHF3-209ENST00000509330 hCG_1984214I3L0E3 225 aa16.77■□□□□ 0.27
PHF3-209ENST00000509330 TEX33O43247 280 aa16.77■□□□□ 0.27
PHF3-209ENST00000509330 TBC1D10BQ4KMP7 808 aaPredicted RBP16.77■□□□□ 0.27
PHF3-209ENST00000509330 SLC30A10Q6XR72 485 aa16.77■□□□□ 0.27
PHF3-209ENST00000509330 DYMQ7RTS9 669 aa16.77■□□□□ 0.27
PHF3-209ENST00000509330 FCHSD1Q86WN1 690 aa16.77■□□□□ 0.27
PHF3-209ENST00000509330 ZNF713Q8N859 430 aaPredicted RBP16.77■□□□□ 0.27
PHF3-209ENST00000509330 MYOZ2Q9NPC6 264 aa16.77■□□□□ 0.27
PHF3-209ENST00000509330 MYO1BO43795 1136 aa16.76■□□□□ 0.27
PHF3-209ENST00000509330 PRCPP42785 496 aa16.76■□□□□ 0.27
PHF3-209ENST00000509330 ASIC1P78348 528 aa16.76■□□□□ 0.27
PHF3-209ENST00000509330 PRAMEF18Q5VWM3 479 aa16.76■□□□□ 0.27
PHF3-209ENST00000509330 NELFBQ8WX92 580 aa16.76■□□□□ 0.27
PHF3-209ENST00000509330 TSC1Q92574 1164 aa16.76■□□□□ 0.27
PHF3-209ENST00000509330 SPTLC3Q9NUV7 552 aa16.76■□□□□ 0.27
PHF3-209ENST00000509330 FBXO28Q9NVF7 368 aa16.76■□□□□ 0.27
PHF3-209ENST00000509330 LAD1O00515 517 aa16.76■□□□□ 0.27
PHF3-209ENST00000509330 ZNF18P17022 549 aa16.76■□□□□ 0.27
PHF3-209ENST00000509330 PRPHP41219 470 aa16.76■□□□□ 0.27
PHF3-209ENST00000509330 UBXN2AP68543 259 aa16.76■□□□□ 0.27
PHF3-209ENST00000509330 FBXO11Q86XK2 927 aa16.76■□□□□ 0.27
PHF3-209ENST00000509330 SNX29Q8TEQ0 813 aa16.76■□□□□ 0.27
PHF3-209ENST00000509330 CPLX3Q8WVH0 158 aa16.76■□□□□ 0.27
PHF3-209ENST00000509330 MTMR8Q96EF0 704 aa16.76■□□□□ 0.27
PHF3-209ENST00000509330 CDK5RAP3Q96JB5 506 aa16.76■□□□□ 0.27
PHF3-209ENST00000509330 CBFA2T2O43439 604 aa16.75■□□□□ 0.27
PHF3-209ENST00000509330 SSBP05455 408 aaKnown RBP eCLIP16.75■□□□□ 0.27
PHF3-209ENST00000509330 CLK2P49760 499 aaKnown RBP16.75■□□□□ 0.27
PHF3-209ENST00000509330 ADKP55263 362 aaKnown RBP16.75■□□□□ 0.27
PHF3-209ENST00000509330 MCM6Q14566 821 aa16.75■□□□□ 0.27
PHF3-209ENST00000509330 MTMR9Q96QG7 549 aa16.75■□□□□ 0.27
PHF3-209ENST00000509330 ANO3Q9BYT9 981 aa16.75■□□□□ 0.27
PHF3-209ENST00000509330 CCSER1Q9C0I3 900 aa16.75■□□□□ 0.27
PHF3-209ENST00000509330 HERC5Q9UII4 1024 aaKnown RBP16.75■□□□□ 0.27
PHF3-209ENST00000509330 PRR12Q9ULL5 1215 aa16.75■□□□□ 0.27
PHF3-209ENST00000509330 NPM3O75607 178 aaKnown RBP16.75■□□□□ 0.27
PHF3-209ENST00000509330 STAT3P40763 770 aa16.75■□□□□ 0.27
PHF3-209ENST00000509330 PMS1P54277 932 aaKnown RBP16.75■□□□□ 0.27
PHF3-209ENST00000509330 RASA3Q14644 834 aa16.75■□□□□ 0.27
PHF3-209ENST00000509330 TBC1D5Q92609 795 aa16.75■□□□□ 0.27
PHF3-209ENST00000509330 AMNQ9BXJ7 453 aa16.75■□□□□ 0.27
PHF3-209ENST00000509330 PES1O00541 588 aaKnown RBP16.74■□□□□ 0.27
PHF3-209ENST00000509330 FCER1AP12319 257 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 ERCC5P28715 1186 aaPredicted RBP16.74■□□□□ 0.27
PHF3-209ENST00000509330 TMEM266Q2M3C6 531 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 SPATA1Q5VX52 437 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 VSTM4Q8IW00 320 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 CALML4Q96GE6 196 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 ARHGEF10LQ9HCE6 1279 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 UQCRHLA0A096LP55 91 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 MEIS2O14770 477 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 UQCRHP07919 91 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 ECM1Q16610 540 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 PPP4R3BQ5MIZ7 849 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 KCNK18Q7Z418 384 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 HAS1Q92839 578 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 GREB1LQ9C091 1923 aaPredicted RBP16.74■□□□□ 0.27
PHF3-209ENST00000509330 GSDMDP57764 484 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 RAD51AP2Q09MP3 1159 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 PAK1Q13153 545 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 GRB10Q13322 594 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 PRR16Q569H4 304 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 ZNF658Q5TYW1 1059 aaPredicted RBP16.74■□□□□ 0.27
PHF3-209ENST00000509330 IGSF22Q8N9C0 903 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 GMCL1P1Q8NEA9 526 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 FEZ1Q99689 392 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 PYM1Q9BRP8 204 aaKnown RBP16.74■□□□□ 0.27
PHF3-209ENST00000509330 MTFR1LQ9H019 292 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 VPS16Q9H269 839 aa16.74■□□□□ 0.27
PHF3-209ENST00000509330 SMCHD1A6NHR9 2005 aa16.73■□□□□ 0.27
PHF3-209ENST00000509330 CFBP00751 764 aa16.73■□□□□ 0.27
PHF3-209ENST00000509330 IDEP14735 1019 aa16.73■□□□□ 0.27
PHF3-209ENST00000509330 STAT2P52630 851 aa16.73■□□□□ 0.27
PHF3-209ENST00000509330 TGFB2P61812 414 aa16.73■□□□□ 0.27
PHF3-209ENST00000509330 PDE4DQ08499 809 aa16.73■□□□□ 0.27
PHF3-209ENST00000509330 PPP1R18Q6NYC8 613 aa16.73■□□□□ 0.27
PHF3-209ENST00000509330 AGBL3Q8NEM8 1001 aa16.73■□□□□ 0.27
PHF3-209ENST00000509330 NLGN2Q8NFZ4 835 aa16.73■□□□□ 0.27
PHF3-209ENST00000509330 KBTBD4Q9NVX7 518 aa16.73■□□□□ 0.27
PHF3-209ENST00000509330 TAB2Q9NYJ8 693 aa16.73■□□□□ 0.27
PHF3-209ENST00000509330 KLRC4O43908 158 aa16.73■□□□□ 0.27
PHF3-209ENST00000509330 ERCC3P19447 782 aa16.73■□□□□ 0.27
PHF3-209ENST00000509330 CACNB1Q02641 598 aaPredicted RBP16.73■□□□□ 0.27
PHF3-209ENST00000509330 CYP2W1Q8TAV3 490 aa16.73■□□□□ 0.27
PHF3-209ENST00000509330 GMCL1Q96IK5 515 aa16.73■□□□□ 0.27
PHF3-209ENST00000509330 PNMA5Q96PV4 448 aa16.73■□□□□ 0.27
PHF3-209ENST00000509330 PRELPP51888 382 aa16.72■□□□□ 0.27
PHF3-209ENST00000509330 MICALL2Q8IY33 904 aa16.72■□□□□ 0.27
PHF3-209ENST00000509330 AK8Q96MA6 479 aa16.72■□□□□ 0.27
PHF3-209ENST00000509330 TRIM9Q9C026 710 aa16.72■□□□□ 0.27
PHF3-209ENST00000509330 IMPACTQ9P2X3 320 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms