RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 NFKB1P19838 968 aa9.11□□□□□ -0.95
CCSER1-208ENST00000509109 INPP5BP32019 993 aa9.11□□□□□ -0.95
CCSER1-208ENST00000509109 RGS3P49796 1198 aa9.11□□□□□ -0.95
CCSER1-208ENST00000509109 TIMM10P62072 90 aa9.11□□□□□ -0.95
CCSER1-208ENST00000509109 NFIAQ12857 509 aa9.11□□□□□ -0.95
CCSER1-208ENST00000509109 OS9Q13438 667 aaPredicted RBP9.11□□□□□ -0.95
CCSER1-208ENST00000509109 SWI5Q1ZZU3 235 aa9.11□□□□□ -0.95
CCSER1-208ENST00000509109 NOL9Q5SY16 702 aaKnown RBP9.11□□□□□ -0.95
CCSER1-208ENST00000509109 MIGA2Q7L4E1 593 aa9.11□□□□□ -0.95
CCSER1-208ENST00000509109 KRT25Q7Z3Z0 450 aa9.11□□□□□ -0.95
CCSER1-208ENST00000509109 FAM43AQ8N2R8 423 aa9.11□□□□□ -0.95
CCSER1-208ENST00000509109 SPATA5Q8NB90 893 aa9.11□□□□□ -0.95
CCSER1-208ENST00000509109 NOL10Q9BSC4 688 aaKnown RBP9.11□□□□□ -0.95
CCSER1-208ENST00000509109 MKNK1Q9BUB5 465 aa9.11□□□□□ -0.95
CCSER1-208ENST00000509109 PICK1Q9NRD5 415 aa9.11□□□□□ -0.95
CCSER1-208ENST00000509109 ZNF112Q9UJU3 913 aa9.11□□□□□ -0.95
CCSER1-208ENST00000509109 PTPN22Q9Y2R2 807 aa9.11□□□□□ -0.95
CCSER1-208ENST00000509109 PTPRFP10586 1907 aa9.1□□□□□ -0.95
CCSER1-208ENST00000509109 IGSF3O75054 1194 aa9.1□□□□□ -0.95
CCSER1-208ENST00000509109 MICAL2O94851 1124 aa9.1□□□□□ -0.95
CCSER1-208ENST00000509109 PROCP04070 461 aa9.1□□□□□ -0.95
CCSER1-208ENST00000509109 ARID4AP29374 1257 aaPredicted RBP9.1□□□□□ -0.95
CCSER1-208ENST00000509109 BTDP43251 543 aa9.1□□□□□ -0.95
CCSER1-208ENST00000509109 PRMT2P55345 433 aa9.1□□□□□ -0.95
CCSER1-208ENST00000509109 CCINQ13939 588 aa9.1□□□□□ -0.95
CCSER1-208ENST00000509109 OCLNQ16625 522 aa9.1□□□□□ -0.95
CCSER1-208ENST00000509109 SLC9C1Q4G0N8 1177 aa9.1□□□□□ -0.95
CCSER1-208ENST00000509109 TMEM164Q5U3C3 297 aa9.1□□□□□ -0.95
CCSER1-208ENST00000509109 ANKRD23Q86SG2 305 aa9.1□□□□□ -0.95
CCSER1-208ENST00000509109 NBPF11Q86T75 865 aa9.1□□□□□ -0.95
CCSER1-208ENST00000509109 ALYREFQ86V81 257 aaKnown RBP9.1□□□□□ -0.95
CCSER1-208ENST00000509109 ARMC5Q96C12 935 aa9.1□□□□□ -0.95
CCSER1-208ENST00000509109 IFT43Q96FT9 208 aa9.1□□□□□ -0.95
CCSER1-208ENST00000509109 MYO19Q96H55 970 aa9.1□□□□□ -0.95
CCSER1-208ENST00000509109 PARK7Q99497 189 aaKnown RBP9.1□□□□□ -0.95
CCSER1-208ENST00000509109 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.1□□□□□ -0.95
CCSER1-208ENST00000509109 ATRNL1Q5VV63 1379 aa9.1□□□□□ -0.95
CCSER1-208ENST00000509109 ATAD5Q96QE3 1844 aa9.1□□□□□ -0.95
CCSER1-208ENST00000509109 KIAA0100Q14667 2235 aaKnown RBP9.09□□□□□ -0.95
CCSER1-208ENST00000509109 ZBED9Q6R2W3 1325 aa9.09□□□□□ -0.95
CCSER1-208ENST00000509109 BTBD19C9JJ37 291 aa9.09□□□□□ -0.95
CCSER1-208ENST00000509109 ATG7O95352 703 aa9.09□□□□□ -0.95
CCSER1-208ENST00000509109 EPB42P16452 691 aa9.09□□□□□ -0.95
CCSER1-208ENST00000509109 ARSDP51689 593 aa9.09□□□□□ -0.95
CCSER1-208ENST00000509109 MECOMQ03112 1051 aa9.09□□□□□ -0.95
CCSER1-208ENST00000509109 PICALMQ13492 652 aa9.09□□□□□ -0.95
CCSER1-208ENST00000509109 CCDC158Q5M9N0 1113 aa9.09□□□□□ -0.95
CCSER1-208ENST00000509109 COX20Q5RI15 118 aa9.09□□□□□ -0.95
CCSER1-208ENST00000509109 DIEXFQ68CQ4 756 aaKnown RBP9.09□□□□□ -0.95
CCSER1-208ENST00000509109 CAPN12Q6ZSI9 719 aa9.09□□□□□ -0.95
CCSER1-208ENST00000509109 FASTKD5Q7L8L6 764 aaKnown RBP9.09□□□□□ -0.95
CCSER1-208ENST00000509109 ITPRIPQ8IWB1 547 aa9.09□□□□□ -0.95
CCSER1-208ENST00000509109 SCYL3Q8IZE3 742 aa9.09□□□□□ -0.95
CCSER1-208ENST00000509109 MICALL1Q8N3F8 863 aa9.09□□□□□ -0.95
CCSER1-208ENST00000509109 TMEM57Q8N5G2 664 aa9.09□□□□□ -0.95
CCSER1-208ENST00000509109 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.09□□□□□ -0.95
CCSER1-208ENST00000509109 GPR108Q9NPR9 543 aa9.09□□□□□ -0.95
CCSER1-208ENST00000509109 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.09□□□□□ -0.95
CCSER1-208ENST00000509109 RAI14Q9P0K7 980 aa9.09□□□□□ -0.95
CCSER1-208ENST00000509109 HMG20BQ9P0W2 317 aa9.09□□□□□ -0.95
CCSER1-208ENST00000509109 LRP2BPQ9P2M1 347 aa9.09□□□□□ -0.95
CCSER1-208ENST00000509109 FOCADQ5VW36 1801 aa9.09□□□□□ -0.95
CCSER1-208ENST00000509109 GPR75-ASB3A0A0A6YYF3 556 aa9.08□□□□□ -0.96
CCSER1-208ENST00000509109 PNMA6EA0A0J9YXQ4 647 aa9.08□□□□□ -0.96
CCSER1-208ENST00000509109 PDHXO00330 501 aa9.08□□□□□ -0.96
CCSER1-208ENST00000509109 CXCL11O14625 94 aa9.08□□□□□ -0.96
CCSER1-208ENST00000509109 BAG3O95817 575 aa9.08□□□□□ -0.96
CCSER1-208ENST00000509109 LACTBP83111 547 aaPredicted RBP9.08□□□□□ -0.96
CCSER1-208ENST00000509109 TTC39AQ5SRH9 613 aa9.08□□□□□ -0.96
CCSER1-208ENST00000509109 SSH3Q8TE77 659 aa9.08□□□□□ -0.96
CCSER1-208ENST00000509109 PBXIP1Q96AQ6 731 aa9.08□□□□□ -0.96
CCSER1-208ENST00000509109 SAP130Q9H0E3 1048 aa9.08□□□□□ -0.96
CCSER1-208ENST00000509109 DNAJB12Q9NXW2 375 aaKnown RBP9.08□□□□□ -0.96
CCSER1-208ENST00000509109 SLC6A14Q9UN76 642 aa9.08□□□□□ -0.96
CCSER1-208ENST00000509109 PHIPQ8WWQ0 1821 aa9.08□□□□□ -0.96
CCSER1-208ENST00000509109 LOC285556D6RIA3 1793 aa9.07□□□□□ -0.96
CCSER1-208ENST00000509109 MGAMO43451 1857 aa9.07□□□□□ -0.96
CCSER1-208ENST00000509109 CDK5RAP2Q96SN8 1893 aa9.07□□□□□ -0.96
CCSER1-208ENST00000509109 C1QTNF9BB2RNN3 333 aa9.07□□□□□ -0.96
CCSER1-208ENST00000509109 FAM229AH3BQW9 127 aa9.07□□□□□ -0.96
CCSER1-208ENST00000509109 CTNND1O60716 968 aaKnown RBP9.07□□□□□ -0.96
CCSER1-208ENST00000509109 SURF6O75683 361 aaKnown RBP9.07□□□□□ -0.96
CCSER1-208ENST00000509109 HOXD10P28358 340 aa9.07□□□□□ -0.96
CCSER1-208ENST00000509109 CHRNA4P43681 627 aa9.07□□□□□ -0.96
CCSER1-208ENST00000509109 COL9A3Q14050 684 aaPredicted RBP9.07□□□□□ -0.96
CCSER1-208ENST00000509109 NAA30Q147X3 362 aaPredicted RBP9.07□□□□□ -0.96
CCSER1-208ENST00000509109 TNNI3KQ59H18 835 aa9.07□□□□□ -0.96
CCSER1-208ENST00000509109 TMED8Q6PL24 325 aaPredicted RBP9.07□□□□□ -0.96
CCSER1-208ENST00000509109 TREML1Q86YW5 311 aa9.07□□□□□ -0.96
CCSER1-208ENST00000509109 CERS3Q8IU89 383 aa9.07□□□□□ -0.96
CCSER1-208ENST00000509109 ERC1Q8IUD2 1116 aa9.07□□□□□ -0.96
CCSER1-208ENST00000509109 NUDT8Q8WV74 236 aa9.07□□□□□ -0.96
CCSER1-208ENST00000509109 NSUN4Q96CB9 384 aaKnown RBP9.07□□□□□ -0.96
CCSER1-208ENST00000509109 SLC45A1Q9Y2W3 748 aa9.07□□□□□ -0.96
CCSER1-208ENST00000509109 ZHX2Q9Y6X8 837 aa9.07□□□□□ -0.96
CCSER1-208ENST00000509109 FPGT-TNNI3KV9GXZ4 949 aa9.07□□□□□ -0.96
CCSER1-208ENST00000509109 ZSWIM8A7E2V4 1837 aa9.07□□□□□ -0.96
CCSER1-208ENST00000509109 A0A0G2JLL6 359 aaPredicted RBP9.06□□□□□ -0.96
CCSER1-208ENST00000509109 OPLAHO14841 1288 aa9.06□□□□□ -0.96
CCSER1-208ENST00000509109 SASH3O75995 380 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms