RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 AMNQ9BXJ7 453 aa21.71■■□□□ 1.07
UBE3D-207ENST00000509102 LSG1Q9H089 658 aaKnown RBP21.71■■□□□ 1.07
UBE3D-207ENST00000509102 UPF3AQ9H1J1 476 aaKnown RBP21.71■■□□□ 1.07
UBE3D-207ENST00000509102 JMJD4Q9H9V9 463 aa21.71■■□□□ 1.07
UBE3D-207ENST00000509102 ZEB2O60315 1214 aa21.7■■□□□ 1.06
UBE3D-207ENST00000509102 MCM5P33992 734 aa21.7■■□□□ 1.06
UBE3D-207ENST00000509102 CHST3Q7LGC8 479 aa21.7■■□□□ 1.06
UBE3D-207ENST00000509102 TLK2Q86UE8 772 aa21.7■■□□□ 1.06
UBE3D-207ENST00000509102 PURBQ96QR8 312 aaKnown RBP21.7■■□□□ 1.06
UBE3D-207ENST00000509102 MTA3Q9BTC8 594 aa21.7■■□□□ 1.06
UBE3D-207ENST00000509102 ASTN1O14525 1302 aa21.7■■□□□ 1.06
UBE3D-207ENST00000509102 CDC45O75419 566 aa21.69■■□□□ 1.06
UBE3D-207ENST00000509102 MDM2Q00987 491 aaPredicted RBP21.69■■□□□ 1.06
UBE3D-207ENST00000509102 GRM4Q14833 912 aa21.69■■□□□ 1.06
UBE3D-207ENST00000509102 STOX1Q6ZVD7 989 aa21.69■■□□□ 1.06
UBE3D-207ENST00000509102 MB21D2Q8IYB1 491 aaPredicted RBP21.69■■□□□ 1.06
UBE3D-207ENST00000509102 STAG2Q8N3U4 1231 aa21.69■■□□□ 1.06
UBE3D-207ENST00000509102 MAD2L2Q9UI95 211 aa21.69■■□□□ 1.06
UBE3D-207ENST00000509102 Q9Y3F1 56 aa21.69■■□□□ 1.06
UBE3D-207ENST00000509102 TAF6LQ9Y6J9 622 aa21.69■■□□□ 1.06
UBE3D-207ENST00000509102 ELP1O95163 1332 aa21.69■■□□□ 1.06
UBE3D-207ENST00000509102 MROH7Q68CQ1 1323 aa21.69■■□□□ 1.06
UBE3D-207ENST00000509102 RANBP2P49792 3224 aaKnown RBP21.68■■□□□ 1.06
UBE3D-207ENST00000509102 PALM3A6NDB9 673 aaPredicted RBP21.68■■□□□ 1.06
UBE3D-207ENST00000509102 DCDC2CA8MYV0 355 aa21.68■■□□□ 1.06
UBE3D-207ENST00000509102 ZBTB5O15062 677 aa21.68■■□□□ 1.06
UBE3D-207ENST00000509102 ADCY6O43306 1168 aa21.68■■□□□ 1.06
UBE3D-207ENST00000509102 PQBP1O60828 265 aaKnown RBP21.68■■□□□ 1.06
UBE3D-207ENST00000509102 ASGR1P07306 291 aa21.68■■□□□ 1.06
UBE3D-207ENST00000509102 TLE2Q04725 743 aa21.68■■□□□ 1.06
UBE3D-207ENST00000509102 NFXL1Q6ZNB6 911 aa21.68■■□□□ 1.06
UBE3D-207ENST00000509102 TMTC2Q8N394 836 aa21.68■■□□□ 1.06
UBE3D-207ENST00000509102 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.67■■□□□ 1.06
UBE3D-207ENST00000509102 MYADML2A6NDP7 307 aa21.67■■□□□ 1.06
UBE3D-207ENST00000509102 SLC27A2O14975 620 aa21.67■■□□□ 1.06
UBE3D-207ENST00000509102 DYNC1LI2O43237 492 aaPredicted RBP21.67■■□□□ 1.06
UBE3D-207ENST00000509102 PRC1O43663 620 aa21.67■■□□□ 1.06
UBE3D-207ENST00000509102 CLTBP09497 229 aa21.67■■□□□ 1.06
UBE3D-207ENST00000509102 SMPD1P17405 629 aa21.67■■□□□ 1.06
UBE3D-207ENST00000509102 KIF5BP33176 963 aa21.67■■□□□ 1.06
UBE3D-207ENST00000509102 FSCN1Q16658 493 aaKnown RBP21.67■■□□□ 1.06
UBE3D-207ENST00000509102 CREB3L3Q68CJ9 461 aa21.67■■□□□ 1.06
UBE3D-207ENST00000509102 CCSAPQ6IQ19 270 aaPredicted RBP21.67■■□□□ 1.06
UBE3D-207ENST00000509102 TAPT1Q6NXT6 567 aa21.67■■□□□ 1.06
UBE3D-207ENST00000509102 TDHQ8IZJ6 230 aa21.67■■□□□ 1.06
UBE3D-207ENST00000509102 CTCFLQ8NI51 663 aaPredicted RBP21.67■■□□□ 1.06
UBE3D-207ENST00000509102 TMEM87BQ96K49 555 aa21.67■■□□□ 1.06
UBE3D-207ENST00000509102 RNF39Q9H2S5 420 aa21.67■■□□□ 1.06
UBE3D-207ENST00000509102 GNEQ9Y223 722 aaKnown RBP21.67■■□□□ 1.06
UBE3D-207ENST00000509102 CCDC69A6NI79 296 aa21.66■■□□□ 1.06
UBE3D-207ENST00000509102 CABYRO75952 493 aa21.66■■□□□ 1.06
UBE3D-207ENST00000509102 NKX3-2P78367 333 aa21.66■■□□□ 1.06
UBE3D-207ENST00000509102 BRDTQ58F21 947 aaPredicted RBP21.66■■□□□ 1.06
UBE3D-207ENST00000509102 SKAP1Q86WV1 359 aa21.66■■□□□ 1.06
UBE3D-207ENST00000509102 HOMER1Q86YM7 354 aa21.66■■□□□ 1.06
UBE3D-207ENST00000509102 IGDCC4Q8TDY8 1250 aa21.66■■□□□ 1.06
UBE3D-207ENST00000509102 NSUN6Q8TEA1 469 aaKnown RBP21.66■■□□□ 1.06
UBE3D-207ENST00000509102 TOX2Q96NM4 488 aa21.66■■□□□ 1.06
UBE3D-207ENST00000509102 WDR11Q9BZH6 1224 aa21.66■■□□□ 1.06
UBE3D-207ENST00000509102 PDLIM7Q9NR12 457 aa21.66■■□□□ 1.06
UBE3D-207ENST00000509102 PDGFCQ9NRA1 345 aa21.66■■□□□ 1.06
UBE3D-207ENST00000509102 PCDHA1Q9Y5I3 950 aa21.66■■□□□ 1.06
UBE3D-207ENST00000509102 DDX49Q9Y6V7 483 aaKnown RBP21.66■■□□□ 1.06
UBE3D-207ENST00000509102 A0A0U1RQG5 324 aaPredicted RBP21.65■■□□□ 1.06
UBE3D-207ENST00000509102 DDAH1O94760 285 aa21.65■■□□□ 1.06
UBE3D-207ENST00000509102 ANTXR2P58335 489 aa21.65■■□□□ 1.06
UBE3D-207ENST00000509102 TROAPQ12815 778 aa21.65■■□□□ 1.06
UBE3D-207ENST00000509102 PPP2R5BQ15173 497 aa21.65■■□□□ 1.06
UBE3D-207ENST00000509102 NECTIN1Q15223 517 aa21.65■■□□□ 1.06
UBE3D-207ENST00000509102 DUSP28Q4G0W2 176 aa21.65■■□□□ 1.06
UBE3D-207ENST00000509102 SCFD2Q8WU76 684 aa21.65■■□□□ 1.06
UBE3D-207ENST00000509102 MAP3K14Q99558 947 aa21.65■■□□□ 1.06
UBE3D-207ENST00000509102 LRRC37A2A6NM11 1700 aa21.65■■□□□ 1.06
UBE3D-207ENST00000509102 MYH6P13533 1939 aa21.65■■□□□ 1.06
UBE3D-207ENST00000509102 NKRFO15226 690 aaKnown RBP eCLIP21.64■■□□□ 1.05
UBE3D-207ENST00000509102 CFBP00751 764 aa21.64■■□□□ 1.05
UBE3D-207ENST00000509102 EDNRBP24530 442 aa21.64■■□□□ 1.05
UBE3D-207ENST00000509102 BEX3Q00994 111 aa21.64■■□□□ 1.05
UBE3D-207ENST00000509102 ARHGEF16Q5VV41 709 aa21.64■■□□□ 1.05
UBE3D-207ENST00000509102 ANKRD33Q7Z3H0 272 aa21.64■■□□□ 1.05
UBE3D-207ENST00000509102 ZNF654Q8IZM8 581 aa21.64■■□□□ 1.05
UBE3D-207ENST00000509102 SAMD3Q8N6K7 520 aa21.64■■□□□ 1.05
UBE3D-207ENST00000509102 SYTL5Q8TDW5 730 aaPredicted RBP21.64■■□□□ 1.05
UBE3D-207ENST00000509102 MTMR8Q96EF0 704 aa21.64■■□□□ 1.05
UBE3D-207ENST00000509102 IWS1Q96ST2 819 aa21.64■■□□□ 1.05
UBE3D-207ENST00000509102 RMDN3Q96TC7 470 aa21.64■■□□□ 1.05
UBE3D-207ENST00000509102 RIOX1Q9H6W3 641 aa21.64■■□□□ 1.05
UBE3D-207ENST00000509102 LY9Q9HBG7 655 aa21.64■■□□□ 1.05
UBE3D-207ENST00000509102 TMEM39AQ9NV64 488 aa21.64■■□□□ 1.05
UBE3D-207ENST00000509102 MAP3K20Q9NYL2 800 aaKnown RBP21.64■■□□□ 1.05
UBE3D-207ENST00000509102 LCTP09848 1927 aa21.64■■□□□ 1.05
UBE3D-207ENST00000509102 TLR3O15455 904 aaKnown RBP21.63■■□□□ 1.05
UBE3D-207ENST00000509102 CALM1P0DP23 149 aa21.63■■□□□ 1.05
UBE3D-207ENST00000509102 CALM2P0DP24 149 aa21.63■■□□□ 1.05
UBE3D-207ENST00000509102 CALM3P0DP25 149 aa21.63■■□□□ 1.05
UBE3D-207ENST00000509102 RAG1P15918 1043 aa21.63■■□□□ 1.05
UBE3D-207ENST00000509102 GNAQP50148 359 aa21.63■■□□□ 1.05
UBE3D-207ENST00000509102 CPT1AP50416 773 aa21.63■■□□□ 1.05
UBE3D-207ENST00000509102 LZTS2Q9BRK4 669 aa21.63■■□□□ 1.05
UBE3D-207ENST00000509102 SEZ6LQ9BYH1 1024 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms