RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 PTPRN2Q92932 1015 aa8.67□□□□□ -1.02
GYPB-210ENST00000508841 NCOA5Q9HCD5 579 aaKnown RBP8.67□□□□□ -1.02
GYPB-210ENST00000508841 PLAAQ9Y263 795 aa8.67□□□□□ -1.02
GYPB-210ENST00000508841 FITM1A5D6W6 292 aa8.66□□□□□ -1.02
GYPB-210ENST00000508841 RFPL3O75679 317 aa8.66□□□□□ -1.02
GYPB-210ENST00000508841 ASMTLO95671 621 aa8.66□□□□□ -1.02
GYPB-210ENST00000508841 PLS3P13797 630 aa8.66□□□□□ -1.02
GYPB-210ENST00000508841 LTBRP36941 435 aa8.66□□□□□ -1.02
GYPB-210ENST00000508841 CYP4F3Q08477 520 aa8.66□□□□□ -1.02
GYPB-210ENST00000508841 EGFLAMQ63HQ2 1017 aa8.66□□□□□ -1.02
GYPB-210ENST00000508841 NFXL1Q6ZNB6 911 aa8.66□□□□□ -1.02
GYPB-210ENST00000508841 USP53Q70EK8 1073 aa8.66□□□□□ -1.02
GYPB-210ENST00000508841 KIAA0907Q7Z7F0 614 aaPredicted RBP8.66□□□□□ -1.02
GYPB-210ENST00000508841 DIO2Q92813 273 aa8.66□□□□□ -1.02
GYPB-210ENST00000508841 GPRC5CQ9NQ84 441 aa8.66□□□□□ -1.02
GYPB-210ENST00000508841 CLEC1BQ9P126 229 aa8.66□□□□□ -1.02
GYPB-210ENST00000508841 NPFFR2Q9Y5X5 522 aa8.66□□□□□ -1.02
GYPB-210ENST00000508841 AQP7O14520 342 aa8.65□□□□□ -1.02
GYPB-210ENST00000508841 MYO1BO43795 1136 aa8.65□□□□□ -1.02
GYPB-210ENST00000508841 RAC2P15153 192 aa8.65□□□□□ -1.02
GYPB-210ENST00000508841 GDNFP39905 211 aa8.65□□□□□ -1.02
GYPB-210ENST00000508841 GTF2A2P52657 109 aa8.65□□□□□ -1.02
GYPB-210ENST00000508841 NR0B2Q15466 257 aa8.65□□□□□ -1.02
GYPB-210ENST00000508841 PRSS53Q2L4Q9 553 aa8.65□□□□□ -1.02
GYPB-210ENST00000508841 TRIM61Q5EBN2 209 aa8.65□□□□□ -1.02
GYPB-210ENST00000508841 STYK1Q6J9G0 422 aa8.65□□□□□ -1.02
GYPB-210ENST00000508841 JAMLQ86YT9 394 aa8.65□□□□□ -1.02
GYPB-210ENST00000508841 G6PC3Q9BUM1 346 aa8.65□□□□□ -1.02
GYPB-210ENST00000508841 ADAMTS10Q9H324 1103 aa8.65□□□□□ -1.02
GYPB-210ENST00000508841 GPR27Q9NS67 375 aa8.65□□□□□ -1.02
GYPB-210ENST00000508841 SFMBT1Q9UHJ3 866 aa8.65□□□□□ -1.02
GYPB-210ENST00000508841 OAS3Q9Y6K5 1087 aaKnown RBP8.65□□□□□ -1.02
GYPB-210ENST00000508841 WTIPA6NIX2 430 aaPredicted RBP8.64□□□□□ -1.03
GYPB-210ENST00000508841 FADS2P1A8MWK0 482 aa8.64□□□□□ -1.03
GYPB-210ENST00000508841 CORO7P57737 925 aa8.64□□□□□ -1.03
GYPB-210ENST00000508841 RALGPS1Q5JS13 557 aa8.64□□□□□ -1.03
GYPB-210ENST00000508841 ZPBP2Q6X784 338 aa8.64□□□□□ -1.03
GYPB-210ENST00000508841 LILRA2Q8N149 483 aa8.64□□□□□ -1.03
GYPB-210ENST00000508841 KCNQ2O43526 872 aa8.63□□□□□ -1.03
GYPB-210ENST00000508841 NPHS1O60500 1241 aa8.63□□□□□ -1.03
GYPB-210ENST00000508841 GP2P55259 537 aaKnown RBP8.63□□□□□ -1.03
GYPB-210ENST00000508841 LAPTM5Q13571 262 aa8.63□□□□□ -1.03
GYPB-210ENST00000508841 SLC14A2Q15849 920 aa8.63□□□□□ -1.03
GYPB-210ENST00000508841 GALNT18Q6P9A2 607 aa8.63□□□□□ -1.03
GYPB-210ENST00000508841 HHIPL1Q96JK4 782 aa8.63□□□□□ -1.03
GYPB-210ENST00000508841 C6orf222P0C671 652 aaPredicted RBP8.62□□□□□ -1.03
GYPB-210ENST00000508841 NTRK3Q16288 839 aa8.62□□□□□ -1.03
GYPB-210ENST00000508841 CEP128Q6ZU80 1094 aa8.62□□□□□ -1.03
GYPB-210ENST00000508841 SLCO6A1Q86UG4 719 aa8.62□□□□□ -1.03
GYPB-210ENST00000508841 IFNL3Q8IZI9 196 aa8.62□□□□□ -1.03
GYPB-210ENST00000508841 FAM177A1Q8N128 213 aaPredicted RBP8.62□□□□□ -1.03
GYPB-210ENST00000508841 TMEM52Q8NDY8 209 aa8.62□□□□□ -1.03
GYPB-210ENST00000508841 NLGN2Q8NFZ4 835 aa8.62□□□□□ -1.03
GYPB-210ENST00000508841 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.62□□□□□ -1.03
GYPB-210ENST00000508841 PRKAB1Q9Y478 270 aa8.62□□□□□ -1.03
GYPB-210ENST00000508841 TAF6LQ9Y6J9 622 aa8.62□□□□□ -1.03
GYPB-210ENST00000508841 A0A1W2PQ27 194 aa8.61□□□□□ -1.03
GYPB-210ENST00000508841 A0A1W2PQ64 194 aa8.61□□□□□ -1.03
GYPB-210ENST00000508841 A0A1W2PQC6 194 aa8.61□□□□□ -1.03
GYPB-210ENST00000508841 A0A1W2PQD8 194 aa8.61□□□□□ -1.03
GYPB-210ENST00000508841 NRDCO43847 1150 aa8.61□□□□□ -1.03
GYPB-210ENST00000508841 HPXP02790 462 aa8.61□□□□□ -1.03
GYPB-210ENST00000508841 RNASE1P07998 156 aaKnown RBP8.61□□□□□ -1.03
GYPB-210ENST00000508841 HK2P52789 917 aa8.61□□□□□ -1.03
GYPB-210ENST00000508841 RTP1P59025 263 aa8.61□□□□□ -1.03
GYPB-210ENST00000508841 GPR85P60893 370 aa8.61□□□□□ -1.03
GYPB-210ENST00000508841 SNX17Q15036 470 aa8.61□□□□□ -1.03
GYPB-210ENST00000508841 ZNF792Q3KQV3 632 aa8.61□□□□□ -1.03
GYPB-210ENST00000508841 DENND5AQ6IQ26 1287 aa8.61□□□□□ -1.03
GYPB-210ENST00000508841 PHF20Q9BVI0 1012 aa8.61□□□□□ -1.03
GYPB-210ENST00000508841 RC3H2Q9HBD1 1191 aaKnown RBP8.61□□□□□ -1.03
GYPB-210ENST00000508841 PRDM7Q9NQW5 492 aa8.61□□□□□ -1.03
GYPB-210ENST00000508841 MBNL3Q9NUK0 354 aaKnown RBP8.61□□□□□ -1.03
GYPB-210ENST00000508841 ADAMTS4O75173 837 aa8.6□□□□□ -1.03
GYPB-210ENST00000508841 USP2O75604 605 aaPredicted RBP8.6□□□□□ -1.03
GYPB-210ENST00000508841 RPL11P62913 178 aaKnown RBP8.6□□□□□ -1.03
GYPB-210ENST00000508841 GSTCDQ8NEC7 633 aa8.6□□□□□ -1.03
GYPB-210ENST00000508841 NINJ1Q92982 152 aa8.6□□□□□ -1.03
GYPB-210ENST00000508841 INTS7Q9NVH2 962 aaKnown RBP8.6□□□□□ -1.03
GYPB-210ENST00000508841 NDOR1Q9UHB4 597 aa8.6□□□□□ -1.03
GYPB-210ENST00000508841 CD2APQ9Y5K6 639 aa8.6□□□□□ -1.03
GYPB-210ENST00000508841 TIMM13Q9Y5L4 95 aaPredicted RBP8.6□□□□□ -1.03
GYPB-210ENST00000508841 PPP1R12AO14974 1030 aaPredicted RBP8.59□□□□□ -1.03
GYPB-210ENST00000508841 AFMP43652 599 aa8.59□□□□□ -1.03
GYPB-210ENST00000508841 PABPC4Q13310 644 aaKnown RBP eCLIP8.59□□□□□ -1.03
GYPB-210ENST00000508841 KIZQ2M2Z5 673 aa8.59□□□□□ -1.03
GYPB-210ENST00000508841 HSF5Q4G112 596 aaPredicted RBP8.59□□□□□ -1.03
GYPB-210ENST00000508841 CPNE8Q86YQ8 564 aa8.59□□□□□ -1.03
GYPB-210ENST00000508841 CCDC103Q8IW40 242 aa8.59□□□□□ -1.03
GYPB-210ENST00000508841 FLAD1Q8NFF5 587 aa8.59□□□□□ -1.03
GYPB-210ENST00000508841 ASIC4Q96FT7 647 aa8.59□□□□□ -1.03
GYPB-210ENST00000508841 KRTAP4-9Q9BYQ8 210 aa8.59□□□□□ -1.03
GYPB-210ENST00000508841 EBF1Q9UH73 591 aa8.59□□□□□ -1.03
GYPB-210ENST00000508841 TMEFF2Q9UIK5 374 aaPredicted RBP8.59□□□□□ -1.03
GYPB-210ENST00000508841 ADAMTS6Q9UKP5 1117 aa8.59□□□□□ -1.03
GYPB-210ENST00000508841 CTNND2Q9UQB3 1225 aa8.59□□□□□ -1.03
GYPB-210ENST00000508841 BLACEA4D250 179 aa8.58□□□□□ -1.04
GYPB-210ENST00000508841 C7orf72A4D263 438 aa8.58□□□□□ -1.04
GYPB-210ENST00000508841 TKFCQ3LXA3 575 aa8.58□□□□□ -1.04
GYPB-210ENST00000508841 RCBTB1Q8NDN9 531 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms