RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 PFASO15067 1338 aa12.62□□□□□ -0.39
BRCC3P1-201ENST00000508559 ECM2O94769 699 aaPredicted RBP12.61□□□□□ -0.39
BRCC3P1-201ENST00000508559 BRD1O95696 1058 aa12.61□□□□□ -0.39
BRCC3P1-201ENST00000508559 F13A1P00488 732 aa12.61□□□□□ -0.39
BRCC3P1-201ENST00000508559 FOSP01100 380 aaPredicted RBP12.61□□□□□ -0.39
BRCC3P1-201ENST00000508559 FCER1AP12319 257 aa12.61□□□□□ -0.39
BRCC3P1-201ENST00000508559 MAPK4P31152 587 aa12.61□□□□□ -0.39
BRCC3P1-201ENST00000508559 HOXA13P31271 388 aaPredicted RBP12.61□□□□□ -0.39
BRCC3P1-201ENST00000508559 MAP2K1Q02750 393 aaPredicted RBP12.61□□□□□ -0.39
BRCC3P1-201ENST00000508559 NR5A1Q13285 461 aa12.61□□□□□ -0.39
BRCC3P1-201ENST00000508559 KIF22Q14807 665 aa12.61□□□□□ -0.39
BRCC3P1-201ENST00000508559 Q3C1V9 767 aa12.61□□□□□ -0.39
BRCC3P1-201ENST00000508559 FOXD4L6Q3SYB3 417 aaPredicted RBP12.61□□□□□ -0.39
BRCC3P1-201ENST00000508559 USP17L6PQ6QN14 398 aa12.61□□□□□ -0.39
BRCC3P1-201ENST00000508559 FOXD4L3Q6VB84 417 aaPredicted RBP12.61□□□□□ -0.39
BRCC3P1-201ENST00000508559 NOSTRINQ8IVI9 506 aa12.61□□□□□ -0.39
BRCC3P1-201ENST00000508559 TEX2Q8IWB9 1127 aa12.61□□□□□ -0.39
BRCC3P1-201ENST00000508559 SAMD3Q8N6K7 520 aa12.61□□□□□ -0.39
BRCC3P1-201ENST00000508559 RASGRP4Q8TDF6 673 aa12.61□□□□□ -0.39
BRCC3P1-201ENST00000508559 OXER1Q8TDS5 423 aa12.61□□□□□ -0.39
BRCC3P1-201ENST00000508559 MMP19Q99542 508 aa12.61□□□□□ -0.39
BRCC3P1-201ENST00000508559 POTEB2H3BUK9 544 aa12.6□□□□□ -0.39
BRCC3P1-201ENST00000508559 TBC1D8O95759 1140 aa12.6□□□□□ -0.39
BRCC3P1-201ENST00000508559 ATP2B1P20020 1258 aa12.6□□□□□ -0.39
BRCC3P1-201ENST00000508559 AP3B2Q13367 1082 aa12.6□□□□□ -0.39
BRCC3P1-201ENST00000508559 PKP1Q13835 747 aa12.6□□□□□ -0.39
BRCC3P1-201ENST00000508559 BAATQ14032 418 aaPredicted RBP12.6□□□□□ -0.39
BRCC3P1-201ENST00000508559 NONOQ15233 471 aaKnown RBP eCLIP12.6□□□□□ -0.39
BRCC3P1-201ENST00000508559 PIK3AP1Q6ZUJ8 805 aa12.6□□□□□ -0.39
BRCC3P1-201ENST00000508559 PLEKHH3Q7Z736 793 aa12.6□□□□□ -0.39
BRCC3P1-201ENST00000508559 CLEC4DQ8WXI8 215 aa12.6□□□□□ -0.39
BRCC3P1-201ENST00000508559 ZNF396Q96N95 335 aaPredicted RBP12.6□□□□□ -0.39
BRCC3P1-201ENST00000508559 EFCC1Q9HA90 598 aa12.6□□□□□ -0.39
BRCC3P1-201ENST00000508559 TMEM260Q9NX78 707 aa12.6□□□□□ -0.39
BRCC3P1-201ENST00000508559 RNF186Q9NXI6 227 aa12.6□□□□□ -0.39
BRCC3P1-201ENST00000508559 MAP3K20Q9NYL2 800 aaKnown RBP12.6□□□□□ -0.39
BRCC3P1-201ENST00000508559 PCDHA6Q9UN73 950 aa12.6□□□□□ -0.39
BRCC3P1-201ENST00000508559 PCDHA8Q9Y5H6 950 aa12.6□□□□□ -0.39
BRCC3P1-201ENST00000508559 RLFQ13129 1914 aa12.59□□□□□ -0.39
BRCC3P1-201ENST00000508559 B4DLN1 442 aa12.59□□□□□ -0.39
BRCC3P1-201ENST00000508559 BCRP11274 1271 aa12.59□□□□□ -0.39
BRCC3P1-201ENST00000508559 NCLP19338 710 aaKnown RBP12.59□□□□□ -0.39
BRCC3P1-201ENST00000508559 DDIT3P35638 169 aa12.59□□□□□ -0.39
BRCC3P1-201ENST00000508559 ZNF76P36508 570 aa12.59□□□□□ -0.39
BRCC3P1-201ENST00000508559 RPS6P62753 249 aaKnown RBP12.59□□□□□ -0.39
BRCC3P1-201ENST00000508559 RESTQ13127 1097 aa12.59□□□□□ -0.39
BRCC3P1-201ENST00000508559 POTEEQ6S8J3 1075 aa12.59□□□□□ -0.39
BRCC3P1-201ENST00000508559 C17orf99Q6UX52 265 aa12.59□□□□□ -0.39
BRCC3P1-201ENST00000508559 TBC1D5Q92609 795 aa12.59□□□□□ -0.39
BRCC3P1-201ENST00000508559 SHISA4Q96DD7 197 aa12.59□□□□□ -0.39
BRCC3P1-201ENST00000508559 MPHOSPH6Q99547 160 aaKnown RBP12.59□□□□□ -0.39
BRCC3P1-201ENST00000508559 MAF1Q9H063 256 aa12.59□□□□□ -0.39
BRCC3P1-201ENST00000508559 PORCNQ9H237 461 aa12.59□□□□□ -0.39
BRCC3P1-201ENST00000508559 SLC5A4Q9NY91 659 aa12.59□□□□□ -0.39
BRCC3P1-201ENST00000508559 COL11A1P12107 1806 aaPredicted RBP12.58□□□□□ -0.4
BRCC3P1-201ENST00000508559 PARP14Q460N5 1801 aa12.58□□□□□ -0.4
BRCC3P1-201ENST00000508559 KIF28PB7ZC32 967 aa12.58□□□□□ -0.4
BRCC3P1-201ENST00000508559 PIK3CDO00329 1044 aa12.58□□□□□ -0.4
BRCC3P1-201ENST00000508559 MEIS2O14770 477 aa12.58□□□□□ -0.4
BRCC3P1-201ENST00000508559 TNPO2O14787 897 aaKnown RBP12.58□□□□□ -0.4
BRCC3P1-201ENST00000508559 OPLAHO14841 1288 aa12.58□□□□□ -0.4
BRCC3P1-201ENST00000508559 STRNO43815 780 aa12.58□□□□□ -0.4
BRCC3P1-201ENST00000508559 U2AF2P26368 475 aaKnown RBP eCLIP12.58□□□□□ -0.4
BRCC3P1-201ENST00000508559 HSD17B4P51659 736 aa12.58□□□□□ -0.4
BRCC3P1-201ENST00000508559 FCGRTP55899 365 aa12.58□□□□□ -0.4
BRCC3P1-201ENST00000508559 ARHGEF16Q5VV41 709 aa12.58□□□□□ -0.4
BRCC3P1-201ENST00000508559 SLC30A10Q6XR72 485 aa12.58□□□□□ -0.4
BRCC3P1-201ENST00000508559 DPP9Q86TI2 863 aa12.58□□□□□ -0.4
BRCC3P1-201ENST00000508559 SYTL5Q8TDW5 730 aaPredicted RBP12.58□□□□□ -0.4
BRCC3P1-201ENST00000508559 PGBD1Q96JS3 809 aa12.58□□□□□ -0.4
BRCC3P1-201ENST00000508559 ANO3Q9BYT9 981 aa12.58□□□□□ -0.4
BRCC3P1-201ENST00000508559 A1CFQ9NQ94 594 aaKnown RBP12.58□□□□□ -0.4
BRCC3P1-201ENST00000508559 CYP39A1Q9NYL5 469 aa12.58□□□□□ -0.4
BRCC3P1-201ENST00000508559 ADD3Q9UEY8 706 aaKnown RBP12.58□□□□□ -0.4
BRCC3P1-201ENST00000508559 ADGRA2Q96PE1 1338 aa12.58□□□□□ -0.4
BRCC3P1-201ENST00000508559 SP3Q02447 781 aa12.57□□□□□ -0.4
BRCC3P1-201ENST00000508559 ARHGEF6Q15052 776 aa12.57□□□□□ -0.4
BRCC3P1-201ENST00000508559 NPY5RQ15761 445 aa12.57□□□□□ -0.4
BRCC3P1-201ENST00000508559 INF2Q27J81 1249 aa12.57□□□□□ -0.4
BRCC3P1-201ENST00000508559 GPR142Q7Z601 462 aa12.57□□□□□ -0.4
BRCC3P1-201ENST00000508559 NSUN6Q8TEA1 469 aaKnown RBP12.57□□□□□ -0.4
BRCC3P1-201ENST00000508559 TBCKQ8TEA7 893 aa12.57□□□□□ -0.4
BRCC3P1-201ENST00000508559 RMDN3Q96TC7 470 aa12.57□□□□□ -0.4
BRCC3P1-201ENST00000508559 NAP1L4Q99733 375 aaKnown RBP12.57□□□□□ -0.4
BRCC3P1-201ENST00000508559 SAGE1Q9NXZ1 904 aa12.57□□□□□ -0.4
BRCC3P1-201ENST00000508559 A0A0G2JMZ2 1700 aa12.57□□□□□ -0.4
BRCC3P1-201ENST00000508559 SLC15A5A6NIM6 579 aa12.56□□□□□ -0.4
BRCC3P1-201ENST00000508559 MARCH6O60337 910 aa12.56□□□□□ -0.4
BRCC3P1-201ENST00000508559 PGK2P07205 417 aa12.56□□□□□ -0.4
BRCC3P1-201ENST00000508559 MYCLP12524 364 aaPredicted RBP12.56□□□□□ -0.4
BRCC3P1-201ENST00000508559 EIF2AK2P19525 551 aaKnown RBP12.56□□□□□ -0.4
BRCC3P1-201ENST00000508559 PTPREP23469 700 aa12.56□□□□□ -0.4
BRCC3P1-201ENST00000508559 ADORA2AP29274 412 aa12.56□□□□□ -0.4
BRCC3P1-201ENST00000508559 CLK2P49760 499 aaKnown RBP12.56□□□□□ -0.4
BRCC3P1-201ENST00000508559 UBXN2AP68543 259 aa12.56□□□□□ -0.4
BRCC3P1-201ENST00000508559 LETM2Q2VYF4 491 aa12.56□□□□□ -0.4
BRCC3P1-201ENST00000508559 RILPL1Q5EBL4 403 aa12.56□□□□□ -0.4
BRCC3P1-201ENST00000508559 MYSM1Q5VVJ2 828 aa12.56□□□□□ -0.4
BRCC3P1-201ENST00000508559 NEK8Q86SG6 692 aa12.56□□□□□ -0.4
BRCC3P1-201ENST00000508559 ABRAQ8N0Z2 381 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms