RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 RPS6P62753 249 aaKnown RBP19■□□□□ 0.63
LMNA-222ENST00000508500 SEC23AQ15436 765 aa19■□□□□ 0.63
LMNA-222ENST00000508500 CCDC178Q5BJE1 867 aa19■□□□□ 0.63
LMNA-222ENST00000508500 IQSEC1Q6DN90 963 aa19■□□□□ 0.63
LMNA-222ENST00000508500 RNF207Q6ZRF8 634 aa19■□□□□ 0.63
LMNA-222ENST00000508500 TLK2Q86UE8 772 aa19■□□□□ 0.63
LMNA-222ENST00000508500 ADGRF4Q8IZF3 695 aa19■□□□□ 0.63
LMNA-222ENST00000508500 KAT14Q9H8E8 782 aa19■□□□□ 0.63
LMNA-222ENST00000508500 SPC25Q9HBM1 224 aa19■□□□□ 0.63
LMNA-222ENST00000508500 VTA1Q9NP79 307 aa19■□□□□ 0.63
LMNA-222ENST00000508500 TMEM39AQ9NV64 488 aa19■□□□□ 0.63
LMNA-222ENST00000508500 TBX21Q9UL17 535 aa19■□□□□ 0.63
LMNA-222ENST00000508500 SCN10AQ9Y5Y9 1956 aa19■□□□□ 0.63
LMNA-222ENST00000508500 GRIN2DO15399 1336 aa19■□□□□ 0.63
LMNA-222ENST00000508500 ARVCFO00192 962 aa18.99■□□□□ 0.63
LMNA-222ENST00000508500 DYNC1LI2O43237 492 aaPredicted RBP18.99■□□□□ 0.63
LMNA-222ENST00000508500 NEFLP07196 543 aa18.99■□□□□ 0.63
LMNA-222ENST00000508500 CYP21A2P08686 494 aa18.99■□□□□ 0.63
LMNA-222ENST00000508500 USH1GQ495M9 461 aa18.99■□□□□ 0.63
LMNA-222ENST00000508500 CXCL17Q6UXB2 119 aa18.99■□□□□ 0.63
LMNA-222ENST00000508500 KIAA1211Q6ZU35 1233 aa18.99■□□□□ 0.63
LMNA-222ENST00000508500 KRT23Q9C075 422 aa18.99■□□□□ 0.63
LMNA-222ENST00000508500 RAD50Q92878 1312 aa18.99■□□□□ 0.63
LMNA-222ENST00000508500 VCANP13611 3396 aa18.98■□□□□ 0.63
LMNA-222ENST00000508500 A0A0U1RQG5 324 aaPredicted RBP18.98■□□□□ 0.63
LMNA-222ENST00000508500 RBM47A0AV96 593 aaKnown RBP18.98■□□□□ 0.63
LMNA-222ENST00000508500 DCDC2CA8MYV0 355 aa18.98■□□□□ 0.63
LMNA-222ENST00000508500 RAG1P15918 1043 aa18.98■□□□□ 0.63
LMNA-222ENST00000508500 EDNRBP24530 442 aa18.98■□□□□ 0.63
LMNA-222ENST00000508500 CDC37Q16543 378 aaPredicted RBP18.98■□□□□ 0.63
LMNA-222ENST00000508500 NOL8Q76FK4 1167 aaKnown RBP18.98■□□□□ 0.63
LMNA-222ENST00000508500 FAM126BQ8IXS8 530 aa18.98■□□□□ 0.63
LMNA-222ENST00000508500 STAG2Q8N3U4 1231 aa18.98■□□□□ 0.63
LMNA-222ENST00000508500 SLC43A3Q8NBI5 491 aa18.98■□□□□ 0.63
LMNA-222ENST00000508500 CNNM2Q9H8M5 875 aa18.98■□□□□ 0.63
LMNA-222ENST00000508500 ADD3Q9UEY8 706 aaKnown RBP18.98■□□□□ 0.63
LMNA-222ENST00000508500 GBF1Q92538 1859 aa18.98■□□□□ 0.63
LMNA-222ENST00000508500 LOC102724159A0A0B4J2E5 919 aa18.97■□□□□ 0.63
LMNA-222ENST00000508500 CD4P01730 458 aa18.97■□□□□ 0.63
LMNA-222ENST00000508500 PWP2Q15269 919 aaKnown RBP18.97■□□□□ 0.63
LMNA-222ENST00000508500 FSCN1Q16658 493 aaKnown RBP18.97■□□□□ 0.63
LMNA-222ENST00000508500 QRICH1Q2TAL8 776 aa18.97■□□□□ 0.63
LMNA-222ENST00000508500 DUSP28Q4G0W2 176 aa18.97■□□□□ 0.63
LMNA-222ENST00000508500 ASPRV1Q53RT3 343 aa18.97■□□□□ 0.63
LMNA-222ENST00000508500 ERICH6BQ5W0A0 696 aa18.97■□□□□ 0.63
LMNA-222ENST00000508500 VTI1AQ96AJ9 217 aa18.97■□□□□ 0.63
LMNA-222ENST00000508500 COL25A1Q9BXS0 654 aaPredicted RBP18.97■□□□□ 0.63
LMNA-222ENST00000508500 TTYH1Q9H313 450 aaPredicted RBP18.97■□□□□ 0.63
LMNA-222ENST00000508500 JMJD4Q9H9V9 463 aa18.97■□□□□ 0.63
LMNA-222ENST00000508500 SENP2Q9HC62 589 aa18.97■□□□□ 0.63
LMNA-222ENST00000508500 COL20A1Q9P218 1284 aa18.97■□□□□ 0.63
LMNA-222ENST00000508500 Q9Y3F1 56 aa18.97■□□□□ 0.63
LMNA-222ENST00000508500 TRIP12Q14669 1992 aaPredicted RBP18.97■□□□□ 0.63
LMNA-222ENST00000508500 SCN5AQ14524 2016 aa18.96■□□□□ 0.63
LMNA-222ENST00000508500 SGSM2O43147 1006 aa18.96■□□□□ 0.63
LMNA-222ENST00000508500 TIMP1P01033 207 aa18.96■□□□□ 0.63
LMNA-222ENST00000508500 SMAD3P84022 425 aaKnown RBP18.96■□□□□ 0.63
LMNA-222ENST00000508500 SLC35G1Q2M3R5 365 aa18.96■□□□□ 0.63
LMNA-222ENST00000508500 STOX1Q6ZVD7 989 aa18.96■□□□□ 0.63
LMNA-222ENST00000508500 RGS22Q8NE09 1264 aa18.96■□□□□ 0.63
LMNA-222ENST00000508500 AP5M1Q9H0R1 490 aa18.96■□□□□ 0.63
LMNA-222ENST00000508500 PNMA2Q9UL42 364 aa18.96■□□□□ 0.63
LMNA-222ENST00000508500 SPTBN5Q9NRC6 3674 aaKnown RBP18.95■□□□□ 0.62
LMNA-222ENST00000508500 MYO9BQ13459 2157 aa18.95■□□□□ 0.62
LMNA-222ENST00000508500 PARP1P09874 1014 aaKnown RBP18.95■□□□□ 0.62
LMNA-222ENST00000508500 FPGSQ05932 587 aa18.95■□□□□ 0.62
LMNA-222ENST00000508500 IFIT1BQ5T764 474 aaKnown RBP18.95■□□□□ 0.62
LMNA-222ENST00000508500 C16orf59Q7L2K0 433 aa18.95■□□□□ 0.62
LMNA-222ENST00000508500 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.95■□□□□ 0.62
LMNA-222ENST00000508500 DNERQ8NFT8 737 aa18.95■□□□□ 0.62
LMNA-222ENST00000508500 FAM161BQ96MY7 647 aa18.95■□□□□ 0.62
LMNA-222ENST00000508500 CDX2Q99626 313 aaPredicted RBP18.95■□□□□ 0.62
LMNA-222ENST00000508500 UBAC1Q9BSL1 405 aa18.95■□□□□ 0.62
LMNA-222ENST00000508500 WDR11Q9BZH6 1224 aa18.95■□□□□ 0.62
LMNA-222ENST00000508500 SEMA6BQ9H3T3 888 aa18.95■□□□□ 0.62
LMNA-222ENST00000508500 VAT1LQ9HCJ6 419 aa18.95■□□□□ 0.62
LMNA-222ENST00000508500 MAD2L2Q9UI95 211 aa18.95■□□□□ 0.62
LMNA-222ENST00000508500 GTF3C3Q9Y5Q9 886 aa18.95■□□□□ 0.62
LMNA-222ENST00000508500 MROH7Q68CQ1 1323 aa18.95■□□□□ 0.62
LMNA-222ENST00000508500 PSMC6P62333 389 aa18.94■□□□□ 0.62
LMNA-222ENST00000508500 ITGA7Q13683 1181 aa18.94■□□□□ 0.62
LMNA-222ENST00000508500 ZNF697Q5TEC3 545 aa18.94■□□□□ 0.62
LMNA-222ENST00000508500 MFSD5Q6N075 450 aa18.94■□□□□ 0.62
LMNA-222ENST00000508500 COPS5Q92905 334 aa18.94■□□□□ 0.62
LMNA-222ENST00000508500 TAAR1Q96RJ0 339 aa18.94■□□□□ 0.62
LMNA-222ENST00000508500 ABCB11O95342 1321 aa18.94■□□□□ 0.62
LMNA-222ENST00000508500 E7EWF7 191 aa18.93■□□□□ 0.62
LMNA-222ENST00000508500 OPLAHO14841 1288 aa18.93■□□□□ 0.62
LMNA-222ENST00000508500 PPP1R11O60927 126 aaPredicted RBP18.93■□□□□ 0.62
LMNA-222ENST00000508500 ARIH2O95376 493 aa18.93■□□□□ 0.62
LMNA-222ENST00000508500 SYTL5Q8TDW5 730 aaPredicted RBP18.93■□□□□ 0.62
LMNA-222ENST00000508500 RUFY2Q8WXA3 655 aa18.93■□□□□ 0.62
LMNA-222ENST00000508500 MAP4K1Q92918 833 aa18.93■□□□□ 0.62
LMNA-222ENST00000508500 MTMR8Q96EF0 704 aa18.93■□□□□ 0.62
LMNA-222ENST00000508500 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.93■□□□□ 0.626e-8■□□□□ 10.7
LMNA-222ENST00000508500 PPP1R12CQ9BZL4 782 aa18.93■□□□□ 0.62
LMNA-222ENST00000508500 CHD9Q3L8U1 2897 aa18.92■□□□□ 0.62
LMNA-222ENST00000508500 PALM3A6NDB9 673 aaPredicted RBP18.92■□□□□ 0.62
LMNA-222ENST00000508500 KLRF2D3W0D1 207 aa18.92■□□□□ 0.62
LMNA-222ENST00000508500 CABYRO75952 493 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms