RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 BCCIPQ9P287 314 aaKnown RBP eCLIP14.31□□□□□ -0.12
SMG7-214ENST00000508461 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.31□□□□□ -0.12
SMG7-214ENST00000508461 H2AFXP16104 143 aaPredicted RBP14.3□□□□□ -0.12
SMG7-214ENST00000508461 LRRC27Q9C0I9 530 aa14.3□□□□□ -0.12
SMG7-214ENST00000508461 IL17RBQ9NRM6 502 aa14.3□□□□□ -0.12
SMG7-214ENST00000508461 ADAMTS3O15072 1205 aa14.3□□□□□ -0.12
SMG7-214ENST00000508461 ABL1P00519 1130 aa14.3□□□□□ -0.12
SMG7-214ENST00000508461 RASSF7Q02833 373 aa14.3□□□□□ -0.12
SMG7-214ENST00000508461 PRR16Q569H4 304 aa14.3□□□□□ -0.12
SMG7-214ENST00000508461 CCDC65Q8IXS2 484 aa14.3□□□□□ -0.12
SMG7-214ENST00000508461 CUL5Q93034 780 aa14.3□□□□□ -0.12
SMG7-214ENST00000508461 MEIS1O00470 390 aa14.3□□□□□ -0.12
SMG7-214ENST00000508461 POLR2FP61218 127 aaKnown RBP14.3□□□□□ -0.12
SMG7-214ENST00000508461 ODF2Q5BJF6 829 aa14.3□□□□□ -0.12
SMG7-214ENST00000508461 MAEAQ7L5Y9 396 aa14.3□□□□□ -0.12
SMG7-214ENST00000508461 GPBP1Q86WP2 473 aa14.3□□□□□ -0.12
SMG7-214ENST00000508461 ADSSL1Q8N142 457 aa14.3□□□□□ -0.12
SMG7-214ENST00000508461 DHTKD1Q96HY7 919 aaPredicted RBP14.3□□□□□ -0.12
SMG7-214ENST00000508461 MXD3Q9BW11 206 aa14.3□□□□□ -0.12
SMG7-214ENST00000508461 FHOD1Q9Y613 1164 aa14.3□□□□□ -0.12
SMG7-214ENST00000508461 FAM237AA0A1B0GTK4 181 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 MOCS3O95396 460 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 RASA1P20936 1047 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 ATP2B4P23634 1241 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 VSNL1P62760 191 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 ZSCAN26Q16670 478 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 GALNT17Q6IS24 598 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 MYOCDQ8IZQ8 938 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 SPICE1Q8N0Z3 855 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 LSM14BQ9BX40 385 aaKnown RBP14.29□□□□□ -0.12
SMG7-214ENST00000508461 DBNDD1Q9H9R9 158 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.29□□□□□ -0.123e-6■■■■■ 38.8
SMG7-214ENST00000508461 ATP1A1P05023 1023 aaKnown RBP14.29□□□□□ -0.12
SMG7-214ENST00000508461 PLA2G4AP47712 749 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 MAATS1Q7Z4T9 603 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 NOA1Q8NC60 698 aaKnown RBP14.29□□□□□ -0.12
SMG7-214ENST00000508461 LIMA1Q9UHB6 759 aaKnown RBP14.29□□□□□ -0.12
SMG7-214ENST00000508461 USP17L15C9J2P7 530 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 USP17L13C9JLJ4 530 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 USP17L11C9JVI0 530 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 USP17L18D6R9N7 530 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 USP17L22D6RA61 530 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 USP17L17D6RBQ6 530 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 USP17L19D6RCP7 530 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 USP17L20D6RJB6 530 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 EIF4A3P38919 411 aaKnown RBP14.29□□□□□ -0.12
SMG7-214ENST00000508461 USP17L24Q0WX57 530 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 TBX2Q13207 712 aaPredicted RBP14.29□□□□□ -0.12
SMG7-214ENST00000508461 CT47A1Q5JQC4 288 aaPredicted RBP14.29□□□□□ -0.12
SMG7-214ENST00000508461 FAM26FQ5R3K3 315 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 PDXDC2PQ6P474 469 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 USP17L6PQ6QN14 398 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 MED15Q96RN5 788 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 TRIM9Q9C026 710 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 MAD2L2Q9UI95 211 aa14.29□□□□□ -0.12
SMG7-214ENST00000508461 ZNF185O15231 689 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 SLC7A5Q01650 507 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 NT5DC1Q5TFE4 455 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 TTBK2Q6IQ55 1244 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 PANK4Q9NVE7 773 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 SERPINB13Q9UIV8 391 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 PCDHA1Q9Y5I3 950 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 STXBP3O00186 592 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 TBC1D22AQ8WUA7 517 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 THAP9Q9H5L6 903 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 PRDM4Q9UKN5 801 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.28□□□□□ -0.12
SMG7-214ENST00000508461 SAMM50Q9Y512 469 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 ATRNO75882 1429 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 GOLGA6L10A6NI86 522 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 H0YHG0 523 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 AKR1B1P15121 316 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 PABPC4Q13310 644 aaKnown RBP eCLIP14.28□□□□□ -0.12
SMG7-214ENST00000508461 CASP8Q14790 479 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 CDKAL1Q5VV42 579 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 CCDC84Q86UT8 332 aaPredicted RBP14.28□□□□□ -0.12
SMG7-214ENST00000508461 ERMNQ8TAM6 284 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 DDX12PQ92771 950 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 NDST4Q9H3R1 872 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 MLXIPQ9HAP2 919 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 ZBTB21Q9ULJ3 1066 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 TUBGCP6Q96RT7 1819 aa14.28□□□□□ -0.12
SMG7-214ENST00000508461 ZBED6P86452 979 aa14.27□□□□□ -0.12
SMG7-214ENST00000508461 IL17AQ16552 155 aa14.27□□□□□ -0.12
SMG7-214ENST00000508461 SLC9C1Q4G0N8 1177 aa14.27□□□□□ -0.12
SMG7-214ENST00000508461 CCDC93Q567U6 631 aa14.27□□□□□ -0.12
SMG7-214ENST00000508461 RCSD1Q6JBY9 416 aa14.27□□□□□ -0.12
SMG7-214ENST00000508461 C8orf74Q6P047 294 aa14.27□□□□□ -0.12
SMG7-214ENST00000508461 KLHL7Q8IXQ5 586 aa14.27□□□□□ -0.12
SMG7-214ENST00000508461 SYCP3Q8IZU3 236 aa14.27□□□□□ -0.12
SMG7-214ENST00000508461 ZNF384Q8TF68 577 aa14.27□□□□□ -0.12
SMG7-214ENST00000508461 AK8Q96MA6 479 aa14.27□□□□□ -0.12
SMG7-214ENST00000508461 TMOD2Q9NZR1 351 aa14.27□□□□□ -0.12
SMG7-214ENST00000508461 PPP1R1BQ9UD71 204 aaPredicted RBP14.27□□□□□ -0.12
SMG7-214ENST00000508461 PPP1R12BO60237 982 aaPredicted RBP14.27□□□□□ -0.12
SMG7-214ENST00000508461 GDF11O95390 407 aa14.27□□□□□ -0.12
SMG7-214ENST00000508461 HNRNPH2P55795 449 aaKnown RBP14.27□□□□□ -0.12
SMG7-214ENST00000508461 FUT2Q10981 343 aa14.27□□□□□ -0.12
SMG7-214ENST00000508461 TUBB2AQ13885 445 aa14.27□□□□□ -0.12
SMG7-214ENST00000508461 SBK1Q52WX2 424 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms