RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 SPATC1Q76KD6 591 aa7.71□□□□□ -1.18
GYPA-205ENST00000508337 DPH6Q7L8W6 267 aa7.71□□□□□ -1.18
GYPA-205ENST00000508337 ZNF605Q86T29 641 aa7.71□□□□□ -1.18
GYPA-205ENST00000508337 IRF2BP1Q8IU81 584 aa7.71□□□□□ -1.18
GYPA-205ENST00000508337 COPS5Q92905 334 aa7.71□□□□□ -1.18
GYPA-205ENST00000508337 NUDT19A8MXV4 375 aa7.7□□□□□ -1.18
GYPA-205ENST00000508337 RPL11P62913 178 aaKnown RBP7.7□□□□□ -1.18
GYPA-205ENST00000508337 PKN1Q16512 942 aa7.7□□□□□ -1.18
GYPA-205ENST00000508337 PRSS53Q2L4Q9 553 aa7.7□□□□□ -1.18
GYPA-205ENST00000508337 NSMFQ6X4W1 530 aa7.7□□□□□ -1.18
GYPA-205ENST00000508337 LZTR1Q8N653 840 aa7.7□□□□□ -1.18
GYPA-205ENST00000508337 TMEM145Q8NBT3 493 aa7.7□□□□□ -1.18
GYPA-205ENST00000508337 PDLIM7Q9NR12 457 aa7.7□□□□□ -1.18
GYPA-205ENST00000508337 GULP1Q9UBP9 304 aa7.7□□□□□ -1.18
GYPA-205ENST00000508337 RWDD3Q9Y3V2 267 aa7.7□□□□□ -1.18
GYPA-205ENST00000508337 MAP4K2Q12851 820 aa7.69□□□□□ -1.18
GYPA-205ENST00000508337 RAB3GAP1Q15042 981 aa7.69□□□□□ -1.18
GYPA-205ENST00000508337 TMEM52Q8NDY8 209 aa7.69□□□□□ -1.18
GYPA-205ENST00000508337 MMP19Q99542 508 aa7.69□□□□□ -1.18
GYPA-205ENST00000508337 LNPKQ9C0E8 428 aa7.69□□□□□ -1.18
GYPA-205ENST00000508337 MARCH2Q9P0N8 246 aa7.69□□□□□ -1.18
GYPA-205ENST00000508337 ACSL6Q9UKU0 697 aa7.69□□□□□ -1.18
GYPA-205ENST00000508337 CDK11AQ9UQ88 783 aaPredicted RBP7.69□□□□□ -1.18
GYPA-205ENST00000508337 CARMIL2Q6F5E8 1435 aa7.69□□□□□ -1.18
GYPA-205ENST00000508337 ZNF503-AS2A6NEH8 195 aa7.68□□□□□ -1.18
GYPA-205ENST00000508337 ABLIM1O14639 778 aa7.68□□□□□ -1.18
GYPA-205ENST00000508337 FARP2O94887 1054 aaPredicted RBP7.68□□□□□ -1.18
GYPA-205ENST00000508337 FGFR1P11362 822 aa7.68□□□□□ -1.18
GYPA-205ENST00000508337 PABPC1P11940 636 aaKnown RBP7.68□□□□□ -1.18
GYPA-205ENST00000508337 LTBRP36941 435 aa7.68□□□□□ -1.18
GYPA-205ENST00000508337 GTF2A2P52657 109 aa7.68□□□□□ -1.18
GYPA-205ENST00000508337 CCDC144BQ3MJ40 725 aa7.68□□□□□ -1.18
GYPA-205ENST00000508337 ACBD5Q5T8D3 534 aaPredicted RBP7.68□□□□□ -1.18
GYPA-205ENST00000508337 PRR23BQ6ZRT6 265 aa7.68□□□□□ -1.18
GYPA-205ENST00000508337 FBXO15Q8NCQ5 510 aaPredicted RBP7.68□□□□□ -1.18
GYPA-205ENST00000508337 FRS2Q8WU20 508 aa7.68□□□□□ -1.18
GYPA-205ENST00000508337 DNAJC7Q99615 494 aa7.68□□□□□ -1.18
GYPA-205ENST00000508337 SP110Q9HB58 689 aa7.68□□□□□ -1.18
GYPA-205ENST00000508337 ARHGEF4Q9NR80 690 aa7.68□□□□□ -1.18
GYPA-205ENST00000508337 NUDT5Q9UKK9 219 aa7.68□□□□□ -1.18
GYPA-205ENST00000508337 COA3Q9Y2R0 106 aaPredicted RBP7.68□□□□□ -1.18
GYPA-205ENST00000508337 FAM221BA6H8Z2 402 aa7.67□□□□□ -1.18
GYPA-205ENST00000508337 DIAPH1O60610 1272 aaKnown RBP7.67□□□□□ -1.18
GYPA-205ENST00000508337 SCG5P05408 212 aa7.67□□□□□ -1.18
GYPA-205ENST00000508337 GRIA2P42262 883 aa7.67□□□□□ -1.18
GYPA-205ENST00000508337 TXKP42681 527 aa7.67□□□□□ -1.18
GYPA-205ENST00000508337 KIR3DS1Q14943 382 aa7.67□□□□□ -1.18
GYPA-205ENST00000508337 SF1Q15637 639 aaKnown RBP7.67□□□□□ -1.18
GYPA-205ENST00000508337 NPLOC4Q8TAT6 608 aa7.67□□□□□ -1.18
GYPA-205ENST00000508337 TIMM13Q9Y5L4 95 aaPredicted RBP7.67□□□□□ -1.18
GYPA-205ENST00000508337 C7orf72A4D263 438 aa7.66□□□□□ -1.18
GYPA-205ENST00000508337 FUCA1P04066 466 aa7.66□□□□□ -1.18
GYPA-205ENST00000508337 SDHBP21912 280 aa7.66□□□□□ -1.18
GYPA-205ENST00000508337 SUMO1P63165 101 aaKnown RBP7.66□□□□□ -1.18
GYPA-205ENST00000508337 MVKQ03426 396 aa7.66□□□□□ -1.18
GYPA-205ENST00000508337 NR1I3Q14994 352 aa7.66□□□□□ -1.18
GYPA-205ENST00000508337 ZSWIM2Q8NEG5 633 aa7.66□□□□□ -1.18
GYPA-205ENST00000508337 SLC26A8Q96RN1 970 aa7.66□□□□□ -1.18
GYPA-205ENST00000508337 PPP1R16BQ96T49 567 aa7.66□□□□□ -1.18
GYPA-205ENST00000508337 SIRT5Q9NXA8 310 aa7.66□□□□□ -1.18
GYPA-205ENST00000508337 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.66□□□□□ -1.18
GYPA-205ENST00000508337 TRBV23-1A0A0A0MS06 115 aa7.65□□□□□ -1.18
GYPA-205ENST00000508337 NOTOA8MTQ0 251 aa7.65□□□□□ -1.18
GYPA-205ENST00000508337 ZBTB38Q8NAP3 1195 aaPredicted RBP7.65□□□□□ -1.18
GYPA-205ENST00000508337 TRMT2BQ96GJ1 504 aaKnown RBP7.65□□□□□ -1.18
GYPA-205ENST00000508337 TMEM169Q96HH4 297 aa7.65□□□□□ -1.18
GYPA-205ENST00000508337 PHF20Q9BVI0 1012 aa7.65□□□□□ -1.18
GYPA-205ENST00000508337 TNFRSF12AQ9NP84 129 aa7.65□□□□□ -1.18
GYPA-205ENST00000508337 PCDHA2Q9Y5H9 948 aa7.65□□□□□ -1.18
GYPA-205ENST00000508337 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.64□□□□□ -1.19
GYPA-205ENST00000508337 DLX3O60479 287 aa7.64□□□□□ -1.19
GYPA-205ENST00000508337 CYBBP04839 570 aa7.64□□□□□ -1.19
GYPA-205ENST00000508337 MSL3P1P0C860 447 aa7.64□□□□□ -1.19
GYPA-205ENST00000508337 ERVFRD-1P60508 538 aa7.64□□□□□ -1.19
GYPA-205ENST00000508337 ZC3H12BQ5HYM0 836 aaKnown RBP7.64□□□□□ -1.19
GYPA-205ENST00000508337 YOD1Q5VVQ6 348 aaPredicted RBP7.64□□□□□ -1.19
GYPA-205ENST00000508337 ZC3H14Q6PJT7 736 aaKnown RBP7.64□□□□□ -1.19
GYPA-205ENST00000508337 TMC6Q7Z403 805 aa7.64□□□□□ -1.19
GYPA-205ENST00000508337 TEX2Q8IWB9 1127 aa7.64□□□□□ -1.19
GYPA-205ENST00000508337 SCUBE1Q8IWY4 988 aa7.64□□□□□ -1.19
GYPA-205ENST00000508337 THAP3Q8WTV1 239 aaPredicted RBP7.64□□□□□ -1.19
GYPA-205ENST00000508337 DCAF4Q8WV16 495 aa7.64□□□□□ -1.19
GYPA-205ENST00000508337 SHISA4Q96DD7 197 aa7.64□□□□□ -1.19
GYPA-205ENST00000508337 FAM84AQ96KN4 292 aa7.64□□□□□ -1.19
GYPA-205ENST00000508337 ALG1Q9BT22 464 aa7.64□□□□□ -1.19
GYPA-205ENST00000508337 AP5M1Q9H0R1 490 aa7.64□□□□□ -1.19
GYPA-205ENST00000508337 CLDND1Q9NY35 253 aa7.64□□□□□ -1.19
GYPA-205ENST00000508337 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.64□□□□□ -1.19
GYPA-205ENST00000508337 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.64□□□□□ -1.191e-6■■■■■ 31.9
GYPA-205ENST00000508337 F8W031 263 aaPredicted RBP7.63□□□□□ -1.19
GYPA-205ENST00000508337 NFIBO00712 420 aa7.63□□□□□ -1.19
GYPA-205ENST00000508337 TMEM253P0C7T8 217 aa7.63□□□□□ -1.19
GYPA-205ENST00000508337 SRSF3P84103 164 aaKnown RBP7.63□□□□□ -1.19
GYPA-205ENST00000508337 INF2Q27J81 1249 aa7.63□□□□□ -1.19
GYPA-205ENST00000508337 SLC35F1Q5T1Q4 408 aa7.63□□□□□ -1.19
GYPA-205ENST00000508337 WWC2Q6AWC2 1192 aa7.63□□□□□ -1.19
GYPA-205ENST00000508337 OGFOD2Q6N063 350 aa7.63□□□□□ -1.19
GYPA-205ENST00000508337 PAQR3Q6TCH7 311 aa7.63□□□□□ -1.19
GYPA-205ENST00000508337 SYDE1Q6ZW31 735 aaPredicted RBP7.63□□□□□ -1.19
GYPA-205ENST00000508337 MTDHQ86UE4 582 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms