RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 IFIT1BQ5T764 474 aaKnown RBP16.7■□□□□ 0.26
RAB28-205ENST00000508274 STAG2Q8N3U4 1231 aa16.7■□□□□ 0.26
RAB28-205ENST00000508274 PCSK9Q8NBP7 692 aaKnown RBP16.7■□□□□ 0.26
RAB28-205ENST00000508274 GLT1D1Q96MS3 346 aa16.7■□□□□ 0.26
RAB28-205ENST00000508274 ADD3Q9UEY8 706 aaKnown RBP16.7■□□□□ 0.26
RAB28-205ENST00000508274 PARP1P09874 1014 aaKnown RBP16.69■□□□□ 0.26
RAB28-205ENST00000508274 NKX3-2P78367 333 aa16.69■□□□□ 0.26
RAB28-205ENST00000508274 FAAP100Q0VG06 881 aa16.69■□□□□ 0.26
RAB28-205ENST00000508274 C9orf50Q5SZB4 431 aa16.69■□□□□ 0.26
RAB28-205ENST00000508274 STOX1Q6ZVD7 989 aa16.69■□□□□ 0.26
RAB28-205ENST00000508274 ANKRD33Q7Z3H0 272 aa16.69■□□□□ 0.26
RAB28-205ENST00000508274 VTA1Q9NP79 307 aa16.69■□□□□ 0.26
RAB28-205ENST00000508274 DYNC1LI2O43237 492 aaPredicted RBP16.68■□□□□ 0.26
RAB28-205ENST00000508274 QRICH1Q2TAL8 776 aa16.68■□□□□ 0.26
RAB28-205ENST00000508274 KIAA1211Q6ZU35 1233 aa16.68■□□□□ 0.26
RAB28-205ENST00000508274 Q7L0L9 218 aa16.68■□□□□ 0.26
RAB28-205ENST00000508274 TBC1D5Q92609 795 aa16.68■□□□□ 0.26
RAB28-205ENST00000508274 VTI1AQ96AJ9 217 aa16.68■□□□□ 0.26
RAB28-205ENST00000508274 SENP2Q9HC62 589 aa16.68■□□□□ 0.26
RAB28-205ENST00000508274 VAT1LQ9HCJ6 419 aa16.68■□□□□ 0.26
RAB28-205ENST00000508274 PNMA2Q9UL42 364 aa16.68■□□□□ 0.26
RAB28-205ENST00000508274 BAZ2BQ9UIF8 2168 aaKnown RBP16.68■□□□□ 0.26
RAB28-205ENST00000508274 ELP1O95163 1332 aa16.68■□□□□ 0.26
RAB28-205ENST00000508274 DHX16O60231 1041 aaKnown RBP16.68■□□□□ 0.26
RAB28-205ENST00000508274 TRDNQ13061 729 aa16.68■□□□□ 0.26
RAB28-205ENST00000508274 SHHQ15465 462 aa16.68■□□□□ 0.26
RAB28-205ENST00000508274 FSCN1Q16658 493 aaKnown RBP16.68■□□□□ 0.26
RAB28-205ENST00000508274 IQSEC1Q6DN90 963 aa16.68■□□□□ 0.26
RAB28-205ENST00000508274 CXCL17Q6UXB2 119 aa16.68■□□□□ 0.26
RAB28-205ENST00000508274 CHST3Q7LGC8 479 aa16.68■□□□□ 0.26
RAB28-205ENST00000508274 JMJD4Q9H9V9 463 aa16.68■□□□□ 0.26
RAB28-205ENST00000508274 TMEM39AQ9NV64 488 aa16.68■□□□□ 0.26
RAB28-205ENST00000508274 CDH23Q9H251 3354 aa16.67■□□□□ 0.26
RAB28-205ENST00000508274 A0A0U1RQG5 324 aaPredicted RBP16.67■□□□□ 0.26
RAB28-205ENST00000508274 E7EWF7 191 aa16.67■□□□□ 0.26
RAB28-205ENST00000508274 KIAA0355O15063 1070 aa16.67■□□□□ 0.26
RAB28-205ENST00000508274 CDK7P50613 346 aa16.67■□□□□ 0.26
RAB28-205ENST00000508274 TOX2Q96NM4 488 aa16.67■□□□□ 0.26
RAB28-205ENST00000508274 AP5M1Q9H0R1 490 aa16.67■□□□□ 0.26
RAB28-205ENST00000508274 ABCB11O95342 1321 aa16.66■□□□□ 0.26
RAB28-205ENST00000508274 EYSQ5T1H1 3165 aa16.66■□□□□ 0.26
RAB28-205ENST00000508274 DCDC2CA8MYV0 355 aa16.66■□□□□ 0.26
RAB28-205ENST00000508274 ARVCFO00192 962 aa16.66■□□□□ 0.26
RAB28-205ENST00000508274 RAG1P15918 1043 aa16.66■□□□□ 0.26
RAB28-205ENST00000508274 EDNRBP24530 442 aa16.66■□□□□ 0.26
RAB28-205ENST00000508274 EPHB4P54760 987 aa16.66■□□□□ 0.26
RAB28-205ENST00000508274 MAP4K1Q92918 833 aa16.66■□□□□ 0.26
RAB28-205ENST00000508274 WDR11Q9BZH6 1224 aa16.66■□□□□ 0.26
RAB28-205ENST00000508274 COL20A1Q9P218 1284 aa16.66■□□□□ 0.26
RAB28-205ENST00000508274 MAD2L2Q9UI95 211 aa16.66■□□□□ 0.26
RAB28-205ENST00000508274 RBM8AQ9Y5S9 174 aaKnown RBP16.66■□□□□ 0.26
RAB28-205ENST00000508274 LOC102724159A0A0B4J2E5 919 aa16.65■□□□□ 0.26
RAB28-205ENST00000508274 KLRF2D3W0D1 207 aa16.65■□□□□ 0.26
RAB28-205ENST00000508274 IFIT3O14879 490 aaKnown RBP16.65■□□□□ 0.26
RAB28-205ENST00000508274 PDE4DQ08499 809 aa16.65■□□□□ 0.26
RAB28-205ENST00000508274 PWP2Q15269 919 aaKnown RBP16.65■□□□□ 0.26
RAB28-205ENST00000508274 SLC35G1Q2M3R5 365 aa16.65■□□□□ 0.26
RAB28-205ENST00000508274 DUSP28Q4G0W2 176 aa16.65■□□□□ 0.26
RAB28-205ENST00000508274 GPR153Q6NV75 609 aa16.65■□□□□ 0.26
RAB28-205ENST00000508274 FBXO11Q86XK2 927 aa16.65■□□□□ 0.26
RAB28-205ENST00000508274 FAM126BQ8IXS8 530 aa16.65■□□□□ 0.26
RAB28-205ENST00000508274 DEFB123Q8N688 67 aa16.65■□□□□ 0.26
RAB28-205ENST00000508274 DNERQ8NFT8 737 aa16.65■□□□□ 0.26
RAB28-205ENST00000508274 NCOA7Q8NI08 942 aa16.65■□□□□ 0.26
RAB28-205ENST00000508274 TBX21Q9UL17 535 aa16.65■□□□□ 0.26
RAB28-205ENST00000508274 KIAA1217Q5T5P2 1943 aa16.65■□□□□ 0.26
RAB28-205ENST00000508274 MROH7Q68CQ1 1323 aa16.65■□□□□ 0.26
RAB28-205ENST00000508274 PPP1R11O60927 126 aaPredicted RBP16.64■□□□□ 0.25
RAB28-205ENST00000508274 ANTXR2P58335 489 aa16.64■□□□□ 0.25
RAB28-205ENST00000508274 PSMC6P62333 389 aa16.64■□□□□ 0.25
RAB28-205ENST00000508274 RALYLQ86SE5 291 aaKnown RBP16.64■□□□□ 0.25
RAB28-205ENST00000508274 RGS22Q8NE09 1264 aa16.64■□□□□ 0.25
RAB28-205ENST00000508274 SYTL5Q8TDW5 730 aaPredicted RBP16.64■□□□□ 0.25
RAB28-205ENST00000508274 TAAR1Q96RJ0 339 aa16.64■□□□□ 0.25
RAB28-205ENST00000508274 Q9Y3F1 56 aa16.64■□□□□ 0.25
RAB28-205ENST00000508274 GRIN2DO15399 1336 aa16.64■□□□□ 0.25
RAB28-205ENST00000508274 RBM47A0AV96 593 aaKnown RBP16.64■□□□□ 0.25
RAB28-205ENST00000508274 PALM3A6NDB9 673 aaPredicted RBP16.64■□□□□ 0.25
RAB28-205ENST00000508274 OPLAHO14841 1288 aa16.64■□□□□ 0.25
RAB28-205ENST00000508274 COL9A3Q14050 684 aaPredicted RBP16.64■□□□□ 0.25
RAB28-205ENST00000508274 WTAPQ15007 396 aa16.64■□□□□ 0.25
RAB28-205ENST00000508274 MB21D2Q8IYB1 491 aaPredicted RBP16.64■□□□□ 0.25
RAB28-205ENST00000508274 COPS5Q92905 334 aa16.64■□□□□ 0.25
RAB28-205ENST00000508274 LSG1Q9H089 658 aaKnown RBP16.64■□□□□ 0.25
RAB28-205ENST00000508274 ARIH2O95376 493 aa16.63■□□□□ 0.25
RAB28-205ENST00000508274 ITGA7Q13683 1181 aa16.63■□□□□ 0.25
RAB28-205ENST00000508274 GRM4Q14833 912 aa16.63■□□□□ 0.25
RAB28-205ENST00000508274 OR6J1Q8NGC5 347 aa16.63■□□□□ 0.25
RAB28-205ENST00000508274 MTMR8Q96EF0 704 aa16.63■□□□□ 0.25
RAB28-205ENST00000508274 ESYT1Q9BSJ8 1104 aa16.63■□□□□ 0.25
RAB28-205ENST00000508274 GPHNQ9NQX3 736 aaPredicted RBP16.63■□□□□ 0.25
RAB28-205ENST00000508274 ERICH2A1L162 156 aa16.62■□□□□ 0.25
RAB28-205ENST00000508274 ZEB2O60315 1214 aa16.62■□□□□ 0.25
RAB28-205ENST00000508274 CABYRO75952 493 aa16.62■□□□□ 0.25
RAB28-205ENST00000508274 TIMP1P01033 207 aa16.62■□□□□ 0.25
RAB28-205ENST00000508274 CD4P01730 458 aa16.62■□□□□ 0.25
RAB28-205ENST00000508274 FPGSQ05932 587 aa16.62■□□□□ 0.25
RAB28-205ENST00000508274 PPP2R5BQ15173 497 aa16.62■□□□□ 0.25
RAB28-205ENST00000508274 TMEM67Q5HYA8 995 aa16.62■□□□□ 0.25
RAB28-205ENST00000508274 HOMER1Q86YM7 354 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms