RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 CNTN2Q02246 1040 aa17.33■□□□□ 0.36
RNF4-210ENST00000508235 TRIM32Q13049 653 aa17.33■□□□□ 0.36
RNF4-210ENST00000508235 CPLX2Q6PUV4 134 aaKnown RBP17.33■□□□□ 0.36
RNF4-210ENST00000508235 ZNF713Q8N859 430 aaPredicted RBP17.33■□□□□ 0.36
RNF4-210ENST00000508235 DNERQ8NFT8 737 aa17.33■□□□□ 0.36
RNF4-210ENST00000508235 FAM217BQ9NTX9 383 aaPredicted RBP17.33■□□□□ 0.36
RNF4-210ENST00000508235 LCTP09848 1927 aa17.33■□□□□ 0.36
RNF4-210ENST00000508235 CYBAP13498 195 aa17.32■□□□□ 0.36
RNF4-210ENST00000508235 GJA8P48165 433 aa17.32■□□□□ 0.36
RNF4-210ENST00000508235 AK2P54819 239 aa17.32■□□□□ 0.36
RNF4-210ENST00000508235 SLC30A10Q6XR72 485 aa17.32■□□□□ 0.36
RNF4-210ENST00000508235 FGD4Q96M96 766 aa17.32■□□□□ 0.36
RNF4-210ENST00000508235 MCM3APO60318 1980 aa17.31■□□□□ 0.36
RNF4-210ENST00000508235 SOWAHBA6NEL2 793 aa17.31■□□□□ 0.36
RNF4-210ENST00000508235 CPLX1O14810 134 aa17.31■□□□□ 0.36
RNF4-210ENST00000508235 CAPN15O75808 1086 aa17.31■□□□□ 0.36
RNF4-210ENST00000508235 CFBP00751 764 aa17.31■□□□□ 0.36
RNF4-210ENST00000508235 CNGA1P29973 690 aa17.31■□□□□ 0.36
RNF4-210ENST00000508235 ADD1P35611 737 aaKnown RBP17.31■□□□□ 0.36
RNF4-210ENST00000508235 HSD17B4P51659 736 aa17.31■□□□□ 0.36
RNF4-210ENST00000508235 SOX10P56693 466 aa17.31■□□□□ 0.36
RNF4-210ENST00000508235 AKAP17AQ02040 695 aaKnown RBP17.31■□□□□ 0.36
RNF4-210ENST00000508235 GHRHRQ02643 423 aa17.31■□□□□ 0.36
RNF4-210ENST00000508235 FUT2Q10981 343 aa17.31■□□□□ 0.36
RNF4-210ENST00000508235 IFFO2Q5TF58 517 aa17.31■□□□□ 0.36
RNF4-210ENST00000508235 ARMCX2Q7L311 632 aa17.31■□□□□ 0.36
RNF4-210ENST00000508235 SLKQ9H2G2 1235 aaPredicted RBP17.31■□□□□ 0.36
RNF4-210ENST00000508235 ABHD16BQ9H3Z7 469 aa17.31■□□□□ 0.36
RNF4-210ENST00000508235 V9GY48 417 aaPredicted RBP17.31■□□□□ 0.36
RNF4-210ENST00000508235 GCOM1H8Y6P7 765 aaPredicted RBP17.3■□□□□ 0.36
RNF4-210ENST00000508235 SEPT4O43236 478 aa17.3■□□□□ 0.36
RNF4-210ENST00000508235 SGPL1O95470 568 aa17.3■□□□□ 0.36
RNF4-210ENST00000508235 POLR2MP0CAP2 368 aa17.3■□□□□ 0.36
RNF4-210ENST00000508235 CCND3P30281 292 aaPredicted RBP17.3■□□□□ 0.36
RNF4-210ENST00000508235 ALDH5A1P51649 535 aaPredicted RBP17.3■□□□□ 0.36
RNF4-210ENST00000508235 CCT2P78371 535 aaKnown RBP17.3■□□□□ 0.36
RNF4-210ENST00000508235 TEX2Q8IWB9 1127 aa17.3■□□□□ 0.36
RNF4-210ENST00000508235 TRIM22Q8IYM9 498 aa17.3■□□□□ 0.36
RNF4-210ENST00000508235 NSUN6Q8TEA1 469 aaKnown RBP17.3■□□□□ 0.36
RNF4-210ENST00000508235 U2AF1L4Q8WU68 220 aaKnown RBP17.3■□□□□ 0.36
RNF4-210ENST00000508235 CUL5Q93034 780 aa17.3■□□□□ 0.36
RNF4-210ENST00000508235 DEFB118Q96PH6 123 aa17.3■□□□□ 0.36
RNF4-210ENST00000508235 RNF26Q9BY78 433 aaPredicted RBP17.3■□□□□ 0.36
RNF4-210ENST00000508235 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.3■□□□□ 0.36
RNF4-210ENST00000508235 POTEFA5A3E0 1075 aa17.29■□□□□ 0.36
RNF4-210ENST00000508235 OPLAHO14841 1288 aa17.29■□□□□ 0.36
RNF4-210ENST00000508235 PRPF3O43395 683 aaKnown RBP17.29■□□□□ 0.36
RNF4-210ENST00000508235 CDKL5O76039 1030 aa17.29■□□□□ 0.36
RNF4-210ENST00000508235 SNAI1O95863 264 aaPredicted RBP17.29■□□□□ 0.36
RNF4-210ENST00000508235 IFNAR1P17181 557 aa17.29■□□□□ 0.36
RNF4-210ENST00000508235 PPP1R18Q6NYC8 613 aa17.29■□□□□ 0.36
RNF4-210ENST00000508235 HEATR3Q7Z4Q2 680 aa17.29■□□□□ 0.36
RNF4-210ENST00000508235 SYTL5Q8TDW5 730 aaPredicted RBP17.29■□□□□ 0.36
RNF4-210ENST00000508235 MORC4Q8TE76 937 aa17.29■□□□□ 0.36
RNF4-210ENST00000508235 LARP6Q9BRS8 491 aaKnown RBP17.29■□□□□ 0.36
RNF4-210ENST00000508235 BACH2Q9BYV9 841 aa17.29■□□□□ 0.36
RNF4-210ENST00000508235 DDX20Q9UHI6 824 aaKnown RBP17.29■□□□□ 0.36
RNF4-210ENST00000508235 TPCN1Q9ULQ1 816 aa17.29■□□□□ 0.36
RNF4-210ENST00000508235 FRMPD3Q5JV73 1810 aa17.28■□□□□ 0.36
RNF4-210ENST00000508235 TFRCP02786 760 aaKnown RBP17.28■□□□□ 0.36
RNF4-210ENST00000508235 AKR1A1P14550 325 aa17.28■□□□□ 0.36
RNF4-210ENST00000508235 STK3Q13188 491 aa17.28■□□□□ 0.36
RNF4-210ENST00000508235 ACVR2BQ13705 512 aa17.28■□□□□ 0.36
RNF4-210ENST00000508235 RABEP1Q15276 862 aa17.28■□□□□ 0.36
RNF4-210ENST00000508235 PFKFB3Q16875 520 aaPredicted RBP17.28■□□□□ 0.36
RNF4-210ENST00000508235 PRAMEF19Q5SWL8 479 aa17.28■□□□□ 0.36
RNF4-210ENST00000508235 TRPV1Q8NER1 839 aa17.28■□□□□ 0.36
RNF4-210ENST00000508235 TBC1D5Q92609 795 aa17.28■□□□□ 0.36
RNF4-210ENST00000508235 IWS1Q96ST2 819 aa17.28■□□□□ 0.36
RNF4-210ENST00000508235 CRISPLD2Q9H0B8 497 aa17.28■□□□□ 0.36
RNF4-210ENST00000508235 GLT8D2Q9H1C3 349 aa17.28■□□□□ 0.36
RNF4-210ENST00000508235 PSTPIP2Q9H939 334 aa17.28■□□□□ 0.36
RNF4-210ENST00000508235 NCOA5Q9HCD5 579 aaKnown RBP17.28■□□□□ 0.36
RNF4-210ENST00000508235 ZHX1Q9UKY1 873 aaPredicted RBP17.28■□□□□ 0.36
RNF4-210ENST00000508235 ASTN1O14525 1302 aa17.27■□□□□ 0.36
RNF4-210ENST00000508235 HTTP42858 3142 aa17.27■□□□□ 0.36
RNF4-210ENST00000508235 hCG_1642624A0A1W2PR95 340 aa17.27■□□□□ 0.36
RNF4-210ENST00000508235 PIK3CDO00329 1044 aa17.27■□□□□ 0.36
RNF4-210ENST00000508235 PFKFB2O60825 505 aa17.27■□□□□ 0.36
RNF4-210ENST00000508235 ZNF865P0CJ78 1059 aaPredicted RBP17.27■□□□□ 0.36
RNF4-210ENST00000508235 SCG2P13521 617 aa17.27■□□□□ 0.36
RNF4-210ENST00000508235 NAPAP54920 295 aa17.27■□□□□ 0.36
RNF4-210ENST00000508235 PDE4DQ08499 809 aa17.27■□□□□ 0.36
RNF4-210ENST00000508235 SSRP1Q08945 709 aaKnown RBP17.27■□□□□ 0.36
RNF4-210ENST00000508235 NTRK3Q16288 839 aa17.27■□□□□ 0.36
RNF4-210ENST00000508235 ARHGEF16Q5VV41 709 aa17.27■□□□□ 0.36
RNF4-210ENST00000508235 SMARCC2Q8TAQ2 1214 aa17.27■□□□□ 0.36
RNF4-210ENST00000508235 CCDC12Q8WUD4 166 aaPredicted RBP17.27■□□□□ 0.36
RNF4-210ENST00000508235 TBC1D32Q96NH3 1257 aa17.27■□□□□ 0.36
RNF4-210ENST00000508235 PURBQ96QR8 312 aaKnown RBP17.27■□□□□ 0.36
RNF4-210ENST00000508235 RMDN3Q96TC7 470 aa17.27■□□□□ 0.36
RNF4-210ENST00000508235 KIF2CQ99661 725 aa17.27■□□□□ 0.36
RNF4-210ENST00000508235 VTA1Q9NP79 307 aa17.27■□□□□ 0.36
RNF4-210ENST00000508235 BARHL2Q9NY43 387 aa17.27■□□□□ 0.36
RNF4-210ENST00000508235 FAM184BQ9ULE4 1060 aa17.27■□□□□ 0.36
RNF4-210ENST00000508235 KIAA0100Q14667 2235 aaKnown RBP17.27■□□□□ 0.35
RNF4-210ENST00000508235 ST18O60284 1047 aa17.26■□□□□ 0.35
RNF4-210ENST00000508235 RARBP10826 455 aa17.26■□□□□ 0.35
RNF4-210ENST00000508235 EN2P19622 333 aaPredicted RBP17.26■□□□□ 0.35
RNF4-210ENST00000508235 EDNRBP24530 442 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms