RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 MTMR9Q96QG7 549 aa12.23□□□□□ -0.45
LIN54-207ENST00000508171 PNKPQ96T60 521 aa12.23□□□□□ -0.45
LIN54-207ENST00000508171 MXD3Q9BW11 206 aa12.23□□□□□ -0.45
LIN54-207ENST00000508171 FUT8Q9BYC5 575 aa12.23□□□□□ -0.45
LIN54-207ENST00000508171 THSD7AQ9UPZ6 1657 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 UBAP1LF5GYI3 381 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 ENC1O14682 589 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 BBOX1O75936 387 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 TRIM21P19474 475 aaKnown RBP12.22□□□□□ -0.45
LIN54-207ENST00000508171 SMARCA1P28370 1054 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 HERVK_113P62684 666 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 GRB10Q13322 594 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 DYMQ7RTS9 669 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 CEP112Q8N8E3 955 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 CNOT6LQ96LI5 555 aaKnown RBP12.22□□□□□ -0.45
LIN54-207ENST00000508171 NUDT12Q9BQG2 462 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 SEMA6BQ9H3T3 888 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 DDX4Q9NQI0 724 aaKnown RBP12.22□□□□□ -0.45
LIN54-207ENST00000508171 BLOC1S4Q9NUP1 217 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 POTEMA6NI47 508 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 DDR1Q08345 913 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 MCM6Q14566 821 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 MIIPQ5JXC2 388 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 NCAPH2Q6IBW4 605 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 DPP8Q6V1X1 898 aaPredicted RBP12.22□□□□□ -0.45
LIN54-207ENST00000508171 GJA10Q969M2 543 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 CALML4Q96GE6 196 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 TTYH3Q9C0H2 523 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 MAGEF1Q9HAY2 307 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 PODXL2Q9NZ53 605 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 HDAC6Q9UBN7 1215 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 LRWD1Q9UFC0 647 aa12.22□□□□□ -0.45
LIN54-207ENST00000508171 MYMKA6NI61 221 aa12.21□□□□□ -0.45
LIN54-207ENST00000508171 RHOXF2BP0C7M4 288 aa12.21□□□□□ -0.45
LIN54-207ENST00000508171 MTIF2P46199 727 aaKnown RBP12.21□□□□□ -0.45
LIN54-207ENST00000508171 CALCRLQ16602 461 aa12.21□□□□□ -0.45
LIN54-207ENST00000508171 LONRF2Q1L5Z9 754 aa12.21□□□□□ -0.45
LIN54-207ENST00000508171 TTBK2Q6IQ55 1244 aa12.21□□□□□ -0.45
LIN54-207ENST00000508171 SLF2Q8IX21 1173 aa12.21□□□□□ -0.45
LIN54-207ENST00000508171 TBC1D22AQ8WUA7 517 aa12.21□□□□□ -0.45
LIN54-207ENST00000508171 GJD4Q96KN9 370 aaPredicted RBP12.21□□□□□ -0.45
LIN54-207ENST00000508171 PNMA5Q96PV4 448 aa12.21□□□□□ -0.45
LIN54-207ENST00000508171 RHOXF2Q9BQY4 288 aa12.21□□□□□ -0.45
LIN54-207ENST00000508171 NOC4LQ9BVI4 516 aaKnown RBP12.21□□□□□ -0.45
LIN54-207ENST00000508171 UBR3Q6ZT12 1888 aa12.21□□□□□ -0.45
LIN54-207ENST00000508171 FOCADQ5VW36 1801 aa12.21□□□□□ -0.46
LIN54-207ENST00000508171 BICDL2A1A5D9 508 aa12.21□□□□□ -0.46
LIN54-207ENST00000508171 RCCD1A6NED2 376 aa12.21□□□□□ -0.46
LIN54-207ENST00000508171 ATP8B1O43520 1251 aa12.21□□□□□ -0.46
LIN54-207ENST00000508171 ERCC3P19447 782 aa12.21□□□□□ -0.46
LIN54-207ENST00000508171 AMPD3Q01432 767 aa12.21□□□□□ -0.46
LIN54-207ENST00000508171 AMPD2Q01433 879 aa12.21□□□□□ -0.46
LIN54-207ENST00000508171 GABPAQ06546 454 aa12.21□□□□□ -0.46
LIN54-207ENST00000508171 TSR1Q2NL82 804 aaKnown RBP12.21□□□□□ -0.46
LIN54-207ENST00000508171 SV2BQ7L1I2 683 aa12.21□□□□□ -0.46
LIN54-207ENST00000508171 CERS5Q8N5B7 392 aa12.21□□□□□ -0.46
LIN54-207ENST00000508171 CCDC47Q96A33 483 aaKnown RBP12.21□□□□□ -0.46
LIN54-207ENST00000508171 UIMC1Q96RL1 719 aa12.21□□□□□ -0.46
LIN54-207ENST00000508171 UBXN6Q9BZV1 441 aa12.21□□□□□ -0.46
LIN54-207ENST00000508171 MYO1AQ9UBC5 1043 aa12.21□□□□□ -0.46
LIN54-207ENST00000508171 MYO6Q9UM54 1294 aa12.21□□□□□ -0.46
LIN54-207ENST00000508171 ESYT2A0FGR8 921 aa12.2□□□□□ -0.46
LIN54-207ENST00000508171 CCDC151A5D8V7 595 aa12.2□□□□□ -0.46
LIN54-207ENST00000508171 PPP1R11O60927 126 aaPredicted RBP12.2□□□□□ -0.46
LIN54-207ENST00000508171 ADRA2BP18089 450 aa12.2□□□□□ -0.46
LIN54-207ENST00000508171 SEMA3FQ13275 785 aa12.2□□□□□ -0.46
LIN54-207ENST00000508171 UBE2SQ16763 222 aa12.2□□□□□ -0.46
LIN54-207ENST00000508171 KCNK18Q7Z418 384 aa12.2□□□□□ -0.46
LIN54-207ENST00000508171 NOA1Q8NC60 698 aaKnown RBP12.2□□□□□ -0.46
LIN54-207ENST00000508171 NOC3LQ8WTT2 800 aaKnown RBP12.2□□□□□ -0.46
LIN54-207ENST00000508171 PCMTD1Q96MG8 357 aaPredicted RBP12.2□□□□□ -0.46
LIN54-207ENST00000508171 DUSP10Q9Y6W6 482 aa12.2□□□□□ -0.46
LIN54-207ENST00000508171 HOXA10P31260 410 aaPredicted RBP12.2□□□□□ -0.46
LIN54-207ENST00000508171 SLC16A2P36021 539 aa12.2□□□□□ -0.46
LIN54-207ENST00000508171 SCNN1DP51172 638 aa12.2□□□□□ -0.46
LIN54-207ENST00000508171 ADCY7P51828 1080 aa12.2□□□□□ -0.46
LIN54-207ENST00000508171 SMC1AQ14683 1233 aaKnown RBP12.2□□□□□ -0.46
LIN54-207ENST00000508171 MEA1Q16626 185 aa12.2□□□□□ -0.46
LIN54-207ENST00000508171 CCDC122Q5T0U0 273 aa12.2□□□□□ -0.46
LIN54-207ENST00000508171 ADGRF4Q8IZF3 695 aa12.2□□□□□ -0.46
LIN54-207ENST00000508171 GLIS3Q8NEA6 775 aa12.2□□□□□ -0.46
LIN54-207ENST00000508171 LACRTQ9GZZ8 138 aa12.2□□□□□ -0.46
LIN54-207ENST00000508171 NHEJ1Q9H9Q4 299 aaPredicted RBP12.2□□□□□ -0.46
LIN54-207ENST00000508171 JMJD4Q9H9V9 463 aa12.2□□□□□ -0.46
LIN54-207ENST00000508171 SUGCTQ9HAC7 445 aa12.2□□□□□ -0.46
LIN54-207ENST00000508171 MYH7BA7E2Y1 1941 aa12.2□□□□□ -0.46
LIN54-207ENST00000508171 SRGAP2O75044 1071 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 SNHG28P0DPA3 235 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 TNNI2P48788 182 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 CYP27A1Q02318 531 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 TUBB2AQ13885 445 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 CENPPQ6IPU0 288 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 CNNM4Q6P4Q7 775 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 LARP4BQ92615 738 aaKnown RBP12.19□□□□□ -0.46
LIN54-207ENST00000508171 TUBB2BQ9BVA1 445 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 HAUS4Q9H6D7 363 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 MYH10P35580 1976 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 CTAGE15A4D2H0 777 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 ERICH4A6NGS2 130 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 ATP1A1P05023 1023 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms