RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, human

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-205	ENST00000507316	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	5.78	□□□□□ -1.48
TUSC3-205	ENST00000507316	C12orf50	Q8NA57	414 aa	Predicted RBP	5.78	□□□□□ -1.48
TUSC3-205	ENST00000507316	PRPF38A	Q8NAV1	312 aa	Known RBP	5.78	□□□□□ -1.48
TUSC3-205	ENST00000507316	VPS37A	Q8NEZ2	397 aa		5.78	□□□□□ -1.48
TUSC3-205	ENST00000507316	EZH1	Q92800	747 aa	Predicted RBP	5.78	□□□□□ -1.48
TUSC3-205	ENST00000507316	MRRF	Q96E11	262 aa	Known RBP	5.78	□□□□□ -1.48
TUSC3-205	ENST00000507316	FAM46A	Q96IP4	442 aa	Known RBP	5.78	□□□□□ -1.48
TUSC3-205	ENST00000507316	FAM81B	Q96LP2	452 aa		5.78	□□□□□ -1.48
TUSC3-205	ENST00000507316	ALS2CR12	Q96Q35	445 aa		5.78	□□□□□ -1.48
TUSC3-205	ENST00000507316	CRBN	Q96SW2	442 aa		5.78	□□□□□ -1.48
TUSC3-205	ENST00000507316	MOV10L1	Q9BXT6	1211 aa	Known RBP	5.78	□□□□□ -1.48
TUSC3-205	ENST00000507316	UACA	Q9BZF9	1416 aa		5.78	□□□□□ -1.48
TUSC3-205	ENST00000507316	RSPH9	Q9H1X1	276 aa	Predicted RBP	5.78	□□□□□ -1.48
TUSC3-205	ENST00000507316	ATP6V0A4	Q9HBG4	840 aa		5.78	□□□□□ -1.48
TUSC3-205	ENST00000507316	FAN1	Q9Y2M0	1017 aa		5.78	□□□□□ -1.48
TUSC3-205	ENST00000507316	TMEM98	Q9Y2Y6	226 aa		5.78	□□□□□ -1.48
TUSC3-205	ENST00000507316	SUGT1	Q9Y2Z0	365 aa		5.78	□□□□□ -1.48
TUSC3-205	ENST00000507316	ATP6V0A2	Q9Y487	856 aa		5.78	□□□□□ -1.48
TUSC3-205	ENST00000507316	FHOD1	Q9Y613	1164 aa		5.78	□□□□□ -1.48
TUSC3-205	ENST00000507316	GPRASP1	Q5JY77	1395 aa		5.78	□□□□□ -1.48
TUSC3-205	ENST00000507316	FYCO1	Q9BQS8	1478 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	ERICH2	A1L162	156 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	BIN1	O00499	593 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	TM4SF5	O14894	197 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	CREB3	O43889	395 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	LUC7L3	O95232	432 aa	Known RBP	5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	VIL1	P09327	827 aa	Known RBP	5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	MCM3	P25205	808 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	ARHGAP25	P42331	645 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	NEK2	P51955	445 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	CTSW	P56202	376 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	SCRN1	Q12765	414 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	PABPC4	Q13310	644 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	PDE3A	Q14432	1141 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	CNGA3	Q16281	694 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	CLPP	Q16740	277 aa	Predicted RBP	5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	SH2D4B	Q5SQS7	431 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	ANKRD45	Q5TZF3	282 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	SLC30A9	Q6PML9	568 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	VN1R5	Q7Z5H4	357 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	UBE2Q1	Q7Z7E8	422 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	IQCA1	Q86XH1	822 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	PEX5L	Q8IYB4	626 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	LRRC56	Q8IYG6	542 aa	Predicted RBP	5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	STK11IP	Q8N1F8	1099 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	SMYD1	Q8NB12	490 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	ATP11C	Q8NB49	1132 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	NEK11	Q8NG66	645 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	USP33	Q8TEY7	942 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	KCNB2	Q92953	911 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	PPP2R3C	Q969Q6	453 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	THOC1	Q96FV9	657 aa	Known RBP	5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	MRFAP1L1	Q96HT8	127 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	SCLT1	Q96NL6	688 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	ASB16	Q96NS5	453 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	BHLHE41	Q9C0J9	482 aa	Predicted RBP	5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	LIN7B	Q9HAP6	207 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	CYP4F12	Q9HCS2	524 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	KIAA1522	Q9P206	1035 aa	Predicted RBP	5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	DDX25	Q9UHL0	483 aa	Known RBP	5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	DCTN4	Q9UJW0	460 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	ADAM21	Q9UKJ8	722 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	IKBKG	Q9Y6K9	419 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	CAMSAP2	Q08AD1	1489 aa		5.77	□□□□□ -1.49
TUSC3-205	ENST00000507316	GOLGA8A	A7E2F4	631 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	ECEL1	O95672	775 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	ESRRA	P11474	423 aa	Predicted RBP	5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	DES	P17661	470 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	XBP1	P17861	261 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	MAPK1	P28482	360 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	ATIC	P31939	592 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	CCT6A	P40227	531 aa	Known RBP	5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	KCNJ6	P48051	423 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	ARHGAP4	P98171	946 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	USH1G	Q495M9	461 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	CCDC158	Q5M9N0	1113 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	PEAR1	Q5VY43	1037 aa	Predicted RBP	5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	FBXO38	Q6PIJ6	1188 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	B4GALNT4	Q76KP1	1039 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	YTHDF3	Q7Z739	585 aa	Known RBP	5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	LUZP1	Q86V48	1076 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	CLEC10A	Q8IUN9	316 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	FAM20C	Q8IXL6	584 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	RPAP2	Q8IXW5	612 aa	Predicted RBP	5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	AGBL5	Q8NDL9	886 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	OR8K1	Q8NGG5	319 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	GIPC2	Q8TF65	315 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	TEKT4	Q8WW24	435 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	CCDC47	Q96A33	483 aa	Known RBP	5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	RBM17	Q96I25	401 aa	Known RBP	5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	CCDC114	Q96M63	670 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	SH3GL1	Q99961	368 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	SENP7	Q9BQF6	1050 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	TCHP	Q9BT92	498 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	LRRCC1	Q9C099	1032 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	CIDEB	Q9UHD4	219 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	LCMT1	Q9UIC8	334 aa		5.76	□□□□□ -1.49
TUSC3-205	ENST00000507316	DAAM1	Q9Y4D1	1078 aa		5.76	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms