RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 RBM25P49756 843 aaKnown RBP21.04■□□□□ 0.96
NPHP4-210ENST00000506941 AK2P54819 239 aa21.04■□□□□ 0.96
NPHP4-210ENST00000506941 PRAMEF19Q5SWL8 479 aa21.04■□□□□ 0.96
NPHP4-210ENST00000506941 RGS22Q8NE09 1264 aa21.04■□□□□ 0.96
NPHP4-210ENST00000506941 TMEM106CQ9BVX2 250 aa21.04■□□□□ 0.96
NPHP4-210ENST00000506941 NCOA5Q9HCD5 579 aaKnown RBP21.04■□□□□ 0.96
NPHP4-210ENST00000506941 HMX1Q9NP08 348 aaPredicted RBP21.04■□□□□ 0.96
NPHP4-210ENST00000506941 SEC63Q9UGP8 760 aaKnown RBP21.04■□□□□ 0.96
NPHP4-210ENST00000506941 SYNGAP1Q96PV0 1343 aa21.04■□□□□ 0.96
NPHP4-210ENST00000506941 SNAI1O95863 264 aaPredicted RBP21.03■□□□□ 0.96
NPHP4-210ENST00000506941 CCT2P78371 535 aaKnown RBP21.03■□□□□ 0.96
NPHP4-210ENST00000506941 PPP2R5BQ15173 497 aa21.03■□□□□ 0.96
NPHP4-210ENST00000506941 ZNF274Q96GC6 653 aaPredicted RBP21.03■□□□□ 0.96
NPHP4-210ENST00000506941 COL20A1Q9P218 1284 aa21.03■□□□□ 0.96
NPHP4-210ENST00000506941 DNAH12Q6ZR08 3092 aa21.03■□□□□ 0.96
NPHP4-210ENST00000506941 GJB1P08034 283 aa21.02■□□□□ 0.96
NPHP4-210ENST00000506941 NEK4P51957 841 aa21.02■□□□□ 0.96
NPHP4-210ENST00000506941 GHRHRQ02643 423 aa21.02■□□□□ 0.96
NPHP4-210ENST00000506941 NTRK3Q16288 839 aa21.02■□□□□ 0.96
NPHP4-210ENST00000506941 IFFO2Q5TF58 517 aa21.02■□□□□ 0.96
NPHP4-210ENST00000506941 ARMCX2Q7L311 632 aa21.02■□□□□ 0.96
NPHP4-210ENST00000506941 MSL3Q8N5Y2 521 aaKnown RBP21.02■□□□□ 0.96
NPHP4-210ENST00000506941 SHISA4Q96DD7 197 aa21.02■□□□□ 0.96
NPHP4-210ENST00000506941 DEFB118Q96PH6 123 aa21.02■□□□□ 0.96
NPHP4-210ENST00000506941 TPCN1Q9ULQ1 816 aa21.02■□□□□ 0.96
NPHP4-210ENST00000506941 CCDC196A0A1B0GTZ2 297 aa21.01■□□□□ 0.95
NPHP4-210ENST00000506941 EN2P19622 333 aaPredicted RBP21.01■□□□□ 0.95
NPHP4-210ENST00000506941 HSD17B4P51659 736 aa21.01■□□□□ 0.95
NPHP4-210ENST00000506941 STK3Q13188 491 aa21.01■□□□□ 0.95
NPHP4-210ENST00000506941 MCF2L2Q86YR7 1114 aa21.01■□□□□ 0.95
NPHP4-210ENST00000506941 SYTL5Q8TDW5 730 aaPredicted RBP21.01■□□□□ 0.95
NPHP4-210ENST00000506941 GPKOWQ92917 476 aaPredicted RBP eCLIP21.01■□□□□ 0.95
NPHP4-210ENST00000506941 BACH2Q9BYV9 841 aa21.01■□□□□ 0.95
NPHP4-210ENST00000506941 MAF1Q9H063 256 aa21.01■□□□□ 0.95
NPHP4-210ENST00000506941 CFBP00751 764 aa21■□□□□ 0.95
NPHP4-210ENST00000506941 ZNF865P0CJ78 1059 aaPredicted RBP21■□□□□ 0.95
NPHP4-210ENST00000506941 GJA8P48165 433 aa21■□□□□ 0.95
NPHP4-210ENST00000506941 ALDH5A1P51649 535 aaPredicted RBP21■□□□□ 0.95
NPHP4-210ENST00000506941 TRAF1Q13077 416 aa21■□□□□ 0.95
NPHP4-210ENST00000506941 U2AF1L4Q8WU68 220 aaKnown RBP21■□□□□ 0.95
NPHP4-210ENST00000506941 KATNBL1Q9H079 304 aa21■□□□□ 0.95
NPHP4-210ENST00000506941 CDKN2AIPQ9NXV6 580 aaPredicted RBP21■□□□□ 0.95
NPHP4-210ENST00000506941 V9GY48 417 aaPredicted RBP21■□□□□ 0.95
NPHP4-210ENST00000506941 PPFIA3O75145 1194 aa20.99■□□□□ 0.95
NPHP4-210ENST00000506941 HOXA13P31271 388 aaPredicted RBP20.99■□□□□ 0.95
NPHP4-210ENST00000506941 WWC2Q6AWC2 1192 aa20.99■□□□□ 0.95
NPHP4-210ENST00000506941 NOL8Q76FK4 1167 aaKnown RBP20.99■□□□□ 0.95
NPHP4-210ENST00000506941 PHKBQ93100 1093 aa20.99■□□□□ 0.95
NPHP4-210ENST00000506941 TAAR1Q96RJ0 339 aa20.99■□□□□ 0.95
NPHP4-210ENST00000506941 NRBP1Q9UHY1 535 aa20.99■□□□□ 0.95
NPHP4-210ENST00000506941 MYH7BA7E2Y1 1941 aa20.99■□□□□ 0.95
NPHP4-210ENST00000506941 ALPK3Q96L96 1907 aa20.99■□□□□ 0.95
NPHP4-210ENST00000506941 ASB14A6NK59 587 aa20.98■□□□□ 0.95
NPHP4-210ENST00000506941 LARGE1O95461 756 aa20.98■□□□□ 0.95
NPHP4-210ENST00000506941 SGPL1O95470 568 aa20.98■□□□□ 0.95
NPHP4-210ENST00000506941 CNGA1P29973 690 aa20.98■□□□□ 0.95
NPHP4-210ENST00000506941 ANKRD1Q15327 319 aa20.98■□□□□ 0.95
NPHP4-210ENST00000506941 LHX8Q68G74 356 aa20.98■□□□□ 0.95
NPHP4-210ENST00000506941 TYW1BQ6NUM6 668 aa20.98■□□□□ 0.95
NPHP4-210ENST00000506941 HEATR3Q7Z4Q2 680 aa20.98■□□□□ 0.95
NPHP4-210ENST00000506941 MORC4Q8TE76 937 aa20.98■□□□□ 0.95
NPHP4-210ENST00000506941 TBC1D32Q96NH3 1257 aa20.98■□□□□ 0.95
NPHP4-210ENST00000506941 CRISPLD2Q9H0B8 497 aa20.98■□□□□ 0.95
NPHP4-210ENST00000506941 ADD3Q9UEY8 706 aaKnown RBP20.98■□□□□ 0.95
NPHP4-210ENST00000506941 CNPY2Q9Y2B0 182 aa20.98■□□□□ 0.95
NPHP4-210ENST00000506941 DOCK5Q9H7D0 1870 aa20.97■□□□□ 0.95
NPHP4-210ENST00000506941 SEPT4O43236 478 aa20.97■□□□□ 0.95
NPHP4-210ENST00000506941 PFKFB2O60825 505 aa20.97■□□□□ 0.95
NPHP4-210ENST00000506941 IFNAR1P17181 557 aa20.97■□□□□ 0.95
NPHP4-210ENST00000506941 SCRN1Q12765 414 aa20.97■□□□□ 0.95
NPHP4-210ENST00000506941 PKN1Q16512 942 aa20.97■□□□□ 0.95
NPHP4-210ENST00000506941 DNERQ8NFT8 737 aa20.97■□□□□ 0.95
NPHP4-210ENST00000506941 UPF2Q9HAU5 1272 aaKnown RBP20.97■□□□□ 0.95
NPHP4-210ENST00000506941 DDX20Q9UHI6 824 aaKnown RBP20.97■□□□□ 0.95
NPHP4-210ENST00000506941 STXBP3O00186 592 aa20.96■□□□□ 0.95
NPHP4-210ENST00000506941 PRPF3O43395 683 aaKnown RBP20.96■□□□□ 0.95
NPHP4-210ENST00000506941 EDNRBP24530 442 aa20.96■□□□□ 0.95
NPHP4-210ENST00000506941 ACVR2BQ13705 512 aa20.96■□□□□ 0.95
NPHP4-210ENST00000506941 ME3Q16798 604 aa20.96■□□□□ 0.95
NPHP4-210ENST00000506941 ANO1Q5XXA6 986 aa20.96■□□□□ 0.95
NPHP4-210ENST00000506941 ABHD16BQ9H3Z7 469 aa20.96■□□□□ 0.95
NPHP4-210ENST00000506941 MAP3K20Q9NYL2 800 aaKnown RBP20.96■□□□□ 0.95
NPHP4-210ENST00000506941 ZHX1Q9UKY1 873 aaPredicted RBP20.96■□□□□ 0.95
NPHP4-210ENST00000506941 LOC102724159A0A0B4J2E5 919 aa20.95■□□□□ 0.94
NPHP4-210ENST00000506941 GCOM1H8Y6P7 765 aaPredicted RBP20.95■□□□□ 0.94
NPHP4-210ENST00000506941 ADCY6O43306 1168 aa20.95■□□□□ 0.94
NPHP4-210ENST00000506941 POLR2MP0CAP2 368 aa20.95■□□□□ 0.94
NPHP4-210ENST00000506941 PWP2Q15269 919 aaKnown RBP20.95■□□□□ 0.94
NPHP4-210ENST00000506941 PFKFB3Q16875 520 aaPredicted RBP20.95■□□□□ 0.94
NPHP4-210ENST00000506941 FBXO16Q8IX29 292 aaPredicted RBP20.95■□□□□ 0.94
NPHP4-210ENST00000506941 SAMD3Q8N6K7 520 aa20.95■□□□□ 0.94
NPHP4-210ENST00000506941 LENG1Q96BZ8 264 aaPredicted RBP20.95■□□□□ 0.94
NPHP4-210ENST00000506941 RMDN3Q96TC7 470 aa20.95■□□□□ 0.94
NPHP4-210ENST00000506941 SLC26A6Q9BXS9 759 aa20.95■□□□□ 0.94
NPHP4-210ENST00000506941 RNF26Q9BY78 433 aaPredicted RBP20.95■□□□□ 0.94
NPHP4-210ENST00000506941 SLKQ9H2G2 1235 aaPredicted RBP20.95■□□□□ 0.94
NPHP4-210ENST00000506941 PXMP2Q9NR77 195 aa20.95■□□□□ 0.94
NPHP4-210ENST00000506941 OGDHLQ9ULD0 1010 aa20.95■□□□□ 0.94
NPHP4-210ENST00000506941 MEIS2O14770 477 aa20.94■□□□□ 0.94
NPHP4-210ENST00000506941 TFRCP02786 760 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms