RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 FERMT2Q96AC1 680 aa10.67□□□□□ -0.7
PHF3-208ENST00000506783 RRP36Q96EU6 259 aaKnown RBP10.67□□□□□ -0.7
PHF3-208ENST00000506783 CEP95Q96GE4 821 aa10.67□□□□□ -0.7
PHF3-208ENST00000506783 CWC15Q9P013 229 aaKnown RBP10.67□□□□□ -0.7
PHF3-208ENST00000506783 RCCD1A6NED2 376 aa10.67□□□□□ -0.7
PHF3-208ENST00000506783 USO1O60763 962 aaKnown RBP10.67□□□□□ -0.7
PHF3-208ENST00000506783 ZBTB7AO95365 584 aa10.67□□□□□ -0.7
PHF3-208ENST00000506783 GDF11O95390 407 aa10.67□□□□□ -0.7
PHF3-208ENST00000506783 CALCRLQ16602 461 aa10.67□□□□□ -0.7
PHF3-208ENST00000506783 PARP10Q53GL7 1025 aa10.67□□□□□ -0.7
PHF3-208ENST00000506783 INTS5Q6P9B9 1019 aaKnown RBP10.67□□□□□ -0.7
PHF3-208ENST00000506783 SECISBP2LQ93073 1101 aaKnown RBP10.67□□□□□ -0.7
PHF3-208ENST00000506783 AP1M1Q9BXS5 423 aa10.67□□□□□ -0.7
PHF3-208ENST00000506783 IKZF4Q9H2S9 585 aa10.67□□□□□ -0.7
PHF3-208ENST00000506783 DISC1Q9NRI5 854 aa10.67□□□□□ -0.7
PHF3-208ENST00000506783 KIAA1024Q9UPX6 916 aa10.67□□□□□ -0.7
PHF3-208ENST00000506783 SPATA31A6Q5VVP1 1343 aa10.67□□□□□ -0.7
PHF3-208ENST00000506783 A0A1B0GTH6 734 aa10.67□□□□□ -0.7
PHF3-208ENST00000506783 E9PMD0 336 aa10.67□□□□□ -0.7
PHF3-208ENST00000506783 GTPBP6O43824 516 aaPredicted RBP10.67□□□□□ -0.7
PHF3-208ENST00000506783 GGCXP38435 758 aa10.67□□□□□ -0.7
PHF3-208ENST00000506783 SV2BQ7L1I2 683 aa10.67□□□□□ -0.7
PHF3-208ENST00000506783 TMEM139Q8IV31 216 aa10.67□□□□□ -0.7
PHF3-208ENST00000506783 REXO1Q8N1G1 1221 aaKnown RBP10.67□□□□□ -0.7
PHF3-208ENST00000506783 MRRFQ96E11 262 aaKnown RBP10.67□□□□□ -0.7
PHF3-208ENST00000506783 NUDT12Q9BQG2 462 aa10.67□□□□□ -0.7
PHF3-208ENST00000506783 PHF20Q9BVI0 1012 aa10.67□□□□□ -0.7
PHF3-208ENST00000506783 XRN1Q8IZH2 1706 aaKnown RBP10.66□□□□□ -0.7
PHF3-208ENST00000506783 PRPF3O43395 683 aaKnown RBP10.66□□□□□ -0.7
PHF3-208ENST00000506783 SERPINB2P05120 415 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 MMP10P09238 476 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 PDE6BP35913 854 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 GUCY2DQ02846 1103 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 NONOQ15233 471 aaKnown RBP eCLIP10.66□□□□□ -0.7
PHF3-208ENST00000506783 RBM26Q5T8P6 1007 aaKnown RBP10.66□□□□□ -0.7
PHF3-208ENST00000506783 KRT79Q5XKE5 535 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 ZNF34Q8IZ26 560 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 FUT8Q9BYC5 575 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 ZC3H12CQ9C0D7 883 aaKnown RBP10.66□□□□□ -0.7
PHF3-208ENST00000506783 DBNDD1Q9H9R9 158 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 NCAPD2Q15021 1401 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 CAMTA2O94983 1202 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 CALML3P27482 149 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 BAG6P46379 1132 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 ARHGAP44Q17R89 818 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 MB21D1Q8N884 522 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 FAM133AQ8N9E0 248 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 NYXQ9GZU5 481 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 ACBD3Q9H3P7 528 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 C6orf50Q9HD87 102 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 PPANQ9NQ55 473 aaKnown RBP10.66□□□□□ -0.7
PHF3-208ENST00000506783 TTF2Q9UNY4 1162 aaKnown RBP10.66□□□□□ -0.7
PHF3-208ENST00000506783 EPHB6O15197 1021 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 ACTN1P12814 892 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 ERCC5P28715 1186 aaPredicted RBP10.66□□□□□ -0.7
PHF3-208ENST00000506783 COPB2P35606 906 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 GJC1P36383 396 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 SSR1P43307 286 aaKnown RBP10.66□□□□□ -0.7
PHF3-208ENST00000506783 CDR1P51861 262 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 PRR16Q569H4 304 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 CCDC84Q86UT8 332 aaPredicted RBP10.66□□□□□ -0.7
PHF3-208ENST00000506783 ZNF384Q8TF68 577 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 RIOK1Q9BRS2 568 aaKnown RBP10.66□□□□□ -0.7
PHF3-208ENST00000506783 LRRC1Q9BTT6 524 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 DPH5Q9H2P9 285 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 HOMER2Q9NSB8 354 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 RBM28Q9NW13 759 aaKnown RBP10.66□□□□□ -0.7
PHF3-208ENST00000506783 RMND1Q9NWS8 449 aa10.66□□□□□ -0.7
PHF3-208ENST00000506783 MYBL2P10244 700 aa10.65□□□□□ -0.7
PHF3-208ENST00000506783 ZNF18P17022 549 aa10.65□□□□□ -0.7
PHF3-208ENST00000506783 TXLNBQ8N3L3 684 aa10.65□□□□□ -0.7
PHF3-208ENST00000506783 BCAS3Q9H6U6 928 aa10.65□□□□□ -0.7
PHF3-208ENST00000506783 ANKZF1Q9H8Y5 726 aa10.65□□□□□ -0.7
PHF3-208ENST00000506783 DMGDHQ9UI17 866 aaKnown RBP10.65□□□□□ -0.7
PHF3-208ENST00000506783 GOLGA6CA6NDK9 693 aa10.65□□□□□ -0.7
PHF3-208ENST00000506783 GOLGA6BA6NDN3 693 aa10.65□□□□□ -0.7
PHF3-208ENST00000506783 CEP104O60308 925 aa10.65□□□□□ -0.7
PHF3-208ENST00000506783 TACC1O75410 805 aa10.65□□□□□ -0.7
PHF3-208ENST00000506783 KRT14P02533 472 aa10.65□□□□□ -0.7
PHF3-208ENST00000506783 GOLGA6DP0CG33 693 aa10.65□□□□□ -0.7
PHF3-208ENST00000506783 FGFR2P21802 821 aa10.65□□□□□ -0.7
PHF3-208ENST00000506783 SPAG1Q07617 926 aa10.65□□□□□ -0.7
PHF3-208ENST00000506783 TRIM28Q13263 835 aaKnown RBP10.65□□□□□ -0.7
PHF3-208ENST00000506783 SEC23AQ15436 765 aa10.65□□□□□ -0.7
PHF3-208ENST00000506783 TMEM266Q2M3C6 531 aa10.65□□□□□ -0.7
PHF3-208ENST00000506783 CCDC93Q567U6 631 aa10.65□□□□□ -0.7
PHF3-208ENST00000506783 ZNF658Q5TYW1 1059 aaPredicted RBP10.65□□□□□ -0.7
PHF3-208ENST00000506783 CCDC25Q86WR0 208 aa10.65□□□□□ -0.7
PHF3-208ENST00000506783 TBC1D5Q92609 795 aa10.65□□□□□ -0.7
PHF3-208ENST00000506783 KRT12Q99456 494 aa10.65□□□□□ -0.7
PHF3-208ENST00000506783 BPIFA3Q9BQP9 254 aa10.65□□□□□ -0.7
PHF3-208ENST00000506783 GOLGA6AQ9NYA3 693 aa10.65□□□□□ -0.7
PHF3-208ENST00000506783 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.65□□□□□ -0.7
PHF3-208ENST00000506783 CYTH3O43739 400 aa10.65□□□□□ -0.71
PHF3-208ENST00000506783 OR52Z1P0C646 297 aa10.65□□□□□ -0.71
PHF3-208ENST00000506783 DDX42Q86XP3 938 aaKnown RBP eCLIP10.65□□□□□ -0.71
PHF3-208ENST00000506783 PIGOQ8TEQ8 1089 aa10.65□□□□□ -0.71
PHF3-208ENST00000506783 LSM14BQ9BX40 385 aaKnown RBP10.65□□□□□ -0.71
PHF3-208ENST00000506783 IL17RBQ9NRM6 502 aa10.65□□□□□ -0.71
PHF3-208ENST00000506783 PCDHAC2Q9Y5I4 1007 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms