RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 FAM153AQ9UHL3 310 aa18.99■□□□□ 0.63
SQSTM1-211ENST00000506690 COL22A1Q8NFW1 1626 aaPredicted RBP18.99■□□□□ 0.63
SQSTM1-211ENST00000506690 GLI1P08151 1106 aa18.99■□□□□ 0.63
SQSTM1-211ENST00000506690 ELF1P32519 619 aa18.99■□□□□ 0.63
SQSTM1-211ENST00000506690 MCM7P33993 719 aa18.99■□□□□ 0.63
SQSTM1-211ENST00000506690 CARSP49589 748 aaKnown RBP18.99■□□□□ 0.63
SQSTM1-211ENST00000506690 SEC24CP53992 1094 aa18.99■□□□□ 0.63
SQSTM1-211ENST00000506690 MIIPQ5JXC2 388 aa18.99■□□□□ 0.63
SQSTM1-211ENST00000506690 RNF187Q5TA31 235 aaPredicted RBP18.99■□□□□ 0.63
SQSTM1-211ENST00000506690 CSGALNACT2Q8N6G5 542 aa18.99■□□□□ 0.63
SQSTM1-211ENST00000506690 ATP6V1G3Q96LB4 118 aa18.99■□□□□ 0.63
SQSTM1-211ENST00000506690 PSMB7Q99436 277 aa18.99■□□□□ 0.63
SQSTM1-211ENST00000506690 DISC1Q9NRI5 854 aa18.99■□□□□ 0.63
SQSTM1-211ENST00000506690 CCDC155Q8N6L0 562 aa18.98■□□□□ 0.63
SQSTM1-211ENST00000506690 C4orf32Q8N8J7 132 aa18.98■□□□□ 0.63
SQSTM1-211ENST00000506690 DHTKD1Q96HY7 919 aaPredicted RBP18.98■□□□□ 0.63
SQSTM1-211ENST00000506690 TLR10Q9BXR5 811 aa18.98■□□□□ 0.63
SQSTM1-211ENST00000506690 SLC40A1Q9NP59 571 aa18.98■□□□□ 0.63
SQSTM1-211ENST00000506690 RBM28Q9NW13 759 aaKnown RBP18.98■□□□□ 0.63
SQSTM1-211ENST00000506690 NFU1Q9UMS0 254 aa18.98■□□□□ 0.63
SQSTM1-211ENST00000506690 ARAP2Q8WZ64 1704 aa18.98■□□□□ 0.63
SQSTM1-211ENST00000506690 MYL1P05976 194 aa18.98■□□□□ 0.63
SQSTM1-211ENST00000506690 KIF11P52732 1056 aa18.98■□□□□ 0.63
SQSTM1-211ENST00000506690 IFT88Q13099 833 aa18.98■□□□□ 0.63
SQSTM1-211ENST00000506690 PAK2Q13177 524 aa18.98■□□□□ 0.63
SQSTM1-211ENST00000506690 ITGB3BPQ13352 177 aaPredicted RBP18.98■□□□□ 0.63
SQSTM1-211ENST00000506690 PIK3AP1Q6ZUJ8 805 aa18.98■□□□□ 0.63
SQSTM1-211ENST00000506690 SYNE4Q8N205 404 aa18.98■□□□□ 0.63
SQSTM1-211ENST00000506690 ENAHQ8N8S7 591 aaPredicted RBP18.98■□□□□ 0.63
SQSTM1-211ENST00000506690 IQCDQ96DY2 449 aa18.98■□□□□ 0.63
SQSTM1-211ENST00000506690 ANKRD18BA2A2Z9 1011 aa18.97■□□□□ 0.63
SQSTM1-211ENST00000506690 HMGB1P1B2RPK0 211 aaPredicted RBP18.97■□□□□ 0.63
SQSTM1-211ENST00000506690 ESR2Q92731 530 aa18.97■□□□□ 0.63
SQSTM1-211ENST00000506690 CNOT6LQ96LI5 555 aaKnown RBP18.97■□□□□ 0.63
SQSTM1-211ENST00000506690 PJA2O43164 708 aa18.96■□□□□ 0.63
SQSTM1-211ENST00000506690 FKBP15Q5T1M5 1219 aa18.96■□□□□ 0.63
SQSTM1-211ENST00000506690 PPP4R3AQ6IN85 833 aa18.96■□□□□ 0.63
SQSTM1-211ENST00000506690 TYW1BQ6NUM6 668 aa18.96■□□□□ 0.63
SQSTM1-211ENST00000506690 PCMTD1Q96MG8 357 aaPredicted RBP18.96■□□□□ 0.63
SQSTM1-211ENST00000506690 PAPPAQ13219 1627 aa18.96■□□□□ 0.63
SQSTM1-211ENST00000506690 TMCO5BA8MYB1 307 aa18.96■□□□□ 0.63
SQSTM1-211ENST00000506690 NCK2O43639 380 aa18.96■□□□□ 0.63
SQSTM1-211ENST00000506690 FGFR2P21802 821 aa18.96■□□□□ 0.63
SQSTM1-211ENST00000506690 RASGRF1Q13972 1273 aa18.96■□□□□ 0.63
SQSTM1-211ENST00000506690 CEP85LQ5SZL2 805 aa18.96■□□□□ 0.63
SQSTM1-211ENST00000506690 TOM1L2Q6ZVM7 507 aa18.96■□□□□ 0.63
SQSTM1-211ENST00000506690 LPIN2Q92539 896 aa18.96■□□□□ 0.63
SQSTM1-211ENST00000506690 ACTR5Q9H9F9 607 aaPredicted RBP18.96■□□□□ 0.63
SQSTM1-211ENST00000506690 RNF14Q9UBS8 474 aa18.96■□□□□ 0.63
SQSTM1-211ENST00000506690 SALL4Q9UJQ4 1053 aa18.96■□□□□ 0.63
SQSTM1-211ENST00000506690 TROAPQ12815 778 aa18.95■□□□□ 0.62
SQSTM1-211ENST00000506690 CFAP221Q4G0U5 840 aa18.95■□□□□ 0.62
SQSTM1-211ENST00000506690 CATIPQ7Z7H3 387 aa18.95■□□□□ 0.62
SQSTM1-211ENST00000506690 FAM114A1Q8IWE2 563 aa18.95■□□□□ 0.62
SQSTM1-211ENST00000506690 ZSCAN10Q96SZ4 725 aaPredicted RBP18.95■□□□□ 0.62
SQSTM1-211ENST00000506690 NOC4LQ9BVI4 516 aaKnown RBP18.95■□□□□ 0.62
SQSTM1-211ENST00000506690 EPB41L5Q9HCM4 733 aa18.95■□□□□ 0.62
SQSTM1-211ENST00000506690 MYH3P11055 1940 aa18.95■□□□□ 0.62
SQSTM1-211ENST00000506690 PLCH1Q4KWH8 1693 aa18.95■□□□□ 0.62
SQSTM1-211ENST00000506690 HEXIM1O94992 359 aaKnown RBP18.95■□□□□ 0.62
SQSTM1-211ENST00000506690 CCNE1P24864 410 aa18.95■□□□□ 0.62
SQSTM1-211ENST00000506690 PUM3Q15397 648 aaKnown RBP18.95■□□□□ 0.62
SQSTM1-211ENST00000506690 KLHDC7AQ5VTJ3 777 aa18.95■□□□□ 0.62
SQSTM1-211ENST00000506690 TMTC3Q6ZXV5 915 aa18.95■□□□□ 0.62
SQSTM1-211ENST00000506690 C2CD5Q86YS7 1000 aa18.95■□□□□ 0.62
SQSTM1-211ENST00000506690 P2RX5Q93086 422 aa18.95■□□□□ 0.62
SQSTM1-211ENST00000506690 MIEF2Q96C03 454 aa18.95■□□□□ 0.62
SQSTM1-211ENST00000506690 KBTBD4Q9NVX7 518 aa18.95■□□□□ 0.62
SQSTM1-211ENST00000506690 ANAPC4Q9UJX5 808 aa18.95■□□□□ 0.62
SQSTM1-211ENST00000506690 CNTNAP5Q8WYK1 1306 aa18.95■□□□□ 0.62
SQSTM1-211ENST00000506690 ZSCAN5CA6NGD5 496 aaPredicted RBP18.94■□□□□ 0.62
SQSTM1-211ENST00000506690 NF2P35240 595 aa18.94■□□□□ 0.62
SQSTM1-211ENST00000506690 EIF4A3P38919 411 aaKnown RBP18.94■□□□□ 0.62
SQSTM1-211ENST00000506690 CTSWP56202 376 aa18.94■□□□□ 0.62
SQSTM1-211ENST00000506690 GUCY2DQ02846 1103 aa18.94■□□□□ 0.62
SQSTM1-211ENST00000506690 C3orf20Q8ND61 904 aa18.94■□□□□ 0.62
SQSTM1-211ENST00000506690 CYFIP2Q96F07 1278 aa18.94■□□□□ 0.62
SQSTM1-211ENST00000506690 EEF2KMTQ96G04 330 aa18.94■□□□□ 0.62
SQSTM1-211ENST00000506690 MS4A14Q96JA4 679 aa18.94■□□□□ 0.62
SQSTM1-211ENST00000506690 TSKSQ9UJT2 592 aa18.94■□□□□ 0.62
SQSTM1-211ENST00000506690 ODF2LQ9ULJ1 636 aa18.94■□□□□ 0.62
SQSTM1-211ENST00000506690 ESYT3A0FGR9 886 aa18.94■□□□□ 0.62
SQSTM1-211ENST00000506690 BICDL2A1A5D9 508 aa18.94■□□□□ 0.62
SQSTM1-211ENST00000506690 E7EVH7 732 aa18.94■□□□□ 0.62
SQSTM1-211ENST00000506690 MTIF2P46199 727 aaKnown RBP18.94■□□□□ 0.62
SQSTM1-211ENST00000506690 CDR1P51861 262 aa18.94■□□□□ 0.62
SQSTM1-211ENST00000506690 ANKRD40Q6AI12 368 aa18.94■□□□□ 0.62
SQSTM1-211ENST00000506690 MAGEC3Q8TD91 643 aa18.94■□□□□ 0.62
SQSTM1-211ENST00000506690 WHAMMQ8TF30 809 aa18.94■□□□□ 0.62
SQSTM1-211ENST00000506690 ZNF622Q969S3 477 aaKnown RBP eCLIP18.94■□□□□ 0.62
SQSTM1-211ENST00000506690 VEZTQ9HBM0 779 aa18.94■□□□□ 0.62
SQSTM1-211ENST00000506690 MRPL12P52815 198 aaKnown RBP18.93■□□□□ 0.62
SQSTM1-211ENST00000506690 IFIT1BQ5T764 474 aaKnown RBP18.93■□□□□ 0.62
SQSTM1-211ENST00000506690 EP400NLQ6ZTU2 488 aa18.93■□□□□ 0.62
SQSTM1-211ENST00000506690 IQCA1Q86XH1 822 aa18.93■□□□□ 0.62
SQSTM1-211ENST00000506690 IFT81Q8WYA0 676 aa18.93■□□□□ 0.62
SQSTM1-211ENST00000506690 N4BP2L2Q92802 583 aaPredicted RBP18.93■□□□□ 0.62
SQSTM1-211ENST00000506690 DLEC1Q9Y238 1755 aa18.93■□□□□ 0.62
SQSTM1-211ENST00000506690 ADAMTS3O15072 1205 aa18.93■□□□□ 0.62
SQSTM1-211ENST00000506690 NKRFO15226 690 aaKnown RBP eCLIP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms