RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 LRRC37A2A6NM11 1700 aa17.13■□□□□ 0.33
SEC24D-208ENST00000506622 CCDC171Q6TFL3 1326 aa17.12■□□□□ 0.33
SEC24D-208ENST00000506622 NFIBO00712 420 aa17.12■□□□□ 0.33
SEC24D-208ENST00000506622 PDHBP11177 359 aa17.12■□□□□ 0.33
SEC24D-208ENST00000506622 PTGS1P23219 599 aa17.12■□□□□ 0.33
SEC24D-208ENST00000506622 CALML3P27482 149 aa17.12■□□□□ 0.33
SEC24D-208ENST00000506622 ALDH5A1P51649 535 aaPredicted RBP17.12■□□□□ 0.33
SEC24D-208ENST00000506622 DUSP28Q4G0W2 176 aa17.12■□□□□ 0.33
SEC24D-208ENST00000506622 AKNAD1Q5T1N1 836 aa17.12■□□□□ 0.33
SEC24D-208ENST00000506622 RASIP1Q5U651 963 aa17.12■□□□□ 0.33
SEC24D-208ENST00000506622 ZNF589Q86UQ0 364 aaPredicted RBP17.12■□□□□ 0.33
SEC24D-208ENST00000506622 MPHOSPH6Q99547 160 aaKnown RBP17.12■□□□□ 0.33
SEC24D-208ENST00000506622 WDR11Q9BZH6 1224 aa17.12■□□□□ 0.33
SEC24D-208ENST00000506622 MTIF3Q9H2K0 278 aaKnown RBP17.12■□□□□ 0.33
SEC24D-208ENST00000506622 RNF41Q9H4P4 317 aaPredicted RBP17.12■□□□□ 0.33
SEC24D-208ENST00000506622 CHD7Q9P2D1 2997 aa17.11■□□□□ 0.33
SEC24D-208ENST00000506622 GRIN2DO15399 1336 aa17.11■□□□□ 0.33
SEC24D-208ENST00000506622 GRXCR1A8MXD5 290 aa17.11■□□□□ 0.33
SEC24D-208ENST00000506622 FGBP02675 491 aa17.11■□□□□ 0.33
SEC24D-208ENST00000506622 PSMC6P62333 389 aa17.11■□□□□ 0.33
SEC24D-208ENST00000506622 AAMPQ13685 434 aa17.11■□□□□ 0.33
SEC24D-208ENST00000506622 TMEM63BQ5T3F8 832 aa17.11■□□□□ 0.33
SEC24D-208ENST00000506622 RNF207Q6ZRF8 634 aa17.11■□□□□ 0.33
SEC24D-208ENST00000506622 PBX4Q9BYU1 374 aa17.11■□□□□ 0.33
SEC24D-208ENST00000506622 TRPV6Q9H1D0 765 aa17.11■□□□□ 0.33
SEC24D-208ENST00000506622 POLR3EQ9NVU0 708 aa17.11■□□□□ 0.33
SEC24D-208ENST00000506622 MUC3AQ02505 3323 aa17.1■□□□□ 0.33
SEC24D-208ENST00000506622 CPT1AP50416 773 aa17.1■□□□□ 0.33
SEC24D-208ENST00000506622 ZNF543Q08ER8 600 aa17.1■□□□□ 0.33
SEC24D-208ENST00000506622 BRDTQ58F21 947 aaPredicted RBP17.1■□□□□ 0.33
SEC24D-208ENST00000506622 B4GALNT3Q6L9W6 998 aa17.1■□□□□ 0.33
SEC24D-208ENST00000506622 HERVK_113Q902F9 699 aa17.1■□□□□ 0.33
SEC24D-208ENST00000506622 ESR2Q92731 530 aa17.1■□□□□ 0.33
SEC24D-208ENST00000506622 RWDD1Q9H446 243 aaPredicted RBP17.1■□□□□ 0.33
SEC24D-208ENST00000506622 GPHNQ9NQX3 736 aaPredicted RBP17.1■□□□□ 0.33
SEC24D-208ENST00000506622 MSRAQ9UJ68 235 aa17.1■□□□□ 0.33
SEC24D-208ENST00000506622 B4DLN1 442 aa17.09■□□□□ 0.33
SEC24D-208ENST00000506622 ZNF213O14771 459 aa17.09■□□□□ 0.33
SEC24D-208ENST00000506622 B4GALT4O60513 344 aa17.09■□□□□ 0.33
SEC24D-208ENST00000506622 SDSP20132 328 aa17.09■□□□□ 0.33
SEC24D-208ENST00000506622 PBX2P40425 430 aa17.09■□□□□ 0.33
SEC24D-208ENST00000506622 MRPL12P52815 198 aaKnown RBP17.09■□□□□ 0.33
SEC24D-208ENST00000506622 CCL23P55773 120 aa17.09■□□□□ 0.33
SEC24D-208ENST00000506622 PDE4DQ08499 809 aa17.09■□□□□ 0.33
SEC24D-208ENST00000506622 RAB30Q15771 203 aa17.09■□□□□ 0.33
SEC24D-208ENST00000506622 GPATCH4Q5T3I0 446 aaKnown RBP17.09■□□□□ 0.33
SEC24D-208ENST00000506622 SLC30A10Q6XR72 485 aa17.09■□□□□ 0.33
SEC24D-208ENST00000506622 RPUSD2Q8IZ73 545 aaKnown RBP17.09■□□□□ 0.33
SEC24D-208ENST00000506622 CLEC4DQ8WXI8 215 aa17.09■□□□□ 0.33
SEC24D-208ENST00000506622 GAS2L1Q99501 681 aaPredicted RBP17.09■□□□□ 0.33
SEC24D-208ENST00000506622 NOC4LQ9BVI4 516 aaKnown RBP17.09■□□□□ 0.33
SEC24D-208ENST00000506622 NCOR1O75376 2440 aa17.09■□□□□ 0.33
SEC24D-208ENST00000506622 UMODL1Q5DID0 1318 aa17.08■□□□□ 0.33
SEC24D-208ENST00000506622 WDR19Q8NEZ3 1342 aa17.08■□□□□ 0.33
SEC24D-208ENST00000506622 RBM47A0AV96 593 aaKnown RBP17.08■□□□□ 0.32
SEC24D-208ENST00000506622 MYL3P08590 195 aa17.08■□□□□ 0.32
SEC24D-208ENST00000506622 SUPT20HL2P0C7V6 817 aa17.08■□□□□ 0.32
SEC24D-208ENST00000506622 SNHG28P0DPA3 235 aa17.08■□□□□ 0.32
SEC24D-208ENST00000506622 RPS6P62753 249 aaKnown RBP17.08■□□□□ 0.32
SEC24D-208ENST00000506622 CCDC178Q5BJE1 867 aa17.08■□□□□ 0.32
SEC24D-208ENST00000506622 OTOP2Q7RTS6 562 aa17.08■□□□□ 0.32
SEC24D-208ENST00000506622 TBC1D10CQ8IV04 446 aa17.08■□□□□ 0.32
SEC24D-208ENST00000506622 DNERQ8NFT8 737 aa17.08■□□□□ 0.32
SEC24D-208ENST00000506622 OR6J1Q8NGC5 347 aa17.08■□□□□ 0.32
SEC24D-208ENST00000506622 ALDH8A1Q9H2A2 487 aaPredicted RBP17.08■□□□□ 0.32
SEC24D-208ENST00000506622 RAD50Q92878 1312 aa17.07■□□□□ 0.32
SEC24D-208ENST00000506622 TRANK1O15050 2925 aa17.07■□□□□ 0.32
SEC24D-208ENST00000506622 NKRFO15226 690 aaKnown RBP eCLIP17.07■□□□□ 0.32
SEC24D-208ENST00000506622 NT5C2P49902 561 aa17.07■□□□□ 0.32
SEC24D-208ENST00000506622 PPP2R5BQ15173 497 aa17.07■□□□□ 0.32
SEC24D-208ENST00000506622 IQCA1Q86XH1 822 aa17.07■□□□□ 0.32
SEC24D-208ENST00000506622 DGKHQ86XP1 1220 aa17.07■□□□□ 0.32
SEC24D-208ENST00000506622 SMC5Q8IY18 1101 aa17.07■□□□□ 0.32
SEC24D-208ENST00000506622 ZKSCAN3Q9BRR0 538 aa17.07■□□□□ 0.32
SEC24D-208ENST00000506622 MTG1Q9BT17 334 aaPredicted RBP17.07■□□□□ 0.32
SEC24D-208ENST00000506622 CXXC1Q9P0U4 656 aaPredicted RBP17.07■□□□□ 0.32
SEC24D-208ENST00000506622 MYH6P13533 1939 aa17.07■□□□□ 0.32
SEC24D-208ENST00000506622 GBF1Q92538 1859 aa17.07■□□□□ 0.32
SEC24D-208ENST00000506622 GOLGA8HP0CJ92 632 aa17.06■□□□□ 0.32
SEC24D-208ENST00000506622 PURAQ00577 322 aaKnown RBP17.06■□□□□ 0.32
SEC24D-208ENST00000506622 USH1GQ495M9 461 aa17.06■□□□□ 0.32
SEC24D-208ENST00000506622 CWC27Q6UX04 472 aaKnown RBP17.06■□□□□ 0.32
SEC24D-208ENST00000506622 CHD1LQ86WJ1 897 aa17.06■□□□□ 0.32
SEC24D-208ENST00000506622 SCFD2Q8WU76 684 aa17.06■□□□□ 0.32
SEC24D-208ENST00000506622 SYMPKQ92797 1274 aaKnown RBP17.06■□□□□ 0.32
SEC24D-208ENST00000506622 WNT8AQ9H1J5 351 aa17.06■□□□□ 0.32
SEC24D-208ENST00000506622 PRDM12Q9H4Q4 367 aa17.06■□□□□ 0.32
SEC24D-208ENST00000506622 SLC28A3Q9HAS3 691 aa17.06■□□□□ 0.32
SEC24D-208ENST00000506622 DIAPH3Q9NSV4 1193 aa17.06■□□□□ 0.32
SEC24D-208ENST00000506622 TRMT13Q9NUP7 481 aaKnown RBP17.06■□□□□ 0.32
SEC24D-208ENST00000506622 TNKSO95271 1327 aa17.06■□□□□ 0.32
SEC24D-208ENST00000506622 KPNA6O60684 536 aa17.05■□□□□ 0.32
SEC24D-208ENST00000506622 FAM47CQ5HY64 1035 aa17.05■□□□□ 0.32
SEC24D-208ENST00000506622 PLEKHM2Q8IWE5 1019 aa17.05■□□□□ 0.32
SEC24D-208ENST00000506622 PNMA1Q8ND90 353 aa17.05■□□□□ 0.32
SEC24D-208ENST00000506622 RGS22Q8NE09 1264 aa17.05■□□□□ 0.32
SEC24D-208ENST00000506622 SCLYQ96I15 445 aa17.05■□□□□ 0.32
SEC24D-208ENST00000506622 UBA5Q9GZZ9 404 aa17.05■□□□□ 0.32
SEC24D-208ENST00000506622 OSBPL3Q9H4L5 887 aa17.05■□□□□ 0.32
SEC24D-208ENST00000506622 KAT14Q9H8E8 782 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms