RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 CPXCR1Q8N123 301 aa8.26□□□□□ -1.09
NUP54-204ENST00000506098 SHCBP1Q8NEM2 672 aa8.26□□□□□ -1.09
NUP54-204ENST00000506098 CHST13Q8NET6 341 aa8.26□□□□□ -1.09
NUP54-204ENST00000506098 OXER1Q8TDS5 423 aa8.26□□□□□ -1.09
NUP54-204ENST00000506098 TRERF1Q96PN7 1200 aa8.26□□□□□ -1.09
NUP54-204ENST00000506098 CFHR5Q9BXR6 569 aa8.26□□□□□ -1.09
NUP54-204ENST00000506098 ZMYND15Q9H091 742 aa8.26□□□□□ -1.09
NUP54-204ENST00000506098 PSTPIP2Q9H939 334 aa8.26□□□□□ -1.09
NUP54-204ENST00000506098 BRMS1Q9HCU9 246 aa8.26□□□□□ -1.09
NUP54-204ENST00000506098 TXNRD2Q9NNW7 524 aa8.26□□□□□ -1.09
NUP54-204ENST00000506098 PCDHA6Q9UN73 950 aa8.26□□□□□ -1.09
NUP54-204ENST00000506098 RIPK3Q9Y572 518 aa8.26□□□□□ -1.09
NUP54-204ENST00000506098 PCDHA8Q9Y5H6 950 aa8.26□□□□□ -1.09
NUP54-204ENST00000506098 FRMPD3Q5JV73 1810 aa8.26□□□□□ -1.09
NUP54-204ENST00000506098 CA12O43570 354 aa8.25□□□□□ -1.09
NUP54-204ENST00000506098 TLR2O60603 784 aa8.25□□□□□ -1.09
NUP54-204ENST00000506098 AOC2O75106 756 aa8.25□□□□□ -1.09
NUP54-204ENST00000506098 FOSP01100 380 aaPredicted RBP8.25□□□□□ -1.09
NUP54-204ENST00000506098 BCRP11274 1271 aa8.25□□□□□ -1.09
NUP54-204ENST00000506098 ALAS1P13196 640 aa8.25□□□□□ -1.09
NUP54-204ENST00000506098 HSPA6P17066 643 aa8.25□□□□□ -1.09
NUP54-204ENST00000506098 VEGFBP49765 207 aa8.25□□□□□ -1.09
NUP54-204ENST00000506098 FOSBP53539 338 aa8.25□□□□□ -1.09
NUP54-204ENST00000506098 C1QTNF8P60827 252 aa8.25□□□□□ -1.09
NUP54-204ENST00000506098 NR5A1Q13285 461 aa8.25□□□□□ -1.09
NUP54-204ENST00000506098 TAF1CQ15572 869 aaPredicted RBP8.25□□□□□ -1.09
NUP54-204ENST00000506098 FAM110CQ1W6H9 321 aa8.25□□□□□ -1.09
NUP54-204ENST00000506098 MUM1L1Q5H9M0 696 aa8.25□□□□□ -1.09
NUP54-204ENST00000506098 C17orf99Q6UX52 265 aa8.25□□□□□ -1.09
NUP54-204ENST00000506098 PAXIP1Q6ZW49 1069 aaPredicted RBP8.25□□□□□ -1.09
NUP54-204ENST00000506098 NOSTRINQ8IVI9 506 aa8.25□□□□□ -1.09
NUP54-204ENST00000506098 REXO1Q8N1G1 1221 aaKnown RBP8.25□□□□□ -1.09
NUP54-204ENST00000506098 SMCR8Q8TEV9 937 aaPredicted RBP8.25□□□□□ -1.09
NUP54-204ENST00000506098 MOV10L1Q9BXT6 1211 aaKnown RBP8.25□□□□□ -1.09
NUP54-204ENST00000506098 ACAD9Q9H845 621 aa8.25□□□□□ -1.09
NUP54-204ENST00000506098 RNF146Q9NTX7 359 aa8.25□□□□□ -1.09
NUP54-204ENST00000506098 FBXO40Q9UH90 709 aa8.25□□□□□ -1.09
NUP54-204ENST00000506098 GCOM1H8Y6P7 765 aaPredicted RBP8.24□□□□□ -1.09
NUP54-204ENST00000506098 NFIBO00712 420 aa8.24□□□□□ -1.09
NUP54-204ENST00000506098 POLR2MP0CAP2 368 aa8.24□□□□□ -1.09
NUP54-204ENST00000506098 TAL1P17542 331 aaPredicted RBP8.24□□□□□ -1.09
NUP54-204ENST00000506098 CCNA1P78396 465 aa8.24□□□□□ -1.09
NUP54-204ENST00000506098 AP3B2Q13367 1082 aa8.24□□□□□ -1.09
NUP54-204ENST00000506098 PLS1Q14651 629 aa8.24□□□□□ -1.09
NUP54-204ENST00000506098 EARS2Q5JPH6 523 aaKnown RBP8.24□□□□□ -1.09
NUP54-204ENST00000506098 MYSM1Q5VVJ2 828 aa8.24□□□□□ -1.09
NUP54-204ENST00000506098 ATL3Q6DD88 541 aa8.24□□□□□ -1.09
NUP54-204ENST00000506098 MCTP1Q6DN14 999 aa8.24□□□□□ -1.09
NUP54-204ENST00000506098 KRT25Q7Z3Z0 450 aa8.24□□□□□ -1.09
NUP54-204ENST00000506098 FERMT3Q86UX7 667 aa8.24□□□□□ -1.09
NUP54-204ENST00000506098 GPRC5AQ8NFJ5 357 aa8.24□□□□□ -1.09
NUP54-204ENST00000506098 CRYGNQ8WXF5 182 aa8.24□□□□□ -1.09
NUP54-204ENST00000506098 TBC1D5Q92609 795 aa8.24□□□□□ -1.09
NUP54-204ENST00000506098 PAGR1Q9BTK6 254 aa8.24□□□□□ -1.09
NUP54-204ENST00000506098 MROH8Q9H579 483 aa8.24□□□□□ -1.09
NUP54-204ENST00000506098 ZFYVE28Q9HCC9 887 aa8.24□□□□□ -1.09
NUP54-204ENST00000506098 BIN2Q9UBW5 565 aaPredicted RBP8.24□□□□□ -1.09
NUP54-204ENST00000506098 ATP6V1DQ9Y5K8 247 aa8.24□□□□□ -1.09
NUP54-204ENST00000506098 PFASO15067 1338 aa8.24□□□□□ -1.09
NUP54-204ENST00000506098 FRMPD4Q14CM0 1322 aa8.24□□□□□ -1.09
NUP54-204ENST00000506098 ARID2Q68CP9 1835 aa8.24□□□□□ -1.09
NUP54-204ENST00000506098 STRNO43815 780 aa8.23□□□□□ -1.09
NUP54-204ENST00000506098 PEX10O60683 326 aa8.23□□□□□ -1.09
NUP54-204ENST00000506098 CFBP00751 764 aa8.23□□□□□ -1.09
NUP54-204ENST00000506098 ERCC3P19447 782 aa8.23□□□□□ -1.09
NUP54-204ENST00000506098 TRAPPC10P48553 1259 aa8.23□□□□□ -1.09
NUP54-204ENST00000506098 TOB1P50616 345 aaPredicted RBP8.23□□□□□ -1.09
NUP54-204ENST00000506098 HTRA3P83110 453 aa8.23□□□□□ -1.09
NUP54-204ENST00000506098 CRHR2Q13324 411 aa8.23□□□□□ -1.09
NUP54-204ENST00000506098 GNL2Q13823 731 aaKnown RBP8.23□□□□□ -1.09
NUP54-204ENST00000506098 NONOQ15233 471 aaKnown RBP eCLIP8.23□□□□□ -1.09
NUP54-204ENST00000506098 UBE2SQ16763 222 aa8.23□□□□□ -1.09
NUP54-204ENST00000506098 NOM1Q5C9Z4 860 aaKnown RBP8.23□□□□□ -1.09
NUP54-204ENST00000506098 RILPL1Q5EBL4 403 aa8.23□□□□□ -1.09
NUP54-204ENST00000506098 USP17L6PQ6QN14 398 aa8.23□□□□□ -1.09
NUP54-204ENST00000506098 RNF207Q6ZRF8 634 aa8.23□□□□□ -1.09
NUP54-204ENST00000506098 ABRAQ8N0Z2 381 aa8.23□□□□□ -1.09
NUP54-204ENST00000506098 ANKRD13CQ8N6S4 541 aa8.23□□□□□ -1.09
NUP54-204ENST00000506098 RASGRP4Q8TDF6 673 aa8.23□□□□□ -1.09
NUP54-204ENST00000506098 TNPO1Q92973 898 aaKnown RBP8.23□□□□□ -1.09
NUP54-204ENST00000506098 A1CFQ9NQ94 594 aaKnown RBP8.23□□□□□ -1.09
NUP54-204ENST00000506098 CYP39A1Q9NYL5 469 aa8.23□□□□□ -1.09
NUP54-204ENST00000506098 MORC2Q9Y6X9 1032 aaPredicted RBP8.23□□□□□ -1.09
NUP54-204ENST00000506098 EVPLQ92817 2033 aa8.23□□□□□ -1.09
NUP54-204ENST00000506098 RPTORQ8N122 1335 aa8.23□□□□□ -1.09
NUP54-204ENST00000506098 PCNTO95613 3336 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 DNAJC25-GNG10A0A024R161 153 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 CCDC194A0A1B0GVG4 234 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 FAM205CA6NFA0 338 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 EDIL3O43854 480 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 CYP3A4P08684 503 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 MAPK4P31152 587 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 HOXA13P31271 388 aaPredicted RBP8.22□□□□□ -1.09
NUP54-204ENST00000506098 SREBF1P36956 1147 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 USP11P51784 963 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 RPS6P62753 249 aaKnown RBP8.22□□□□□ -1.09
NUP54-204ENST00000506098 RBM10P98175 930 aaKnown RBP8.22□□□□□ -1.09
NUP54-204ENST00000506098 GRM1Q13255 1194 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 ORC2Q13416 577 aaPredicted RBP8.22□□□□□ -1.09
NUP54-204ENST00000506098 BAATQ14032 418 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms