RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 PPIL6Q8IXY8 311 aa8.43□□□□□ -1.06
NIPBL-205ENST00000505998 KREMEN2Q8NCW0 462 aa8.43□□□□□ -1.06
NIPBL-205ENST00000505998 OSBP2Q969R2 916 aa8.43□□□□□ -1.06
NIPBL-205ENST00000505998 SLC26A8Q96RN1 970 aa8.43□□□□□ -1.06
NIPBL-205ENST00000505998 TRBV23-1A0A0A0MS06 115 aa8.42□□□□□ -1.06
NIPBL-205ENST00000505998 TAL1P17542 331 aaPredicted RBP8.42□□□□□ -1.06
NIPBL-205ENST00000505998 XP32Q5T750 250 aa8.42□□□□□ -1.06
NIPBL-205ENST00000505998 ACBD5Q5T8D3 534 aaPredicted RBP8.42□□□□□ -1.06
NIPBL-205ENST00000505998 ZSWIM2Q8NEG5 633 aa8.42□□□□□ -1.06
NIPBL-205ENST00000505998 NUP43Q8NFH3 380 aa8.42□□□□□ -1.06
NIPBL-205ENST00000505998 DIO2Q92813 273 aa8.42□□□□□ -1.06
NIPBL-205ENST00000505998 C1orf159Q96HA4 380 aa8.42□□□□□ -1.06
NIPBL-205ENST00000505998 PLCD4Q9BRC7 762 aa8.42□□□□□ -1.06
NIPBL-205ENST00000505998 RNF32Q9H0A6 362 aa8.42□□□□□ -1.06
NIPBL-205ENST00000505998 IMPACTQ9P2X3 320 aa8.42□□□□□ -1.06
NIPBL-205ENST00000505998 MROH2BQ7Z745 1585 aa8.42□□□□□ -1.06
NIPBL-205ENST00000505998 CC2D2AQ9P2K1 1620 aa8.42□□□□□ -1.06
NIPBL-205ENST00000505998 NPHS1O60500 1241 aa8.41□□□□□ -1.06
NIPBL-205ENST00000505998 PRKCAP17252 672 aa8.41□□□□□ -1.06
NIPBL-205ENST00000505998 KCNAB2Q13303 367 aa8.41□□□□□ -1.06
NIPBL-205ENST00000505998 FAM209AQ5JX71 171 aa8.41□□□□□ -1.06
NIPBL-205ENST00000505998 FOXB2Q5VYV0 432 aa8.41□□□□□ -1.06
NIPBL-205ENST00000505998 USP53Q70EK8 1073 aa8.41□□□□□ -1.06
NIPBL-205ENST00000505998 NOP9Q86U38 636 aaKnown RBP8.41□□□□□ -1.06
NIPBL-205ENST00000505998 NLRX1Q86UT6 975 aa8.41□□□□□ -1.06
NIPBL-205ENST00000505998 SIRT2Q8IXJ6 389 aa8.41□□□□□ -1.06
NIPBL-205ENST00000505998 JMYQ8N9B5 988 aa8.41□□□□□ -1.06
NIPBL-205ENST00000505998 SH3TC2Q8TF17 1288 aa8.41□□□□□ -1.06
NIPBL-205ENST00000505998 FAM168AQ92567 244 aa8.41□□□□□ -1.06
NIPBL-205ENST00000505998 ASIC4Q96FT7 647 aa8.41□□□□□ -1.06
NIPBL-205ENST00000505998 TMEFF2Q9UIK5 374 aaPredicted RBP8.41□□□□□ -1.06
NIPBL-205ENST00000505998 HMGXB3Q12766 1538 aa8.4□□□□□ -1.06
NIPBL-205ENST00000505998 GLI1P08151 1106 aa8.4□□□□□ -1.06
NIPBL-205ENST00000505998 GALK1P51570 392 aa8.4□□□□□ -1.06
NIPBL-205ENST00000505998 SUMO1P63165 101 aaKnown RBP8.4□□□□□ -1.06
NIPBL-205ENST00000505998 KIR3DS1Q14943 382 aa8.4□□□□□ -1.06
NIPBL-205ENST00000505998 DENND5AQ6IQ26 1287 aa8.4□□□□□ -1.06
NIPBL-205ENST00000505998 EXOC2Q96KP1 924 aa8.4□□□□□ -1.06
NIPBL-205ENST00000505998 DHRS4Q9BTZ2 278 aa8.4□□□□□ -1.06
NIPBL-205ENST00000505998 ACSL6Q9UKU0 697 aa8.4□□□□□ -1.06
NIPBL-205ENST00000505998 PTCH2Q9Y6C5 1203 aa8.4□□□□□ -1.06
NIPBL-205ENST00000505998 SMARCA2P51531 1590 aa8.39□□□□□ -1.07
NIPBL-205ENST00000505998 A0A1W2PQJ5 194 aa8.39□□□□□ -1.07
NIPBL-205ENST00000505998 C7orf72A4D263 438 aa8.39□□□□□ -1.07
NIPBL-205ENST00000505998 EFEMP2O95967 443 aa8.39□□□□□ -1.07
NIPBL-205ENST00000505998 LTBRP36941 435 aa8.39□□□□□ -1.07
NIPBL-205ENST00000505998 ARL4AP40617 200 aa8.39□□□□□ -1.07
NIPBL-205ENST00000505998 CORO7P57737 925 aa8.39□□□□□ -1.07
NIPBL-205ENST00000505998 RBM10P98175 930 aaKnown RBP8.39□□□□□ -1.07
NIPBL-205ENST00000505998 INF2Q27J81 1249 aa8.39□□□□□ -1.07
NIPBL-205ENST00000505998 MBLAC2Q68D91 279 aa8.39□□□□□ -1.07
NIPBL-205ENST00000505998 CCDC103Q8IW40 242 aa8.39□□□□□ -1.07
NIPBL-205ENST00000505998 NLGN2Q8NFZ4 835 aa8.39□□□□□ -1.07
NIPBL-205ENST00000505998 SHISA4Q96DD7 197 aa8.39□□□□□ -1.07
NIPBL-205ENST00000505998 CRTAC1Q9NQ79 661 aa8.39□□□□□ -1.07
NIPBL-205ENST00000505998 YBX2Q9Y2T7 364 aaKnown RBP8.39□□□□□ -1.07
NIPBL-205ENST00000505998 PNLIPP16233 465 aa8.38□□□□□ -1.07
NIPBL-205ENST00000505998 CYP4F8P98187 520 aa8.38□□□□□ -1.07
NIPBL-205ENST00000505998 MVKQ03426 396 aa8.38□□□□□ -1.07
NIPBL-205ENST00000505998 TESK1Q15569 626 aa8.38□□□□□ -1.07
NIPBL-205ENST00000505998 DCAF4Q8WV16 495 aa8.38□□□□□ -1.07
NIPBL-205ENST00000505998 SLC6A17Q9H1V8 727 aa8.38□□□□□ -1.07
NIPBL-205ENST00000505998 MRPS23Q9Y3D9 190 aaKnown RBP8.38□□□□□ -1.07
NIPBL-205ENST00000505998 CCDC163A0A0D9SF12 145 aa8.37□□□□□ -1.07
NIPBL-205ENST00000505998 BLACEA4D250 179 aa8.37□□□□□ -1.07
NIPBL-205ENST00000505998 ARNTLO00327 626 aa8.37□□□□□ -1.07
NIPBL-205ENST00000505998 MYO1BO43795 1136 aa8.37□□□□□ -1.07
NIPBL-205ENST00000505998 NTRK3Q16288 839 aa8.37□□□□□ -1.07
NIPBL-205ENST00000505998 MCTP1Q6DN14 999 aa8.37□□□□□ -1.07
NIPBL-205ENST00000505998 MPZL3Q6UWV2 235 aa8.37□□□□□ -1.07
NIPBL-205ENST00000505998 RNPC3Q96LT9 517 aaKnown RBP8.37□□□□□ -1.07
NIPBL-205ENST00000505998 PDLIM7Q9NR12 457 aa8.37□□□□□ -1.07
NIPBL-205ENST00000505998 GULP1Q9UBP9 304 aa8.37□□□□□ -1.07
NIPBL-205ENST00000505998 TIMM13Q9Y5L4 95 aaPredicted RBP8.37□□□□□ -1.07
NIPBL-205ENST00000505998 NPFFR2Q9Y5X5 522 aa8.37□□□□□ -1.07
NIPBL-205ENST00000505998 NCAPD3P42695 1498 aa8.37□□□□□ -1.07
NIPBL-205ENST00000505998 MSL3P1P0C860 447 aa8.36□□□□□ -1.07
NIPBL-205ENST00000505998 RPL11P62913 178 aaKnown RBP8.36□□□□□ -1.07
NIPBL-205ENST00000505998 SQSTM1Q13501 440 aa8.36□□□□□ -1.07
NIPBL-205ENST00000505998 RCBTB1Q8NDN9 531 aa8.36□□□□□ -1.07
NIPBL-205ENST00000505998 KISS1RQ969F8 398 aaPredicted RBP8.36□□□□□ -1.07
NIPBL-205ENST00000505998 INTS4Q96HW7 963 aaKnown RBP8.36□□□□□ -1.07
NIPBL-205ENST00000505998 PHF20Q9BVI0 1012 aa8.36□□□□□ -1.07
NIPBL-205ENST00000505998 KANSL2Q9H9L4 492 aa8.36□□□□□ -1.07
NIPBL-205ENST00000505998 BTG4Q9NY30 223 aa8.36□□□□□ -1.07
NIPBL-205ENST00000505998 RWDD3Q9Y3V2 267 aa8.36□□□□□ -1.07
NIPBL-205ENST00000505998 MRPL42Q9Y6G3 142 aaKnown RBP8.36□□□□□ -1.07
NIPBL-205ENST00000505998 ATAD2BQ9ULI0 1458 aa8.36□□□□□ -1.07
NIPBL-205ENST00000505998 CARMIL2Q6F5E8 1435 aa8.36□□□□□ -1.07
NIPBL-205ENST00000505998 RSF1Q96T23 1441 aaPredicted RBP8.36□□□□□ -1.07
NIPBL-205ENST00000505998 LOC100996750A0A140TA64 210 aa8.35□□□□□ -1.07
NIPBL-205ENST00000505998 LCP1P13796 627 aa8.35□□□□□ -1.07
NIPBL-205ENST00000505998 TACR1P25103 407 aa8.35□□□□□ -1.07
NIPBL-205ENST00000505998 PDE6BP35913 854 aa8.35□□□□□ -1.07
NIPBL-205ENST00000505998 GTF2A2P52657 109 aa8.35□□□□□ -1.07
NIPBL-205ENST00000505998 ADGRF1Q5T601 910 aa8.35□□□□□ -1.07
NIPBL-205ENST00000505998 RSPO2Q6UXX9 243 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-205ENST00000505998 JAZF1Q86VZ6 243 aa8.35□□□□□ -1.07
NIPBL-205ENST00000505998 LZTR1Q8N653 840 aa8.35□□□□□ -1.07
NIPBL-205ENST00000505998 USP33Q8TEY7 942 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms