RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 PHF20Q9BVI0 1012 aa5.71□□□□□ -1.49
LMNB1-208ENST00000504788 TMEM121BQ9BXQ6 578 aaPredicted RBP5.71□□□□□ -1.49
LMNB1-208ENST00000504788 MAF1Q9H063 256 aa5.71□□□□□ -1.49
LMNB1-208ENST00000504788 MROH8Q9H579 483 aa5.71□□□□□ -1.49
LMNB1-208ENST00000504788 CYP39A1Q9NYL5 469 aa5.71□□□□□ -1.49
LMNB1-208ENST00000504788 RBM19Q9Y4C8 960 aaKnown RBP5.71□□□□□ -1.49
LMNB1-208ENST00000504788 PCDHA1Q9Y5I3 950 aa5.71□□□□□ -1.49
LMNB1-208ENST00000504788 TCHHQ07283 1943 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 POTEFA5A3E0 1075 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 SOWAHBA6NEL2 793 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 hCG_1984214I3L0E3 225 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 ZBED4O75132 1171 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 RGS20O76081 388 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 SLC25A27O95847 323 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 EDNRBP24530 442 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 MNX1P50219 401 aaPredicted RBP5.71□□□□□ -1.5
LMNB1-208ENST00000504788 RPS6P62753 249 aaKnown RBP5.71□□□□□ -1.5
LMNB1-208ENST00000504788 ZNF792Q3KQV3 632 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 TKFCQ3LXA3 575 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 USH1GQ495M9 461 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 EARS2Q5JPH6 523 aaKnown RBP5.71□□□□□ -1.5
LMNB1-208ENST00000504788 PPP1R18Q6NYC8 613 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 SLC30A10Q6XR72 485 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 FAM177A1Q8N128 213 aaPredicted RBP5.71□□□□□ -1.5
LMNB1-208ENST00000504788 ZNF713Q8N859 430 aaPredicted RBP5.71□□□□□ -1.5
LMNB1-208ENST00000504788 DAGLBQ8NCG7 672 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 CHST13Q8NET6 341 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 FBXO18Q8NFZ0 1043 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 NPLOC4Q8TAT6 608 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 SYTL5Q8TDW5 730 aaPredicted RBP5.71□□□□□ -1.5
LMNB1-208ENST00000504788 RRP36Q96EU6 259 aaKnown RBP5.71□□□□□ -1.5
LMNB1-208ENST00000504788 TRERF1Q96PN7 1200 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 SLC26A6Q9BXS9 759 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 SH3GLB2Q9NR46 395 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 RNF146Q9NTX7 359 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 FLRT1Q9NZU1 646 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 VPS54Q9P1Q0 977 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 CCPG1Q9ULG6 757 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 GABRQQ9UN88 632 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 DDX49Q9Y6V7 483 aaKnown RBP5.71□□□□□ -1.5
LMNB1-208ENST00000504788 ABCB11O95342 1321 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 RPTORQ8N122 1335 aa5.71□□□□□ -1.5
LMNB1-208ENST00000504788 KIF28PB7ZC32 967 aa5.7□□□□□ -1.5
LMNB1-208ENST00000504788 WNT7AO00755 349 aa5.7□□□□□ -1.5
LMNB1-208ENST00000504788 STRNO43815 780 aa5.7□□□□□ -1.5
LMNB1-208ENST00000504788 DHX16O60231 1041 aaKnown RBP5.7□□□□□ -1.5
LMNB1-208ENST00000504788 XRCC5P13010 732 aaKnown RBP5.7□□□□□ -1.5
LMNB1-208ENST00000504788 ALAS1P13196 640 aa5.7□□□□□ -1.5
LMNB1-208ENST00000504788 MAPK4P31152 587 aa5.7□□□□□ -1.5
LMNB1-208ENST00000504788 PSMC4P43686 418 aa5.7□□□□□ -1.5
LMNB1-208ENST00000504788 CNTN2Q02246 1040 aa5.7□□□□□ -1.5
LMNB1-208ENST00000504788 PKP1Q13835 747 aa5.7□□□□□ -1.5
LMNB1-208ENST00000504788 USP17L6PQ6QN14 398 aa5.7□□□□□ -1.5
LMNB1-208ENST00000504788 MAMDC4Q6UXC1 1216 aa5.7□□□□□ -1.5
LMNB1-208ENST00000504788 OTOP1Q7RTM1 612 aa5.7□□□□□ -1.5
LMNB1-208ENST00000504788 TEX2Q8IWB9 1127 aa5.7□□□□□ -1.5
LMNB1-208ENST00000504788 CD99L2Q8TCZ2 262 aa5.7□□□□□ -1.5
LMNB1-208ENST00000504788 OXER1Q8TDS5 423 aa5.7□□□□□ -1.5
LMNB1-208ENST00000504788 PIBF1Q8WXW3 757 aa5.7□□□□□ -1.5
LMNB1-208ENST00000504788 ACAD9Q9H845 621 aa5.7□□□□□ -1.5
LMNB1-208ENST00000504788 RIC8AQ9NPQ8 531 aa5.7□□□□□ -1.5
LMNB1-208ENST00000504788 RBM27Q9P2N5 1060 aaKnown RBP5.7□□□□□ -1.5
LMNB1-208ENST00000504788 ORC3Q9UBD5 711 aaPredicted RBP5.7□□□□□ -1.5
LMNB1-208ENST00000504788 ZDHHC9Q9Y397 364 aa5.7□□□□□ -1.5
LMNB1-208ENST00000504788 FAM205CA6NFA0 338 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 SLC15A5A6NIM6 579 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 FKTNO75072 461 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 CDKL5O76039 1030 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 MMP1P03956 469 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 U2AF2P26368 475 aaKnown RBP eCLIP5.69□□□□□ -1.5
LMNB1-208ENST00000504788 GJB2P29033 226 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 ADORA2AP29274 412 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 MRPS9P82933 396 aaKnown RBP5.69□□□□□ -1.5
LMNB1-208ENST00000504788 HMGN5P82970 282 aaKnown RBP5.69□□□□□ -1.5
LMNB1-208ENST00000504788 PRKCZQ05513 592 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 SSRP1Q08945 709 aaKnown RBP5.69□□□□□ -1.5
LMNB1-208ENST00000504788 IKQ13123 557 aaPredicted RBP5.69□□□□□ -1.5
LMNB1-208ENST00000504788 IRF5Q13568 498 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 BAATQ14032 418 aaPredicted RBP5.69□□□□□ -1.5
LMNB1-208ENST00000504788 CCL14Q16627 93 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 IER5LQ5T953 404 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 MAP3K21Q5TCX8 1036 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 KRT40Q6A162 431 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 PLEKHH3Q7Z736 793 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 SAMD3Q8N6K7 520 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 SLAIN1Q8ND83 568 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 IL31RAQ8NI17 732 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 LENG9Q96B70 501 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 DDX11Q96FC9 970 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 MAML3Q96JK9 1138 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 TAAR1Q96RJ0 339 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 HOMER2Q9NSB8 354 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 BMP2KQ9NSY1 1161 aaPredicted RBP5.69□□□□□ -1.5
LMNB1-208ENST00000504788 MAP3K20Q9NYL2 800 aaKnown RBP5.69□□□□□ -1.5
LMNB1-208ENST00000504788 SRRDQ9UH36 339 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 PNMA2Q9UL42 364 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 KCNJ14Q9UNX9 436 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 DIS3Q9Y2L1 958 aaKnown RBP5.69□□□□□ -1.5
LMNB1-208ENST00000504788 IGLV3-22A0A075B6J6 115 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 SMCO2A6NFE2 343 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms