RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 THAP11Q96EK4 314 aa10.84□□□□□ -0.67
DHFR-202ENST00000504396 SLC6A16Q9GZN6 736 aa10.84□□□□□ -0.67
DHFR-202ENST00000504396 PRDM12Q9H4Q4 367 aa10.84□□□□□ -0.67
DHFR-202ENST00000504396 MKNK2Q9HBH9 465 aa10.84□□□□□ -0.67
DHFR-202ENST00000504396 ARPP21Q9UBL0 812 aaPredicted RBP10.84□□□□□ -0.67
DHFR-202ENST00000504396 SYNGAP1Q96PV0 1343 aa10.83□□□□□ -0.68
DHFR-202ENST00000504396 GREB1LQ9C091 1923 aaPredicted RBP10.83□□□□□ -0.68
DHFR-202ENST00000504396 A0A0U1RQG5 324 aaPredicted RBP10.83□□□□□ -0.68
DHFR-202ENST00000504396 ZBED4O75132 1171 aa10.83□□□□□ -0.68
DHFR-202ENST00000504396 RAB11FIP3O75154 756 aa10.83□□□□□ -0.68
DHFR-202ENST00000504396 DUSP11O75319 330 aaKnown RBP10.83□□□□□ -0.68
DHFR-202ENST00000504396 SNAI1O95863 264 aaPredicted RBP10.83□□□□□ -0.68
DHFR-202ENST00000504396 CHGBP05060 677 aa10.83□□□□□ -0.68
DHFR-202ENST00000504396 ASGR1P07306 291 aa10.83□□□□□ -0.68
DHFR-202ENST00000504396 ACRP10323 421 aa10.83□□□□□ -0.68
DHFR-202ENST00000504396 CSF2RAP15509 400 aa10.83□□□□□ -0.68
DHFR-202ENST00000504396 CCDC85BQ15834 202 aaPredicted RBP10.83□□□□□ -0.68
DHFR-202ENST00000504396 MFSD5Q6N075 450 aa10.83□□□□□ -0.68
DHFR-202ENST00000504396 CTR9Q6PD62 1173 aa10.83□□□□□ -0.68
DHFR-202ENST00000504396 REPS2Q8NFH8 660 aa10.83□□□□□ -0.68
DHFR-202ENST00000504396 HLA-CQ95604 372 aa10.83□□□□□ -0.68
DHFR-202ENST00000504396 PBX4Q9BYU1 374 aa10.83□□□□□ -0.68
DHFR-202ENST00000504396 CHMP4BQ9H444 224 aaKnown RBP10.83□□□□□ -0.68
DHFR-202ENST00000504396 SLC24A3Q9HC58 644 aa10.83□□□□□ -0.68
DHFR-202ENST00000504396 RAVER2Q9HCJ3 691 aaKnown RBP10.83□□□□□ -0.68
DHFR-202ENST00000504396 HOMER2Q9NSB8 354 aa10.83□□□□□ -0.68
DHFR-202ENST00000504396 TBX21Q9UL17 535 aa10.83□□□□□ -0.68
DHFR-202ENST00000504396 RIPK3Q9Y572 518 aa10.83□□□□□ -0.68
DHFR-202ENST00000504396 ZBED9Q6R2W3 1325 aa10.82□□□□□ -0.68
DHFR-202ENST00000504396 MINDY4BA8MYZ0 360 aa10.82□□□□□ -0.68
DHFR-202ENST00000504396 NDUFB10O96000 172 aa10.82□□□□□ -0.68
DHFR-202ENST00000504396 ACVR2BQ13705 512 aa10.82□□□□□ -0.68
DHFR-202ENST00000504396 UBE3CQ15386 1083 aa10.82□□□□□ -0.68
DHFR-202ENST00000504396 GNASQ5JWF2 1037 aa10.82□□□□□ -0.68
DHFR-202ENST00000504396 ZSCAN25Q6NSZ9 544 aa10.82□□□□□ -0.68
DHFR-202ENST00000504396 PSRC1Q6PGN9 363 aaPredicted RBP10.82□□□□□ -0.68
DHFR-202ENST00000504396 MICALL1Q8N3F8 863 aa10.82□□□□□ -0.68
DHFR-202ENST00000504396 PRPF38AQ8NAV1 312 aaKnown RBP10.82□□□□□ -0.68
DHFR-202ENST00000504396 KLHDC9Q8NEP7 349 aa10.82□□□□□ -0.68
DHFR-202ENST00000504396 MTIF3Q9H2K0 278 aaKnown RBP10.82□□□□□ -0.68
DHFR-202ENST00000504396 THEGQ9P2T0 379 aa10.82□□□□□ -0.68
DHFR-202ENST00000504396 MSRAQ9UJ68 235 aa10.82□□□□□ -0.68
DHFR-202ENST00000504396 MYH4Q9Y623 1939 aa10.82□□□□□ -0.68
DHFR-202ENST00000504396 ELP1O95163 1332 aa10.81□□□□□ -0.68
DHFR-202ENST00000504396 F5H6K3 240 aa10.81□□□□□ -0.68
DHFR-202ENST00000504396 ARVCFO00192 962 aa10.81□□□□□ -0.68
DHFR-202ENST00000504396 ATP5JP18859 108 aa10.81□□□□□ -0.68
DHFR-202ENST00000504396 KLRC3Q07444 240 aa10.81□□□□□ -0.68
DHFR-202ENST00000504396 IKQ13123 557 aaPredicted RBP10.81□□□□□ -0.68
DHFR-202ENST00000504396 CCDC144BQ3MJ40 725 aa10.81□□□□□ -0.68
DHFR-202ENST00000504396 TMEM240Q5SV17 173 aa10.81□□□□□ -0.68
DHFR-202ENST00000504396 RNF19BQ6ZMZ0 732 aa10.81□□□□□ -0.68
DHFR-202ENST00000504396 ZNF365Q70YC5 407 aa10.81□□□□□ -0.68
DHFR-202ENST00000504396 ARMCX2Q7L311 632 aa10.81□□□□□ -0.68
DHFR-202ENST00000504396 PARP9Q8IXQ6 854 aa10.81□□□□□ -0.68
DHFR-202ENST00000504396 HAUS7Q99871 368 aa10.81□□□□□ -0.68
DHFR-202ENST00000504396 IRX2Q9BZI1 471 aaPredicted RBP10.81□□□□□ -0.68
DHFR-202ENST00000504396 ABHD16BQ9H3Z7 469 aa10.81□□□□□ -0.68
DHFR-202ENST00000504396 CLIP2Q9UDT6 1046 aa10.81□□□□□ -0.68
DHFR-202ENST00000504396 MCM3APO60318 1980 aa10.81□□□□□ -0.68
DHFR-202ENST00000504396 ADCY6O43306 1168 aa10.8□□□□□ -0.68
DHFR-202ENST00000504396 HOXA2O43364 376 aa10.8□□□□□ -0.68
DHFR-202ENST00000504396 CST5P28325 142 aaPredicted RBP10.8□□□□□ -0.68
DHFR-202ENST00000504396 CYP2C18P33260 490 aa10.8□□□□□ -0.68
DHFR-202ENST00000504396 TDO2P48775 406 aa10.8□□□□□ -0.68
DHFR-202ENST00000504396 BEX3Q00994 111 aa10.8□□□□□ -0.68
DHFR-202ENST00000504396 RAB30Q15771 203 aa10.8□□□□□ -0.68
DHFR-202ENST00000504396 CCSAPQ6IQ19 270 aaPredicted RBP10.8□□□□□ -0.68
DHFR-202ENST00000504396 MAMDC4Q6UXC1 1216 aa10.8□□□□□ -0.68
DHFR-202ENST00000504396 LRRC47Q8N1G4 583 aaKnown RBP10.8□□□□□ -0.68
DHFR-202ENST00000504396 ADAMTS19Q8TE59 1207 aa10.8□□□□□ -0.68
DHFR-202ENST00000504396 CHMP4CQ96CF2 233 aa10.8□□□□□ -0.68
DHFR-202ENST00000504396 PUS7LQ9H0K6 701 aaKnown RBP10.8□□□□□ -0.68
DHFR-202ENST00000504396 NKX2-4Q9H2Z4 354 aa10.8□□□□□ -0.68
DHFR-202ENST00000504396 SLC28A3Q9HAS3 691 aa10.8□□□□□ -0.68
DHFR-202ENST00000504396 FBXO40Q9UH90 709 aa10.8□□□□□ -0.68
DHFR-202ENST00000504396 DDX19BQ9UMR2 479 aa10.8□□□□□ -0.68
DHFR-202ENST00000504396 SYNPO2Q9UMS6 1093 aa10.8□□□□□ -0.68
DHFR-202ENST00000504396 GBF1Q92538 1859 aa10.79□□□□□ -0.68
DHFR-202ENST00000504396 DNAJC25-GNG10A0A024R161 153 aa10.79□□□□□ -0.68
DHFR-202ENST00000504396 ATP2A1O14983 1001 aa10.79□□□□□ -0.68
DHFR-202ENST00000504396 PRDM1O75626 825 aa10.79□□□□□ -0.68
DHFR-202ENST00000504396 APPP05067 770 aa10.79□□□□□ -0.68
DHFR-202ENST00000504396 RASA1P20936 1047 aa10.79□□□□□ -0.68
DHFR-202ENST00000504396 GJA9P57773 515 aa10.79□□□□□ -0.68
DHFR-202ENST00000504396 USP46P62068 366 aa10.79□□□□□ -0.68
DHFR-202ENST00000504396 GIMAP6Q6P9H5 292 aa10.79□□□□□ -0.68
DHFR-202ENST00000504396 BRICD5Q6PL45 260 aa10.79□□□□□ -0.68
DHFR-202ENST00000504396 C16orf59Q7L2K0 433 aa10.79□□□□□ -0.68
DHFR-202ENST00000504396 FAM126BQ8IXS8 530 aa10.79□□□□□ -0.68
DHFR-202ENST00000504396 CCDC144CPQ8IYA2 1237 aa10.79□□□□□ -0.68
DHFR-202ENST00000504396 ZNF444Q8N0Y2 327 aaPredicted RBP10.79□□□□□ -0.68
DHFR-202ENST00000504396 ATXN2LQ8WWM7 1075 aaKnown RBP10.79□□□□□ -0.68
DHFR-202ENST00000504396 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.79□□□□□ -0.689e-11■■□□□ 14.2
DHFR-202ENST00000504396 HIPK3Q9H422 1215 aa10.79□□□□□ -0.68
DHFR-202ENST00000504396 NYAP2Q9P242 653 aa10.79□□□□□ -0.68
DHFR-202ENST00000504396 FEM1BQ9UK73 627 aa10.79□□□□□ -0.68
DHFR-202ENST00000504396 COG6Q9Y2V7 657 aa10.79□□□□□ -0.68
DHFR-202ENST00000504396 SPTBN5Q9NRC6 3674 aaKnown RBP10.78□□□□□ -0.68
DHFR-202ENST00000504396 ZBBXA8MT70 800 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms