RNA–Protein interactions for RNA: ENST00000504331.1

OTUD4-204, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 591 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-204ENST00000504331 MAST3O60307 1309 aa6.34□□□□□ -1.39
OTUD4-204ENST00000504331 ADGRA2Q96PE1 1338 aa6.34□□□□□ -1.39
OTUD4-204ENST00000504331 TFRCP02786 760 aaKnown RBP6.34□□□□□ -1.39
OTUD4-204ENST00000504331 SKIP12755 728 aa6.34□□□□□ -1.39
OTUD4-204ENST00000504331 RBM5P52756 815 aaKnown RBP eCLIP6.34□□□□□ -1.39
OTUD4-204ENST00000504331 SEMA3FQ13275 785 aa6.34□□□□□ -1.39
OTUD4-204ENST00000504331 KSR2Q6VAB6 950 aa6.34□□□□□ -1.39
OTUD4-204ENST00000504331 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.34□□□□□ -1.39
OTUD4-204ENST00000504331 VSIG10LQ86VR7 867 aa6.34□□□□□ -1.39
OTUD4-204ENST00000504331 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.34□□□□□ -1.39
OTUD4-204ENST00000504331 TP53INP2Q8IXH6 220 aa6.34□□□□□ -1.39
OTUD4-204ENST00000504331 SH3TC2Q8TF17 1288 aa6.34□□□□□ -1.39
OTUD4-204ENST00000504331 PBXIP1Q96AQ6 731 aa6.34□□□□□ -1.39
OTUD4-204ENST00000504331 CLMNQ96JQ2 1002 aa6.34□□□□□ -1.39
OTUD4-204ENST00000504331 PRMT6Q96LA8 375 aaPredicted RBP6.34□□□□□ -1.39
OTUD4-204ENST00000504331 MFSD14AQ96MC6 490 aa6.34□□□□□ -1.39
OTUD4-204ENST00000504331 C2orf49Q9BVC5 232 aaPredicted RBP6.34□□□□□ -1.39
OTUD4-204ENST00000504331 MYH16Q9H6N6 1097 aa6.34□□□□□ -1.39
OTUD4-204ENST00000504331 VEZTQ9HBM0 779 aa6.34□□□□□ -1.39
OTUD4-204ENST00000504331 CUL9Q8IWT3 2517 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 NCANO14594 1321 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 MYPNQ86TC9 1320 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 RBM47A0AV96 593 aaKnown RBP6.33□□□□□ -1.4
OTUD4-204ENST00000504331 ANKRD18BA2A2Z9 1011 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 BTBD19C9JJ37 291 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 ANXA1P04083 346 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 CSF1RP07333 972 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 BMP3P12645 472 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 FOSL1P15407 271 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 EPB42P16452 691 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 IDH3AP50213 366 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 GNAI1P63096 354 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 UBE4AQ14139 1066 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 RALBP1Q15311 655 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 DUSP27Q5VZP5 1158 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 FAM43AQ8N2R8 423 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 COA7Q96BR5 231 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 SHISA4Q96DD7 197 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 ELP3Q9H9T3 547 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 PRM3Q9NNZ6 103 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 PAK6Q9NQU5 681 aaPredicted RBP6.33□□□□□ -1.4
OTUD4-204ENST00000504331 TLR7Q9NYK1 1049 aaKnown RBP6.33□□□□□ -1.4
OTUD4-204ENST00000504331 IVNS1ABPQ9Y6Y0 642 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 MYH3P11055 1940 aa6.33□□□□□ -1.4
OTUD4-204ENST00000504331 TMEM265A0A087WTH1 108 aa6.32□□□□□ -1.4
OTUD4-204ENST00000504331 ADCY3O60266 1144 aa6.32□□□□□ -1.4
OTUD4-204ENST00000504331 LZTS3O60299 673 aaPredicted RBP6.32□□□□□ -1.4
OTUD4-204ENST00000504331 CD68P34810 354 aaPredicted RBP6.32□□□□□ -1.4
OTUD4-204ENST00000504331 PREPP48147 710 aa6.32□□□□□ -1.4
OTUD4-204ENST00000504331 VGLL4Q14135 290 aa6.32□□□□□ -1.4
OTUD4-204ENST00000504331 DEPDC4Q8N2C3 294 aa6.32□□□□□ -1.4
OTUD4-204ENST00000504331 STAG2Q8N3U4 1231 aa6.32□□□□□ -1.4
OTUD4-204ENST00000504331 TSEN2Q8NCE0 465 aaKnown RBP6.32□□□□□ -1.4
OTUD4-204ENST00000504331 RUNDC1Q96C34 613 aa6.32□□□□□ -1.4
OTUD4-204ENST00000504331 MYD88Q99836 296 aa6.32□□□□□ -1.4
OTUD4-204ENST00000504331 ZNF341Q9BYN7 854 aa6.32□□□□□ -1.4
OTUD4-204ENST00000504331 KCNF1Q9H3M0 494 aa6.32□□□□□ -1.4
OTUD4-204ENST00000504331 ZNF70Q9UC06 446 aaPredicted RBP6.32□□□□□ -1.4
OTUD4-204ENST00000504331 STAP2Q9UGK3 403 aa6.32□□□□□ -1.4
OTUD4-204ENST00000504331 RPAP1Q9BWH6 1393 aaPredicted RBP6.31□□□□□ -1.4
OTUD4-204ENST00000504331 RPTORQ8N122 1335 aa6.31□□□□□ -1.4
OTUD4-204ENST00000504331 PDHXO00330 501 aa6.31□□□□□ -1.4
OTUD4-204ENST00000504331 F13BP05160 661 aa6.31□□□□□ -1.4
OTUD4-204ENST00000504331 ERCC3P19447 782 aa6.31□□□□□ -1.4
OTUD4-204ENST00000504331 CHRNDQ07001 517 aa6.31□□□□□ -1.4
OTUD4-204ENST00000504331 PABPC4Q13310 644 aaKnown RBP eCLIP6.31□□□□□ -1.4
OTUD4-204ENST00000504331 IFIT5Q13325 482 aaKnown RBP6.31□□□□□ -1.4
OTUD4-204ENST00000504331 RTN1Q16799 776 aa6.31□□□□□ -1.4
OTUD4-204ENST00000504331 NOL9Q5SY16 702 aaKnown RBP6.31□□□□□ -1.4
OTUD4-204ENST00000504331 CCDC102BQ68D86 513 aa6.31□□□□□ -1.4
OTUD4-204ENST00000504331 TXNDC11Q6PKC3 985 aa6.31□□□□□ -1.4
OTUD4-204ENST00000504331 HHIPL2Q6UWX4 724 aa6.31□□□□□ -1.4
OTUD4-204ENST00000504331 TDRD7Q8NHU6 1098 aaKnown RBP6.31□□□□□ -1.4
OTUD4-204ENST00000504331 DRC1Q96MC2 740 aa6.31□□□□□ -1.4
OTUD4-204ENST00000504331 TEPSINQ96N21 525 aa6.31□□□□□ -1.4
OTUD4-204ENST00000504331 NSUN5Q96P11 429 aaKnown RBP6.31□□□□□ -1.4
OTUD4-204ENST00000504331 STK31Q9BXU1 1019 aa6.31□□□□□ -1.4
OTUD4-204ENST00000504331 GREM2Q9H772 168 aa6.31□□□□□ -1.4
OTUD4-204ENST00000504331 IGSF5Q9NSI5 407 aa6.31□□□□□ -1.4
OTUD4-204ENST00000504331 IFT57Q9NWB7 429 aa6.31□□□□□ -1.4
OTUD4-204ENST00000504331 ZNF112Q9UJU3 913 aa6.31□□□□□ -1.4
OTUD4-204ENST00000504331 TTF2Q9UNY4 1162 aaKnown RBP6.31□□□□□ -1.4
OTUD4-204ENST00000504331 PPME1Q9Y570 386 aa6.31□□□□□ -1.4
OTUD4-204ENST00000504331 CACNA1FO60840 1977 aa6.3□□□□□ -1.4
OTUD4-204ENST00000504331 CLRN2A0PK11 232 aa6.3□□□□□ -1.4
OTUD4-204ENST00000504331 LINC01387J3KSC0 135 aa6.3□□□□□ -1.4
OTUD4-204ENST00000504331 M0R2N6 131 aa6.3□□□□□ -1.4
OTUD4-204ENST00000504331 PRRG2O14669 202 aa6.3□□□□□ -1.4
OTUD4-204ENST00000504331 HIBADHP31937 336 aaKnown RBP6.3□□□□□ -1.4
OTUD4-204ENST00000504331 GCLCP48506 637 aaPredicted RBP6.3□□□□□ -1.4
OTUD4-204ENST00000504331 CLDN10P78369 228 aa6.3□□□□□ -1.4
OTUD4-204ENST00000504331 MFSD14BQ5SR56 506 aa6.3□□□□□ -1.4
OTUD4-204ENST00000504331 B4GALNT3Q6L9W6 998 aa6.3□□□□□ -1.4
OTUD4-204ENST00000504331 DHX37Q8IY37 1157 aaKnown RBP6.3□□□□□ -1.4
OTUD4-204ENST00000504331 SHISA5Q8N114 240 aa6.3□□□□□ -1.4
OTUD4-204ENST00000504331 UBASH3BQ8TF42 649 aa6.3□□□□□ -1.4
OTUD4-204ENST00000504331 TEKT1Q969V4 418 aa6.3□□□□□ -1.4
OTUD4-204ENST00000504331 ZDHHC15Q96MV8 337 aa6.3□□□□□ -1.4
OTUD4-204ENST00000504331 WRNIP1Q96S55 665 aa6.3□□□□□ -1.4
OTUD4-204ENST00000504331 SCAF8Q9UPN6 1271 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms