RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 HPXP02790 462 aa7.01□□□□□ -1.29
TRAPPC13-205ENST00000504243 GABREP78334 506 aa7.01□□□□□ -1.29
TRAPPC13-205ENST00000504243 CHRNEQ04844 493 aa7.01□□□□□ -1.29
TRAPPC13-205ENST00000504243 PTPROQ16827 1216 aa7.01□□□□□ -1.29
TRAPPC13-205ENST00000504243 CNNM4Q6P4Q7 775 aa7.01□□□□□ -1.29
TRAPPC13-205ENST00000504243 ANKS4BQ8N8V4 417 aa7.01□□□□□ -1.29
TRAPPC13-205ENST00000504243 ZCRB1Q8TBF4 217 aaKnown RBP7.01□□□□□ -1.29
TRAPPC13-205ENST00000504243 NINJ1Q92982 152 aa7.01□□□□□ -1.29
TRAPPC13-205ENST00000504243 KIRREL1Q96J84 757 aa7.01□□□□□ -1.29
TRAPPC13-205ENST00000504243 MRPL4Q9BYD3 311 aaKnown RBP7.01□□□□□ -1.29
TRAPPC13-205ENST00000504243 ZNF205O95201 554 aa7□□□□□ -1.29
TRAPPC13-205ENST00000504243 MYCLP1P12525 358 aaPredicted RBP7□□□□□ -1.29
TRAPPC13-205ENST00000504243 PLS3P13797 630 aa7□□□□□ -1.29
TRAPPC13-205ENST00000504243 CNGA1P29973 690 aa7□□□□□ -1.29
TRAPPC13-205ENST00000504243 KCNMB1Q16558 191 aa7□□□□□ -1.29
TRAPPC13-205ENST00000504243 FNDC3BQ53EP0 1204 aaKnown RBP7□□□□□ -1.29
TRAPPC13-205ENST00000504243 EEF1DP3Q658K8 133 aa7□□□□□ -1.29
TRAPPC13-205ENST00000504243 ZSWIM9Q86XI8 627 aa7□□□□□ -1.29
TRAPPC13-205ENST00000504243 LILRA2Q8N149 483 aa7□□□□□ -1.29
TRAPPC13-205ENST00000504243 LINC01599Q8WXQ3 324 aa7□□□□□ -1.29
TRAPPC13-205ENST00000504243 MYLIPQ8WY64 445 aa7□□□□□ -1.29
TRAPPC13-205ENST00000504243 FAM168AQ92567 244 aa7□□□□□ -1.29
TRAPPC13-205ENST00000504243 PTPRN2Q92932 1015 aa7□□□□□ -1.29
TRAPPC13-205ENST00000504243 MFSD3Q96ES6 412 aa7□□□□□ -1.29
TRAPPC13-205ENST00000504243 CLUHP3Q96NS8 147 aa7□□□□□ -1.29
TRAPPC13-205ENST00000504243 TRAF6Q9Y4K3 522 aa7□□□□□ -1.29
TRAPPC13-205ENST00000504243 hCG_2014768A0A024R1R8 64 aa6.99□□□□□ -1.29
TRAPPC13-205ENST00000504243 NPHP3-ACAD11A0A0J9YXS1 232 aa6.99□□□□□ -1.29
TRAPPC13-205ENST00000504243 EFCAB14O75071 495 aa6.99□□□□□ -1.29
TRAPPC13-205ENST00000504243 CAPNS1P04632 268 aa6.99□□□□□ -1.29
TRAPPC13-205ENST00000504243 SCG5P05408 212 aa6.99□□□□□ -1.29
TRAPPC13-205ENST00000504243 HSP90B1P14625 803 aaKnown RBP6.99□□□□□ -1.29
TRAPPC13-205ENST00000504243 PAMP19021 973 aa6.99□□□□□ -1.29
TRAPPC13-205ENST00000504243 KIR2DL1P43626 348 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC13-205ENST00000504243 KIR2DL2P43627 348 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC13-205ENST00000504243 MASP1P48740 699 aa6.99□□□□□ -1.29
TRAPPC13-205ENST00000504243 LAPTM5Q13571 262 aa6.99□□□□□ -1.29
TRAPPC13-205ENST00000504243 NR0B2Q15466 257 aa6.99□□□□□ -1.29
TRAPPC13-205ENST00000504243 ZPBP2Q6X784 338 aa6.99□□□□□ -1.29
TRAPPC13-205ENST00000504243 ANKRD13AQ8IZ07 590 aa6.99□□□□□ -1.29
TRAPPC13-205ENST00000504243 ABHD4Q8TB40 342 aa6.99□□□□□ -1.29
TRAPPC13-205ENST00000504243 DCAF4Q8WV16 495 aa6.99□□□□□ -1.29
TRAPPC13-205ENST00000504243 DIO2Q92813 273 aa6.99□□□□□ -1.29
TRAPPC13-205ENST00000504243 COPS5Q92905 334 aa6.99□□□□□ -1.29
TRAPPC13-205ENST00000504243 FCRL2Q96LA5 508 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC13-205ENST00000504243 SLC52A2Q9HAB3 445 aa6.99□□□□□ -1.29
TRAPPC13-205ENST00000504243 TMEM82A0PJX8 343 aa6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 RFPL3O75679 317 aa6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 TBC1D8O95759 1140 aa6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 GLI1P08151 1106 aa6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 NTRK3Q16288 839 aa6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 CT47A1Q5JQC4 288 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 RTP2Q5QGT7 225 aa6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 SLC35F1Q5T1Q4 408 aa6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 RCSD1Q6JBY9 416 aa6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 KCNT2Q6UVM3 1135 aa6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 MAMDC2Q7Z304 686 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 BRAPQ7Z569 592 aa6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 MTDHQ86UE4 582 aaKnown RBP6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 CPNE8Q86YQ8 564 aa6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 SLC7A14Q8TBB6 771 aa6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 FRS2Q8WU20 508 aa6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 MAP6Q96JE9 813 aa6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 CHAMP1Q96JM3 812 aa6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 MAGEB10Q96LZ2 347 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 PHF20Q9BVI0 1012 aa6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 FAM53CQ9NYF3 392 aa6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 TNFRSF10DQ9UBN6 386 aa6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 COL4A3BPQ9Y5P4 624 aa6.98□□□□□ -1.29
TRAPPC13-205ENST00000504243 TRBV23OR9-2A0A075B6M9 112 aa6.97□□□□□ -1.29
TRAPPC13-205ENST00000504243 AQP7O14520 342 aa6.97□□□□□ -1.29
TRAPPC13-205ENST00000504243 OPA1O60313 960 aa6.97□□□□□ -1.29
TRAPPC13-205ENST00000504243 C6orf222P0C671 652 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC13-205ENST00000504243 ANAPC15P60006 121 aa6.97□□□□□ -1.29
TRAPPC13-205ENST00000504243 ERVFC1P60507 584 aa6.97□□□□□ -1.29
TRAPPC13-205ENST00000504243 IGBP1P78318 339 aa6.97□□□□□ -1.29
TRAPPC13-205ENST00000504243 SNX17Q15036 470 aa6.97□□□□□ -1.29
TRAPPC13-205ENST00000504243 FYB2Q5VWT5 728 aa6.97□□□□□ -1.29
TRAPPC13-205ENST00000504243 IQCEQ6IPM2 695 aa6.97□□□□□ -1.29
TRAPPC13-205ENST00000504243 DENND5AQ6IQ26 1287 aa6.97□□□□□ -1.29
TRAPPC13-205ENST00000504243 JAMLQ86YT9 394 aa6.97□□□□□ -1.29
TRAPPC13-205ENST00000504243 KREMEN2Q8NCW0 462 aa6.97□□□□□ -1.29
TRAPPC13-205ENST00000504243 NPLOC4Q8TAT6 608 aa6.97□□□□□ -1.29
TRAPPC13-205ENST00000504243 PTCHD1Q96NR3 888 aa6.97□□□□□ -1.29
TRAPPC13-205ENST00000504243 G6PC3Q9BUM1 346 aa6.97□□□□□ -1.29
TRAPPC13-205ENST00000504243 TMX1Q9H3N1 280 aa6.97□□□□□ -1.29
TRAPPC13-205ENST00000504243 TMEFF2Q9UIK5 374 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC13-205ENST00000504243 RNF114Q9Y508 228 aa6.97□□□□□ -1.29
TRAPPC13-205ENST00000504243 SDSP20132 328 aa6.96□□□□□ -1.3
TRAPPC13-205ENST00000504243 LTBRP36941 435 aa6.96□□□□□ -1.3
TRAPPC13-205ENST00000504243 NEK4P51957 841 aa6.96□□□□□ -1.3
TRAPPC13-205ENST00000504243 GUCY1A3Q02108 690 aa6.96□□□□□ -1.3
TRAPPC13-205ENST00000504243 CYP4F3Q08477 520 aa6.96□□□□□ -1.3
TRAPPC13-205ENST00000504243 KCNAB2Q13303 367 aa6.96□□□□□ -1.3
TRAPPC13-205ENST00000504243 SLC14A2Q15849 920 aa6.96□□□□□ -1.3
TRAPPC13-205ENST00000504243 TM4SF20Q53R12 229 aa6.96□□□□□ -1.3
TRAPPC13-205ENST00000504243 E4F1Q66K89 784 aaPredicted RBP6.96□□□□□ -1.3
TRAPPC13-205ENST00000504243 STYK1Q6J9G0 422 aa6.96□□□□□ -1.3
TRAPPC13-205ENST00000504243 IFNL3Q8IZI9 196 aa6.96□□□□□ -1.3
TRAPPC13-205ENST00000504243 CHAC2Q8WUX2 184 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms