RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 STX3Q13277 289 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 PUM3Q15397 648 aaKnown RBP6.81□□□□□ -1.32
CLCN3-204ENST00000504131 FSCBQ5H9T9 825 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 MAP3K21Q5TCX8 1036 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 TMC5Q6UXY8 1006 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 ANKRD13CQ8N6S4 541 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 CNNM3Q8NE01 707 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 CATSPER2Q96P56 530 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 PSTPIP2Q9H939 334 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 GALNT8Q9NY28 637 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 TMEM98Q9Y2Y6 226 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 SPEF1Q9Y4P9 236 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 PLEKHH2Q8IVE3 1493 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 ARHGAP35Q9NRY4 1499 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 RUSC2Q8N2Y8 1516 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 AKR1B15C9JRZ8 316 aaPredicted RBP6.81□□□□□ -1.32
CLCN3-204ENST00000504131 HIP1O00291 1037 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 S100A6P06703 90 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 ENDOUP21128 410 aaKnown RBP6.81□□□□□ -1.32
CLCN3-204ENST00000504131 PLEKHG6Q3KR16 790 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 RAPH1Q70E73 1250 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 THEMISQ8N1K5 641 aaPredicted RBP6.81□□□□□ -1.32
CLCN3-204ENST00000504131 FBXO41Q8TF61 875 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 HSPH1Q92598 858 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 PRPF18Q99633 342 aaKnown RBP6.81□□□□□ -1.32
CLCN3-204ENST00000504131 TEX12Q9BXU0 123 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 ANO10Q9NW15 660 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 SLC5A4Q9NY91 659 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 THEGQ9P2T0 379 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 MYO1AQ9UBC5 1043 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 FAM169AQ9Y6X4 670 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 PI4K2BG5E9Z4 385 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 CASQ2O14958 399 aaPredicted RBP6.81□□□□□ -1.32
CLCN3-204ENST00000504131 ZW10O43264 779 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 PRMT3O60678 531 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 CCDC192P0DO97 292 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 IFNA8P32881 189 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 VCPP55072 806 aaKnown RBP6.81□□□□□ -1.32
CLCN3-204ENST00000504131 UBXN2AP68543 259 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 RABL6Q3YEC7 729 aaPredicted RBP6.81□□□□□ -1.32
CLCN3-204ENST00000504131 TMEM53Q6P2H8 277 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 KLC3Q6P597 504 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 HS2ST1Q7LGA3 356 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 ZNF710Q8N1W2 664 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 PI4K2BQ8TCG2 481 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 INPP5DQ92835 1189 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 CNPY3Q9BT09 278 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 SH3GLB2Q9NR46 395 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 SENP1Q9P0U3 644 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 KIAA1522Q9P206 1035 aaPredicted RBP6.81□□□□□ -1.32
CLCN3-204ENST00000504131 PFDN2Q9UHV9 154 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 USP16Q9Y5T5 823 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 ZC3H4Q9UPT8 1303 aaKnown RBP6.81□□□□□ -1.32
CLCN3-204ENST00000504131 SGSM2O43147 1006 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 ANXA13P27216 316 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 PPP1R2P41236 205 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 TBC1D8BQ0IIM8 1120 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 PDAP1Q13442 181 aaKnown RBP6.81□□□□□ -1.32
CLCN3-204ENST00000504131 CCDC102BQ68D86 513 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 PPP1R2P3Q6NXS1 205 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 BCAS4Q8TDM0 211 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.81□□□□□ -1.32
CLCN3-204ENST00000504131 DDX56Q9NY93 547 aaKnown RBP6.81□□□□□ -1.32
CLCN3-204ENST00000504131 SEC63Q9UGP8 760 aaKnown RBP6.81□□□□□ -1.32
CLCN3-204ENST00000504131 TPCN1Q9ULQ1 816 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 TRIM75PA6NK02 468 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 HNF1BP35680 557 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 CASP2P42575 452 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 PDE4DQ08499 809 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 NUGGCQ68CJ6 796 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 IRGCQ6NXR0 463 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 KSR1Q8IVT5 923 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 TCAIMQ8N3R3 496 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 PJA1Q8NG27 643 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 MTMR8Q96EF0 704 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 ATP6V1G3Q96LB4 118 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 SERHL2Q9H4I8 314 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 ZRANB1Q9UGI0 708 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 EIF4E1BA6NMX2 242 aaKnown RBP6.8□□□□□ -1.32
CLCN3-204ENST00000504131 GCLCP48506 637 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-204ENST00000504131 LRP8Q14114 963 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 IYDQ6PHW0 289 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 BRSK1Q8TDC3 778 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 UTP15Q8TED0 518 aaKnown RBP6.8□□□□□ -1.32
CLCN3-204ENST00000504131 HIC2Q96JB3 615 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 RAD21L1Q9H4I0 556 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 TLK1Q9UKI8 766 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 AP1M2Q9Y6Q5 423 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 CFAP43Q8NDM7 1665 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 TMEM110-MUSTN1A8MSY1 372 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 LMNAP02545 664 aaKnown RBP6.8□□□□□ -1.32
CLCN3-204ENST00000504131 CDC25CP30307 473 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 EIF2B2P49770 351 aaKnown RBP6.8□□□□□ -1.32
CLCN3-204ENST00000504131 SULT1E1P49888 294 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 CYLC2Q14093 348 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-204ENST00000504131 TRIM25Q14258 630 aaKnown RBP6.8□□□□□ -1.32
CLCN3-204ENST00000504131 CLUL1Q15846 466 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 SLC5A9Q2M3M2 681 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 Q3C1V9 767 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 PPP1R42Q7Z4L9 355 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms