RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 C9orf50Q5SZB4 431 aa25.76■■□□□ 1.71
LSM6-203ENST00000503982 ANKRD33Q7Z3H0 272 aa25.76■■□□□ 1.71
LSM6-203ENST00000503982 CLEC4DQ8WXI8 215 aa25.76■■□□□ 1.71
LSM6-203ENST00000503982 GNEQ9Y223 722 aaKnown RBP25.76■■□□□ 1.71
LSM6-203ENST00000503982 B4DLN1 442 aa25.75■■□□□ 1.71
LSM6-203ENST00000503982 ARVCFO00192 962 aa25.75■■□□□ 1.71
LSM6-203ENST00000503982 KIAA0355O15063 1070 aa25.75■■□□□ 1.71
LSM6-203ENST00000503982 PTGS1P23219 599 aa25.75■■□□□ 1.71
LSM6-203ENST00000503982 CHMLP26374 656 aa25.75■■□□□ 1.71
LSM6-203ENST00000503982 MRPL12P52815 198 aaKnown RBP25.75■■□□□ 1.71
LSM6-203ENST00000503982 RPS6P62753 249 aaKnown RBP25.75■■□□□ 1.71
LSM6-203ENST00000503982 TAPT1Q6NXT6 567 aa25.75■■□□□ 1.71
LSM6-203ENST00000503982 CXCL17Q6UXB2 119 aa25.75■■□□□ 1.71
LSM6-203ENST00000503982 ADGRF4Q8IZF3 695 aa25.75■■□□□ 1.71
LSM6-203ENST00000503982 LAMA3Q16787 3333 aa25.74■■□□□ 1.71
LSM6-203ENST00000503982 NEFLP07196 543 aa25.74■■□□□ 1.71
LSM6-203ENST00000503982 FPGSQ05932 587 aa25.74■■□□□ 1.71
LSM6-203ENST00000503982 ANKS1AQ92625 1134 aa25.74■■□□□ 1.71
LSM6-203ENST00000503982 WDR11Q9BZH6 1224 aa25.74■■□□□ 1.71
LSM6-203ENST00000503982 U3KPZ7 1027 aaPredicted RBP25.74■■□□□ 1.71
LSM6-203ENST00000503982 ABCB11O95342 1321 aa25.73■■□□□ 1.71
LSM6-203ENST00000503982 ERICH2A1L162 156 aa25.73■■□□□ 1.71
LSM6-203ENST00000503982 CABYRO75952 493 aa25.73■■□□□ 1.71
LSM6-203ENST00000503982 ITGB8P26012 769 aa25.73■■□□□ 1.71
LSM6-203ENST00000503982 RALYLQ86SE5 291 aaKnown RBP25.73■■□□□ 1.71
LSM6-203ENST00000503982 LOC102724159A0A0B4J2E5 919 aa25.72■■□□□ 1.71
LSM6-203ENST00000503982 PTH1RQ03431 593 aa25.72■■□□□ 1.71
LSM6-203ENST00000503982 PWP2Q15269 919 aaKnown RBP25.72■■□□□ 1.71
LSM6-203ENST00000503982 CYB5R4Q7L1T6 521 aa25.72■■□□□ 1.71
LSM6-203ENST00000503982 MORC4Q8TE76 937 aa25.72■■□□□ 1.71
LSM6-203ENST00000503982 RNPC3Q96LT9 517 aaKnown RBP25.72■■□□□ 1.71
LSM6-203ENST00000503982 Q9Y3F1 56 aa25.72■■□□□ 1.71
LSM6-203ENST00000503982 CTAGE5O15320 804 aa25.71■■□□□ 1.71
LSM6-203ENST00000503982 TIMP1P01033 207 aa25.71■■□□□ 1.71
LSM6-203ENST00000503982 QRICH1Q2TAL8 776 aa25.71■■□□□ 1.71
LSM6-203ENST00000503982 TMEM63BQ5T3F8 832 aa25.71■■□□□ 1.71
LSM6-203ENST00000503982 FBXO11Q86XK2 927 aa25.71■■□□□ 1.71
LSM6-203ENST00000503982 DNERQ8NFT8 737 aa25.71■■□□□ 1.71
LSM6-203ENST00000503982 OR6J1Q8NGC5 347 aa25.71■■□□□ 1.71
LSM6-203ENST00000503982 FAM161BQ96MY7 647 aa25.71■■□□□ 1.71
LSM6-203ENST00000503982 PPP1R12CQ9BZL4 782 aa25.71■■□□□ 1.71
LSM6-203ENST00000503982 IFIT3O14879 490 aaKnown RBP25.7■■□□□ 1.7
LSM6-203ENST00000503982 CDK7P50613 346 aa25.7■■□□□ 1.7
LSM6-203ENST00000503982 ITGA7Q13683 1181 aa25.7■■□□□ 1.7
LSM6-203ENST00000503982 DUSP28Q4G0W2 176 aa25.7■■□□□ 1.7
LSM6-203ENST00000503982 ZNF697Q5TEC3 545 aa25.7■■□□□ 1.7
LSM6-203ENST00000503982 MCF2L2Q86YR7 1114 aa25.7■■□□□ 1.7
LSM6-203ENST00000503982 GPHNQ9NQX3 736 aaPredicted RBP25.7■■□□□ 1.7
LSM6-203ENST00000503982 MYL3P08590 195 aa25.69■■□□□ 1.7
LSM6-203ENST00000503982 CYP21A2P08686 494 aa25.69■■□□□ 1.7
LSM6-203ENST00000503982 NKX3-2P78367 333 aa25.69■■□□□ 1.7
LSM6-203ENST00000503982 SART3Q15020 963 aaKnown RBP25.69■■□□□ 1.7
LSM6-203ENST00000503982 PPP2R5BQ15173 497 aa25.69■■□□□ 1.7
LSM6-203ENST00000503982 BRDTQ58F21 947 aaPredicted RBP25.69■■□□□ 1.7
LSM6-203ENST00000503982 MTMR10Q9NXD2 777 aa25.69■■□□□ 1.7
LSM6-203ENST00000503982 MRPL11Q9Y3B7 192 aaKnown RBP25.69■■□□□ 1.7
LSM6-203ENST00000503982 CPT1AP50416 773 aa25.68■■□□□ 1.7
LSM6-203ENST00000503982 PSMC6P62333 389 aa25.68■■□□□ 1.7
LSM6-203ENST00000503982 FAM126BQ8IXS8 530 aa25.68■■□□□ 1.7
LSM6-203ENST00000503982 STAG2Q8N3U4 1231 aa25.68■■□□□ 1.7
LSM6-203ENST00000503982 NCOA7Q8NI08 942 aa25.68■■□□□ 1.7
LSM6-203ENST00000503982 JMJD4Q9H9V9 463 aa25.68■■□□□ 1.7
LSM6-203ENST00000503982 TBX21Q9UL17 535 aa25.68■■□□□ 1.7
LSM6-203ENST00000503982 KLRF2D3W0D1 207 aa25.67■■□□□ 1.7
LSM6-203ENST00000503982 SGSM2O43147 1006 aa25.67■■□□□ 1.7
LSM6-203ENST00000503982 EPHB4P54760 987 aa25.67■■□□□ 1.7
LSM6-203ENST00000503982 PPIGQ13427 754 aaKnown RBP eCLIP25.67■■□□□ 1.7
LSM6-203ENST00000503982 WTAPQ15007 396 aa25.67■■□□□ 1.7
LSM6-203ENST00000503982 SEC23AQ15436 765 aa25.67■■□□□ 1.7
LSM6-203ENST00000503982 TMEM199Q8N511 208 aa25.67■■□□□ 1.7
LSM6-203ENST00000503982 RGS22Q8NE09 1264 aa25.67■■□□□ 1.7
LSM6-203ENST00000503982 SCFD2Q8WU76 684 aa25.67■■□□□ 1.7
LSM6-203ENST00000503982 TBC1D5Q92609 795 aa25.67■■□□□ 1.7
LSM6-203ENST00000503982 POLR3EQ9NVU0 708 aa25.67■■□□□ 1.7
LSM6-203ENST00000503982 E7EWF7 191 aa25.66■■□□□ 1.7
LSM6-203ENST00000503982 CFBP00751 764 aa25.66■■□□□ 1.7
LSM6-203ENST00000503982 TXNP10599 105 aaKnown RBP25.66■■□□□ 1.7
LSM6-203ENST00000503982 MFSD5Q6N075 450 aa25.66■■□□□ 1.7
LSM6-203ENST00000503982 CHST3Q7LGC8 479 aa25.66■■□□□ 1.7
LSM6-203ENST00000503982 HOMER1Q86YM7 354 aa25.66■■□□□ 1.7
LSM6-203ENST00000503982 SLC17A8Q8NDX2 589 aa25.66■■□□□ 1.7
LSM6-203ENST00000503982 NKRFO15226 690 aaKnown RBP eCLIP25.65■■□□□ 1.7
LSM6-203ENST00000503982 TTLL4Q14679 1199 aa25.65■■□□□ 1.7
LSM6-203ENST00000503982 ARHGEF16Q5VV41 709 aa25.65■■□□□ 1.7
LSM6-203ENST00000503982 TAAR1Q96RJ0 339 aa25.65■■□□□ 1.7
LSM6-203ENST00000503982 AMNQ9BXJ7 453 aa25.65■■□□□ 1.7
LSM6-203ENST00000503982 RBM47A0AV96 593 aaKnown RBP25.64■■□□□ 1.7
LSM6-203ENST00000503982 CHMP4BP1P59074 171 aa25.64■■□□□ 1.7
LSM6-203ENST00000503982 SYTL5Q8TDW5 730 aaPredicted RBP25.64■■□□□ 1.7
LSM6-203ENST00000503982 NSUN6Q8TEA1 469 aaKnown RBP25.64■■□□□ 1.7
LSM6-203ENST00000503982 COPS5Q92905 334 aa25.64■■□□□ 1.7
LSM6-203ENST00000503982 RMDN3Q96TC7 470 aa25.64■■□□□ 1.7
LSM6-203ENST00000503982 SEZ6LQ9BYH1 1024 aa25.64■■□□□ 1.7
LSM6-203ENST00000503982 MAD2L2Q9UI95 211 aa25.64■■□□□ 1.7
LSM6-203ENST00000503982 KIAA1217Q5T5P2 1943 aa25.64■■□□□ 1.69
LSM6-203ENST00000503982 BAZ2BQ9UIF8 2168 aaKnown RBP25.63■■□□□ 1.69
LSM6-203ENST00000503982 EIF2AK2P19525 551 aaKnown RBP25.63■■□□□ 1.69
LSM6-203ENST00000503982 EDNRBP24530 442 aa25.63■■□□□ 1.69
LSM6-203ENST00000503982 CYP2C18P33260 490 aa25.63■■□□□ 1.69
LSM6-203ENST00000503982 FAM47CQ5HY64 1035 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms