RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 MCM2P49736 904 aa12.84□□□□□ -0.35
VCAN-205ENST00000503923 UBXN2AP68543 259 aa12.84□□□□□ -0.35
VCAN-205ENST00000503923 GHRHRQ02643 423 aa12.84□□□□□ -0.35
VCAN-205ENST00000503923 SSRP1Q08945 709 aaKnown RBP12.84□□□□□ -0.35
VCAN-205ENST00000503923 PFKFB3Q16875 520 aaPredicted RBP12.84□□□□□ -0.35
VCAN-205ENST00000503923 MFSD14CQ5VZR4 134 aa12.84□□□□□ -0.35
VCAN-205ENST00000503923 SLC30A10Q6XR72 485 aa12.84□□□□□ -0.35
VCAN-205ENST00000503923 ZNF467Q7Z7K2 595 aaPredicted RBP12.84□□□□□ -0.35
VCAN-205ENST00000503923 MSL3Q8N5Y2 521 aaKnown RBP12.84□□□□□ -0.35
VCAN-205ENST00000503923 PHKBQ93100 1093 aa12.84□□□□□ -0.35
VCAN-205ENST00000503923 SH2B1Q9NRF2 756 aaPredicted RBP12.84□□□□□ -0.35
VCAN-205ENST00000503923 FLRT1Q9NZU1 646 aa12.84□□□□□ -0.35
VCAN-205ENST00000503923 GCOM1H8Y6P7 765 aaPredicted RBP12.83□□□□□ -0.36
VCAN-205ENST00000503923 OPLAHO14841 1288 aa12.83□□□□□ -0.36
VCAN-205ENST00000503923 CFBP00751 764 aa12.83□□□□□ -0.36
VCAN-205ENST00000503923 IGHA2P01877 340 aa12.83□□□□□ -0.36
VCAN-205ENST00000503923 POLR2MP0CAP2 368 aa12.83□□□□□ -0.36
VCAN-205ENST00000503923 SCG2P13521 617 aa12.83□□□□□ -0.36
VCAN-205ENST00000503923 HSD17B4P51659 736 aa12.83□□□□□ -0.36
VCAN-205ENST00000503923 CNTN2Q02246 1040 aa12.83□□□□□ -0.36
VCAN-205ENST00000503923 WWC2Q6AWC2 1192 aa12.83□□□□□ -0.36
VCAN-205ENST00000503923 PPP1R18Q6NYC8 613 aa12.83□□□□□ -0.36
VCAN-205ENST00000503923 NECAB1Q8N987 351 aa12.83□□□□□ -0.36
VCAN-205ENST00000503923 TBC1D5Q92609 795 aa12.83□□□□□ -0.36
VCAN-205ENST00000503923 GPKOWQ92917 476 aaPredicted RBP eCLIP12.83□□□□□ -0.36
VCAN-205ENST00000503923 ZNF333Q96JL9 665 aa12.83□□□□□ -0.36
VCAN-205ENST00000503923 TINF2Q9BSI4 451 aa12.83□□□□□ -0.36
VCAN-205ENST00000503923 BARHL2Q9NY43 387 aa12.83□□□□□ -0.36
VCAN-205ENST00000503923 ADD3Q9UEY8 706 aaKnown RBP12.83□□□□□ -0.36
VCAN-205ENST00000503923 LOC102724159A0A0B4J2E5 919 aa12.82□□□□□ -0.36
VCAN-205ENST00000503923 SOWAHBA6NEL2 793 aa12.82□□□□□ -0.36
VCAN-205ENST00000503923 ASB14A6NK59 587 aa12.82□□□□□ -0.36
VCAN-205ENST00000503923 STXBP3O00186 592 aa12.82□□□□□ -0.36
VCAN-205ENST00000503923 PPFIA3O75145 1194 aa12.82□□□□□ -0.36
VCAN-205ENST00000503923 DEXIO95424 95 aa12.82□□□□□ -0.36
VCAN-205ENST00000503923 NAPAP54920 295 aa12.82□□□□□ -0.36
VCAN-205ENST00000503923 PWP2Q15269 919 aaKnown RBP12.82□□□□□ -0.36
VCAN-205ENST00000503923 PKN1Q16512 942 aa12.82□□□□□ -0.36
VCAN-205ENST00000503923 MAMDC4Q6UXC1 1216 aa12.82□□□□□ -0.36
VCAN-205ENST00000503923 DNERQ8NFT8 737 aa12.82□□□□□ -0.36
VCAN-205ENST00000503923 SYTL5Q8TDW5 730 aaPredicted RBP12.82□□□□□ -0.36
VCAN-205ENST00000503923 CCDC12Q8WUD4 166 aaPredicted RBP12.82□□□□□ -0.36
VCAN-205ENST00000503923 CUL5Q93034 780 aa12.82□□□□□ -0.36
VCAN-205ENST00000503923 ABHD8Q96I13 439 aa12.82□□□□□ -0.36
VCAN-205ENST00000503923 FGD4Q96M96 766 aa12.82□□□□□ -0.36
VCAN-205ENST00000503923 MPHOSPH6Q99547 160 aaKnown RBP12.82□□□□□ -0.36
VCAN-205ENST00000503923 SYNGAP1Q96PV0 1343 aa12.82□□□□□ -0.36
VCAN-205ENST00000503923 STK36Q9NRP7 1315 aa12.82□□□□□ -0.36
VCAN-205ENST00000503923 LCTP09848 1927 aa12.82□□□□□ -0.36
VCAN-205ENST00000503923 B4DLN1 442 aa12.81□□□□□ -0.36
VCAN-205ENST00000503923 PIK3CDO00329 1044 aa12.81□□□□□ -0.36
VCAN-205ENST00000503923 CTDNEP1O95476 244 aa12.81□□□□□ -0.36
VCAN-205ENST00000503923 PRKAR2AP13861 404 aaKnown RBP12.81□□□□□ -0.36
VCAN-205ENST00000503923 CYP2C19P33261 490 aa12.81□□□□□ -0.36
VCAN-205ENST00000503923 ALDH5A1P51649 535 aaPredicted RBP12.81□□□□□ -0.36
VCAN-205ENST00000503923 MRPL12P52815 198 aaKnown RBP12.81□□□□□ -0.36
VCAN-205ENST00000503923 TRIM32Q13049 653 aa12.81□□□□□ -0.36
VCAN-205ENST00000503923 MAP3K21Q5TCX8 1036 aa12.81□□□□□ -0.36
VCAN-205ENST00000503923 TEX2Q8IWB9 1127 aa12.81□□□□□ -0.36
VCAN-205ENST00000503923 SMARCC2Q8TAQ2 1214 aa12.81□□□□□ -0.36
VCAN-205ENST00000503923 PURBQ96QR8 312 aaKnown RBP12.81□□□□□ -0.36
VCAN-205ENST00000503923 GLT8D2Q9H1C3 349 aa12.81□□□□□ -0.36
VCAN-205ENST00000503923 PSTPIP2Q9H939 334 aa12.81□□□□□ -0.36
VCAN-205ENST00000503923 NRBP1Q9UHY1 535 aa12.81□□□□□ -0.36
VCAN-205ENST00000503923 RPTORQ8N122 1335 aa12.81□□□□□ -0.36
VCAN-205ENST00000503923 SMCO2A6NFE2 343 aa12.8□□□□□ -0.36
VCAN-205ENST00000503923 CD2BP2O95400 341 aaKnown RBP12.8□□□□□ -0.36
VCAN-205ENST00000503923 HOXA13P31271 388 aaPredicted RBP12.8□□□□□ -0.36
VCAN-205ENST00000503923 CACNB2Q08289 660 aaPredicted RBP12.8□□□□□ -0.36
VCAN-205ENST00000503923 ST3GAL1Q11201 340 aa12.8□□□□□ -0.36
VCAN-205ENST00000503923 TYW1BQ6NUM6 668 aa12.8□□□□□ -0.36
VCAN-205ENST00000503923 ARMCX2Q7L311 632 aa12.8□□□□□ -0.36
VCAN-205ENST00000503923 CCDC83Q8IWF9 413 aa12.8□□□□□ -0.36
VCAN-205ENST00000503923 NSUN7Q8NE18 718 aaKnown RBP12.8□□□□□ -0.36
VCAN-205ENST00000503923 CCDC148Q8NFR7 591 aa12.8□□□□□ -0.36
VCAN-205ENST00000503923 NSUN6Q8TEA1 469 aaKnown RBP12.8□□□□□ -0.36
VCAN-205ENST00000503923 WASF1Q92558 559 aa12.8□□□□□ -0.36
VCAN-205ENST00000503923 TAAR1Q96RJ0 339 aa12.8□□□□□ -0.36
VCAN-205ENST00000503923 RMDN3Q96TC7 470 aa12.8□□□□□ -0.36
VCAN-205ENST00000503923 LLPHQ9BRT6 129 aaKnown RBP12.8□□□□□ -0.36
VCAN-205ENST00000503923 HMX1Q9NP08 348 aaPredicted RBP12.8□□□□□ -0.36
VCAN-205ENST00000503923 RIC8AQ9NPQ8 531 aa12.8□□□□□ -0.36
VCAN-205ENST00000503923 SH3GLB2Q9NR46 395 aa12.8□□□□□ -0.36
VCAN-205ENST00000503923 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.8□□□□□ -0.36
VCAN-205ENST00000503923 COL20A1Q9P218 1284 aa12.8□□□□□ -0.36
VCAN-205ENST00000503923 ORC3Q9UBD5 711 aaPredicted RBP12.8□□□□□ -0.36
VCAN-205ENST00000503923 CNPY2Q9Y2B0 182 aa12.8□□□□□ -0.36
VCAN-205ENST00000503923 ASTN1O14525 1302 aa12.8□□□□□ -0.36
VCAN-205ENST00000503923 ESYT2A0FGR8 921 aa12.79□□□□□ -0.36
VCAN-205ENST00000503923 MEIS2O14770 477 aa12.79□□□□□ -0.36
VCAN-205ENST00000503923 SNAI1O95863 264 aaPredicted RBP12.79□□□□□ -0.36
VCAN-205ENST00000503923 MYCP01106 439 aaPredicted RBP12.79□□□□□ -0.36
VCAN-205ENST00000503923 CYBAP13498 195 aa12.79□□□□□ -0.36
VCAN-205ENST00000503923 CCL5P13501 91 aa12.79□□□□□ -0.36
VCAN-205ENST00000503923 ADCY7P51828 1080 aa12.79□□□□□ -0.36
VCAN-205ENST00000503923 MTFR1Q15390 333 aa12.79□□□□□ -0.36
VCAN-205ENST00000503923 ARHGEF16Q5VV41 709 aa12.79□□□□□ -0.36
VCAN-205ENST00000503923 USP17L6PQ6QN14 398 aa12.79□□□□□ -0.36
VCAN-205ENST00000503923 FAM177A1Q8N128 213 aaPredicted RBP12.79□□□□□ -0.36
VCAN-205ENST00000503923 MORC4Q8TE76 937 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms