RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 ARMT1Q9H993 441 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 ARMCX3Q9UH62 379 aaPredicted RBP5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 AMFRQ9UKV5 643 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 NSFL1CQ9UNZ2 370 aaKnown RBP5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 KAT6BQ8WYB5 2073 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 GOLGA6CA6NDK9 693 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 GOLGA6BA6NDN3 693 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 CCDC169A6NNP5 214 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 KCNJ18B7U540 433 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 GOLGA6DP0CG33 693 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 PTPREP23469 700 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 KLHL30Q0D2K2 578 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 KCNJ12Q14500 433 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 FYB2Q5VWT5 728 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 SMYD5Q6GMV2 418 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 DPP8Q6V1X1 898 aaPredicted RBP5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 KIRREL3Q8IZU9 778 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 PLCD3Q8N3E9 789 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 WHAMMQ8TF30 809 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 TACO1Q9BSH4 297 aaKnown RBP5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 PFDN4Q9NQP4 134 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 GOLGA6AQ9NYA3 693 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 STIM2Q9P246 746 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 CTNND2Q9UQB3 1225 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 MORC2Q9Y6X9 1032 aaPredicted RBP5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 ZNF804BA4D1E1 1349 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 LOC102724428A0A0B4J2F2 783 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 GNPATO15228 680 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 ADAMTS2O95450 1211 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 RPN1P04843 607 aaKnown RBP5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 CYP21A2P08686 494 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 PHBP35232 272 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 SIK1P57059 783 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 TFAP4Q01664 338 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 LETM2Q2VYF4 491 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 SBK1Q52WX2 424 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 KRT39Q6A163 491 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 FAM196AQ6ZSG2 479 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 PIK3AP1Q6ZUJ8 805 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 OTUD7AQ8TE49 926 aaPredicted RBP5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 FAM20AQ96MK3 541 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 PANK2Q9BZ23 570 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 XPO4Q9C0E2 1151 aaKnown RBP5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 FAM96AQ9H5X1 160 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 MRGBPQ9NV56 204 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 PPP2R2CQ9Y2T4 447 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 SMCO2A6NFE2 343 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 MIF4GDA9UHW6 222 aaKnown RBP5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 RIOK3O14730 519 aaKnown RBP5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 EPHB4P54760 987 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 CAV1Q03135 178 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 ILF2Q12905 390 aaKnown RBP5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 KYAT1Q16773 422 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 SLC27A3Q5K4L6 730 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 EMBQ6PCB8 327 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 TTLL7Q6ZT98 887 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 VSTM4Q8IW00 320 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 SIRT2Q8IXJ6 389 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 PPFIBP2Q8ND30 876 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 EXOC4Q96A65 974 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 SCLT1Q96NL6 688 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 CSRNP1Q96S65 589 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 IFIH1Q9BYX4 1025 aaKnown RBP5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 PICK1Q9NRD5 415 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 DONSONQ9NYP3 566 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 TRPC5Q9UL62 973 aaPredicted RBP5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 GUCA1BQ9UMX6 200 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 MRVI1Q9Y6F6 885 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 UBE4BO95155 1302 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 ITIH6Q6UXX5 1313 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 RPS6KA4O75676 772 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 GGPS1O95749 300 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 TTLL1O95922 423 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 A1BGP04217 495 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 H2AFZP0C0S5 128 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 COPB1P53618 953 aaKnown RBP5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 CBX1P83916 185 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 PTH1RQ03431 593 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 SCRN1Q12765 414 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 NR1H3Q13133 447 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 CUL1Q13616 776 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 ZNF174Q15697 407 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 FAM26FQ5R3K3 315 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 RESP18Q5W5W9 173 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 ZNF365Q70YC5 407 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 H2AFVQ71UI9 128 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 GIMAP8Q8ND71 665 aaPredicted RBP5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 TEKT3Q9BXF9 490 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 VCX3BQ9H321 246 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 SYNCQ9H7C4 482 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 RNF216Q9NWF9 866 aaPredicted RBP5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 KCND2Q9NZV8 630 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 PCDHA12Q9UN75 941 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 TRPC6Q9Y210 931 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 EPN1Q9Y6I3 576 aaPredicted RBP5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 PFASO15067 1338 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 SCN4AP35499 1836 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 GRID2IPA4D2P6 1211 aa5.22□□□□□ -1.57
NDFIP1-202ENST00000503388 PABPN1LA6NDY0 278 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms