RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 HIPK3Q9H422 1215 aa7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 PRDM6Q9NQX0 595 aa7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 HOMER2Q9NSB8 354 aa7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 MSRAQ9UJ68 235 aa7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 CCPG1Q9ULG6 757 aa7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 PCDHA11Q9Y5I1 949 aa7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 RAD50Q92878 1312 aa7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 DYNC1LI2O43237 492 aaPredicted RBP7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 B4GALT4O60513 344 aa7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 RANBP6O60518 1105 aaKnown RBP7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 HSPD1P10809 573 aaKnown RBP7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 PDHBP11177 359 aa7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 PDE1AP54750 535 aa7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 MFAP1P55081 439 aaKnown RBP7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 BEX3Q00994 111 aa7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 GHRHRQ02643 423 aa7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 IKQ13123 557 aaPredicted RBP7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 SYDE2Q5VT97 1194 aa7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 RNF207Q6ZRF8 634 aa7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 KIAA1211Q6ZU35 1233 aa7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 SESTD1Q86VW0 696 aa7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 STK11IPQ8N1F8 1099 aa7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 SAMD3Q8N6K7 520 aa7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 SCFD2Q8WU76 684 aa7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 CLEC4DQ8WXI8 215 aa7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 VWCEQ96DN2 955 aa7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 TMEM47Q9BQJ4 181 aa7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 MTG1Q9BT17 334 aaPredicted RBP7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 WNT8AQ9H1J5 351 aa7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 OSBPL3Q9H4L5 887 aa7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 RNF41Q9H4P4 317 aaPredicted RBP7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 MAP3K20Q9NYL2 800 aaKnown RBP7.19□□□□□ -1.26
LSM3P4-201ENST00000502948 MYO9BQ13459 2157 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 NMT2O60551 498 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 BAIAP3O94812 1187 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 CYP2C18P33260 490 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 PBX2P40425 430 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 SLC4A3P48751 1232 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 IRX5P78411 483 aaPredicted RBP7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 CTDSPL2Q05D32 466 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 RBL2Q08999 1139 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 ZNF543Q08ER8 600 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 BAATQ14032 418 aaPredicted RBP7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 VPS53Q5VIR6 699 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 NSMFQ6X4W1 530 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 MFSD6Q6ZSS7 791 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 NOL8Q76FK4 1167 aaKnown RBP7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 FBXO16Q8IX29 292 aaPredicted RBP7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 OTUD7AQ8TE49 926 aaPredicted RBP7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 EMID1Q96A84 441 aaPredicted RBP7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 ASB2Q96Q27 587 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 IWS1Q96ST2 819 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 SLC9A7Q96T83 725 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 WDR11Q9BZH6 1224 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 PPP1R12CQ9BZL4 782 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 BCL11AQ9H165 835 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 SLC28A3Q9HAS3 691 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 PDGFCQ9NRA1 345 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 CXXC1Q9P0U4 656 aaPredicted RBP7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 THEGQ9P2T0 379 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 ZBTB47Q9UFB7 747 aaPredicted RBP7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 SLC4A7Q9Y6M7 1214 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 TNKSO95271 1327 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 SCN5AQ14524 2016 aa7.18□□□□□ -1.26
LSM3P4-201ENST00000502948 PTPRSQ13332 1948 aa7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 TRIP12Q14669 1992 aaPredicted RBP7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 TNFRSF10AO00220 468 aa7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 NFIBO00712 420 aa7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 ACRP10323 421 aa7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 ACTN1P12814 892 aa7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 RRP1P56182 461 aaKnown RBP7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 RPS6P62753 249 aaKnown RBP7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 MRPS5P82675 430 aaKnown RBP7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 PDE4DQ08499 809 aa7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 BFSP2Q13515 415 aa7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 TTLL4Q14679 1199 aa7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 PPP2R5BQ15173 497 aa7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 CCDC96Q2M329 555 aa7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 CCDC62Q6P9F0 684 aa7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 SMC5Q8IY18 1101 aa7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 USP38Q8NB14 1042 aa7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 CAGE1Q8TC20 777 aa7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 AFAP1L1Q8TED9 768 aa7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 ESR2Q92731 530 aa7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 TRPV6Q9H1D0 765 aa7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 TSPYL2Q9H2G4 693 aaPredicted RBP7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 GPHNQ9NQX3 736 aaPredicted RBP7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 LMCD1Q9NZU5 365 aa7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 ABCB11O95342 1321 aa7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 CCDC171Q6TFL3 1326 aa7.17□□□□□ -1.26
LSM3P4-201ENST00000502948 CHD9Q3L8U1 2897 aa7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 A0A0D9SFI3 127 aa7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 PTPDC1A2A3K4 754 aa7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 GRXCR1A8MXD5 290 aa7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 HIP1O00291 1037 aa7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 IQCF3P0C7M6 154 aa7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 HOXD8P13378 290 aaPredicted RBP7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 ADGRE1Q14246 886 aa7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 AAK1Q2M2I8 961 aa7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 ASPRV1Q53RT3 343 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms