RNA–Protein interactions for RNA: ENST00000502575.1

PDE4D-209, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-209ENST00000502575 LRRCC1Q9C099 1032 aa10.53□□□□□ -0.72
PDE4D-209ENST00000502575 RNF208Q9H0X6 261 aa10.53□□□□□ -0.72
PDE4D-209ENST00000502575 DCP1AQ9NPI6 582 aaPredicted RBP10.53□□□□□ -0.72
PDE4D-209ENST00000502575 ENAMQ9NRM1 1142 aa10.53□□□□□ -0.72
PDE4D-209ENST00000502575 RAB6BQ9NRW1 208 aa10.53□□□□□ -0.72
PDE4D-209ENST00000502575 MCM9Q9NXL9 1143 aa10.53□□□□□ -0.72
PDE4D-209ENST00000502575 MORF4L1Q9UBU8 362 aa10.53□□□□□ -0.72
PDE4D-209ENST00000502575 C19orf81C9J6K1 198 aa10.52□□□□□ -0.73
PDE4D-209ENST00000502575 ARHGEF15O94989 841 aa10.52□□□□□ -0.73
PDE4D-209ENST00000502575 POLR3DP05423 398 aaPredicted RBP10.52□□□□□ -0.73
PDE4D-209ENST00000502575 GJB1P08034 283 aa10.52□□□□□ -0.73
PDE4D-209ENST00000502575 HOXA7P31268 230 aaPredicted RBP10.52□□□□□ -0.73
PDE4D-209ENST00000502575 GJA8P48165 433 aa10.52□□□□□ -0.73
PDE4D-209ENST00000502575 SEPT2Q15019 361 aa10.52□□□□□ -0.73
PDE4D-209ENST00000502575 DBN1Q16643 649 aa10.52□□□□□ -0.73
PDE4D-209ENST00000502575 ABCB5Q2M3G0 1257 aa10.52□□□□□ -0.73
PDE4D-209ENST00000502575 UBE2Q1Q7Z7E8 422 aa10.52□□□□□ -0.73
PDE4D-209ENST00000502575 TTC6Q86TZ1 520 aa10.52□□□□□ -0.73
PDE4D-209ENST00000502575 CERS3Q8IU89 383 aa10.52□□□□□ -0.73
PDE4D-209ENST00000502575 COA7Q96BR5 231 aa10.52□□□□□ -0.73
PDE4D-209ENST00000502575 DYNLL2Q96FJ2 89 aa10.52□□□□□ -0.73
PDE4D-209ENST00000502575 FEZ1Q99689 392 aa10.52□□□□□ -0.73
PDE4D-209ENST00000502575 PAGR1Q9BTK6 254 aa10.52□□□□□ -0.73
PDE4D-209ENST00000502575 PORCNQ9H237 461 aa10.52□□□□□ -0.73
PDE4D-209ENST00000502575 GINM1Q9NU53 330 aa10.52□□□□□ -0.73
PDE4D-209ENST00000502575 RBPJLQ9UBG7 517 aa10.52□□□□□ -0.73
PDE4D-209ENST00000502575 GJD2Q9UKL4 321 aa10.52□□□□□ -0.73
PDE4D-209ENST00000502575 LTBP2Q14767 1821 aa10.51□□□□□ -0.73
PDE4D-209ENST00000502575 A0A1W2PRG0 241 aa10.51□□□□□ -0.73
PDE4D-209ENST00000502575 CNMDO75829 334 aa10.51□□□□□ -0.73
PDE4D-209ENST00000502575 VCAM1P19320 739 aa10.51□□□□□ -0.73
PDE4D-209ENST00000502575 ERVK-24P63145 666 aa10.51□□□□□ -0.73
PDE4D-209ENST00000502575 UBXN2AP68543 259 aa10.51□□□□□ -0.73
PDE4D-209ENST00000502575 KIAA1755Q5JYT7 1200 aa10.51□□□□□ -0.73
PDE4D-209ENST00000502575 TMED8Q6PL24 325 aaPredicted RBP10.51□□□□□ -0.73
PDE4D-209ENST00000502575 USP17L2Q6R6M4 530 aa10.51□□□□□ -0.73
PDE4D-209ENST00000502575 U2AF1L4Q8WU68 220 aaKnown RBP10.51□□□□□ -0.73
PDE4D-209ENST00000502575 C12orf42Q96LP6 360 aa10.51□□□□□ -0.73
PDE4D-209ENST00000502575 DEFB118Q96PH6 123 aa10.51□□□□□ -0.73
PDE4D-209ENST00000502575 NUCKS1Q9H1E3 243 aaKnown RBP10.51□□□□□ -0.73
PDE4D-209ENST00000502575 EYSQ5T1H1 3165 aa10.51□□□□□ -0.73
PDE4D-209ENST00000502575 H0YGN5 161 aa10.5□□□□□ -0.73
PDE4D-209ENST00000502575 MPHOSPH10O00566 681 aaKnown RBP10.5□□□□□ -0.73
PDE4D-209ENST00000502575 LZTS3O60299 673 aaPredicted RBP10.5□□□□□ -0.73
PDE4D-209ENST00000502575 CYP2B6P20813 491 aa10.5□□□□□ -0.73
PDE4D-209ENST00000502575 TMEM214Q6NUQ4 689 aaKnown RBP10.5□□□□□ -0.73
PDE4D-209ENST00000502575 OTUD7AQ8TE49 926 aaPredicted RBP10.5□□□□□ -0.73
PDE4D-209ENST00000502575 RHBDD1Q8TEB9 315 aa10.5□□□□□ -0.73
PDE4D-209ENST00000502575 TRIB2Q92519 343 aa10.5□□□□□ -0.73
PDE4D-209ENST00000502575 KIAA1683Q9H0B3 1180 aa10.5□□□□□ -0.73
PDE4D-209ENST00000502575 PUS7LQ9H0K6 701 aaKnown RBP10.5□□□□□ -0.73
PDE4D-209ENST00000502575 CHMP4BQ9H444 224 aaKnown RBP10.5□□□□□ -0.73
PDE4D-209ENST00000502575 PAK6Q9NQU5 681 aaPredicted RBP10.5□□□□□ -0.73
PDE4D-209ENST00000502575 PHF24Q9UPV7 400 aa10.5□□□□□ -0.73
PDE4D-209ENST00000502575 FARP2O94887 1054 aaPredicted RBP10.49□□□□□ -0.73
PDE4D-209ENST00000502575 SGPL1O95470 568 aa10.49□□□□□ -0.73
PDE4D-209ENST00000502575 HMGCRP04035 888 aa10.49□□□□□ -0.73
PDE4D-209ENST00000502575 AKR1B1P15121 316 aa10.49□□□□□ -0.73
PDE4D-209ENST00000502575 CCL14Q16627 93 aa10.49□□□□□ -0.73
PDE4D-209ENST00000502575 OXLD1Q5BKU9 147 aa10.49□□□□□ -0.73
PDE4D-209ENST00000502575 PLPP7Q8NBV4 271 aa10.49□□□□□ -0.73
PDE4D-209ENST00000502575 GPRC5AQ8NFJ5 357 aa10.49□□□□□ -0.73
PDE4D-209ENST00000502575 DIS3LQ8TF46 1054 aaKnown RBP10.49□□□□□ -0.73
PDE4D-209ENST00000502575 GTPBP3Q969Y2 492 aaKnown RBP10.49□□□□□ -0.73
PDE4D-209ENST00000502575 SCARF2Q96GP6 870 aaPredicted RBP10.49□□□□□ -0.73
PDE4D-209ENST00000502575 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.49□□□□□ -0.73
PDE4D-209ENST00000502575 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.49□□□□□ -0.73
PDE4D-209ENST00000502575 RPAP3Q9H6T3 665 aaPredicted RBP10.49□□□□□ -0.73
PDE4D-209ENST00000502575 DCTPP1Q9H773 170 aa10.49□□□□□ -0.73
PDE4D-209ENST00000502575 BTBD7Q9P203 1132 aa10.49□□□□□ -0.73
PDE4D-209ENST00000502575 LRRC37A2A6NM11 1700 aa10.49□□□□□ -0.73
PDE4D-209ENST00000502575 A0A0C4DFX4 3053 aa10.49□□□□□ -0.73
PDE4D-209ENST00000502575 USP17L15C9J2P7 530 aa10.48□□□□□ -0.73
PDE4D-209ENST00000502575 USP17L13C9JLJ4 530 aa10.48□□□□□ -0.73
PDE4D-209ENST00000502575 USP17L12C9JPN9 530 aa10.48□□□□□ -0.73
PDE4D-209ENST00000502575 USP17L11C9JVI0 530 aa10.48□□□□□ -0.73
PDE4D-209ENST00000502575 USP17L21D6R901 530 aa10.48□□□□□ -0.73
PDE4D-209ENST00000502575 USP17L18D6R9N7 530 aa10.48□□□□□ -0.73
PDE4D-209ENST00000502575 USP17L22D6RA61 530 aa10.48□□□□□ -0.73
PDE4D-209ENST00000502575 USP17L17D6RBQ6 530 aa10.48□□□□□ -0.73
PDE4D-209ENST00000502575 USP17L19D6RCP7 530 aa10.48□□□□□ -0.73
PDE4D-209ENST00000502575 USP17L20D6RJB6 530 aa10.48□□□□□ -0.73
PDE4D-209ENST00000502575 USP17L24Q0WX57 530 aa10.48□□□□□ -0.73
PDE4D-209ENST00000502575 UBE3CQ15386 1083 aa10.48□□□□□ -0.73
PDE4D-209ENST00000502575 HABP4Q5JVS0 413 aaKnown RBP10.48□□□□□ -0.73
PDE4D-209ENST00000502575 C12orf60Q5U649 245 aa10.48□□□□□ -0.73
PDE4D-209ENST00000502575 CATSPERGQ6ZRH7 1159 aa10.48□□□□□ -0.73
PDE4D-209ENST00000502575 GPR142Q7Z601 462 aa10.48□□□□□ -0.73
PDE4D-209ENST00000502575 SIAH1Q8IUQ4 282 aa10.48□□□□□ -0.73
PDE4D-209ENST00000502575 USP6NLQ92738 828 aa10.48□□□□□ -0.73
PDE4D-209ENST00000502575 CABP5Q9NP86 173 aa10.48□□□□□ -0.73
PDE4D-209ENST00000502575 ECHDC1Q9NTX5 307 aa10.48□□□□□ -0.73
PDE4D-209ENST00000502575 SLC4A4Q9Y6R1 1079 aa10.48□□□□□ -0.73
PDE4D-209ENST00000502575 CDH23Q9H251 3354 aa10.48□□□□□ -0.73
PDE4D-209ENST00000502575 UNC80Q8N2C7 3258 aa10.47□□□□□ -0.73
PDE4D-209ENST00000502575 M0R2C6 588 aa10.47□□□□□ -0.73
PDE4D-209ENST00000502575 MAP2K3P46734 347 aa10.47□□□□□ -0.73
PDE4D-209ENST00000502575 CDK8P49336 464 aa10.47□□□□□ -0.73
PDE4D-209ENST00000502575 USP14P54578 494 aa10.47□□□□□ -0.73
PDE4D-209ENST00000502575 RRP1P56182 461 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms