RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 ME3Q16798 604 aa20.59■□□□□ 0.89
CCHCR1-216ENST00000502557 MAMDC4Q6UXC1 1216 aa20.59■□□□□ 0.89
CCHCR1-216ENST00000502557 HEATR3Q7Z4Q2 680 aa20.59■□□□□ 0.89
CCHCR1-216ENST00000502557 MSL3Q8N5Y2 521 aaKnown RBP20.59■□□□□ 0.89
CCHCR1-216ENST00000502557 SYTL5Q8TDW5 730 aaPredicted RBP20.59■□□□□ 0.89
CCHCR1-216ENST00000502557 PHKBQ93100 1093 aa20.59■□□□□ 0.89
CCHCR1-216ENST00000502557 PRPF3O43395 683 aaKnown RBP20.58■□□□□ 0.89
CCHCR1-216ENST00000502557 PPFIA3O75145 1194 aa20.58■□□□□ 0.89
CCHCR1-216ENST00000502557 CFBP00751 764 aa20.58■□□□□ 0.89
CCHCR1-216ENST00000502557 HSD17B4P51659 736 aa20.58■□□□□ 0.89
CCHCR1-216ENST00000502557 WWC2Q6AWC2 1192 aa20.58■□□□□ 0.89
CCHCR1-216ENST00000502557 TRPV1Q8NER1 839 aa20.58■□□□□ 0.89
CCHCR1-216ENST00000502557 GPKOWQ92917 476 aaPredicted RBP eCLIP20.58■□□□□ 0.895e-9■■■■□ 21.7
CCHCR1-216ENST00000502557 COL20A1Q9P218 1284 aa20.58■□□□□ 0.89
CCHCR1-216ENST00000502557 RPTORQ8N122 1335 aa20.57■□□□□ 0.88
CCHCR1-216ENST00000502557 SYNGAP1Q96PV0 1343 aa20.57■□□□□ 0.88
CCHCR1-216ENST00000502557 CPLX1O14810 134 aa20.57■□□□□ 0.88
CCHCR1-216ENST00000502557 SNAI1O95863 264 aaPredicted RBP20.57■□□□□ 0.88
CCHCR1-216ENST00000502557 CYBAP13498 195 aa20.57■□□□□ 0.88
CCHCR1-216ENST00000502557 PRAMEF19Q5SWL8 479 aa20.57■□□□□ 0.88
CCHCR1-216ENST00000502557 NECAB1Q8N987 351 aa20.57■□□□□ 0.88
CCHCR1-216ENST00000502557 SLC26A6Q9BXS9 759 aa20.57■□□□□ 0.88
CCHCR1-216ENST00000502557 RNF26Q9BY78 433 aaPredicted RBP20.57■□□□□ 0.88
CCHCR1-216ENST00000502557 RNF208Q9H0X6 261 aa20.57■□□□□ 0.88
CCHCR1-216ENST00000502557 HMX1Q9NP08 348 aaPredicted RBP20.57■□□□□ 0.88
CCHCR1-216ENST00000502557 GCOM1H8Y6P7 765 aaPredicted RBP20.56■□□□□ 0.88
CCHCR1-216ENST00000502557 POLR2MP0CAP2 368 aa20.56■□□□□ 0.88
CCHCR1-216ENST00000502557 CCND3P30281 292 aaPredicted RBP20.56■□□□□ 0.88
CCHCR1-216ENST00000502557 HOXA13P31271 388 aaPredicted RBP20.56■□□□□ 0.88
CCHCR1-216ENST00000502557 ALDH5A1P51649 535 aaPredicted RBP20.56■□□□□ 0.88
CCHCR1-216ENST00000502557 PKN1Q16512 942 aa20.56■□□□□ 0.88
CCHCR1-216ENST00000502557 PFKFB3Q16875 520 aaPredicted RBP20.56■□□□□ 0.88
CCHCR1-216ENST00000502557 TYW1BQ6NUM6 668 aa20.56■□□□□ 0.88
CCHCR1-216ENST00000502557 ARMCX2Q7L311 632 aa20.56■□□□□ 0.88
CCHCR1-216ENST00000502557 SAMD3Q8N6K7 520 aa20.56■□□□□ 0.88
CCHCR1-216ENST00000502557 TAAR1Q96RJ0 339 aa20.56■□□□□ 0.88
CCHCR1-216ENST00000502557 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.56■□□□□ 0.88
CCHCR1-216ENST00000502557 MAP3K20Q9NYL2 800 aaKnown RBP20.56■□□□□ 0.88
CCHCR1-216ENST00000502557 RBM27Q9P2N5 1060 aaKnown RBP20.56■□□□□ 0.88
CCHCR1-216ENST00000502557 ADD3Q9UEY8 706 aaKnown RBP20.56■□□□□ 0.88
CCHCR1-216ENST00000502557 LIMCH1Q9UPQ0 1083 aa20.56■□□□□ 0.88
CCHCR1-216ENST00000502557 DDX49Q9Y6V7 483 aaKnown RBP20.56■□□□□ 0.88
CCHCR1-216ENST00000502557 ASB14A6NK59 587 aa20.55■□□□□ 0.88
CCHCR1-216ENST00000502557 hCG_1984214I3L0E3 225 aa20.55■□□□□ 0.88
CCHCR1-216ENST00000502557 STXBP3O00186 592 aa20.55■□□□□ 0.88
CCHCR1-216ENST00000502557 SCG2P13521 617 aa20.55■□□□□ 0.88
CCHCR1-216ENST00000502557 AKAP17AQ02040 695 aaKnown RBP20.55■□□□□ 0.88
CCHCR1-216ENST00000502557 CPLX2Q6PUV4 134 aaKnown RBP20.55■□□□□ 0.88
CCHCR1-216ENST00000502557 ZNF713Q8N859 430 aaPredicted RBP20.55■□□□□ 0.88
CCHCR1-216ENST00000502557 DNERQ8NFT8 737 aa20.55■□□□□ 0.88
CCHCR1-216ENST00000502557 MORC4Q8TE76 937 aa20.55■□□□□ 0.88
CCHCR1-216ENST00000502557 GTF3C6Q969F1 213 aa20.55■□□□□ 0.88
CCHCR1-216ENST00000502557 TMEM106CQ9BVX2 250 aa20.55■□□□□ 0.88
CCHCR1-216ENST00000502557 PAK6Q9NQU5 681 aaPredicted RBP20.55■□□□□ 0.88
CCHCR1-216ENST00000502557 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.55■□□□□ 0.88
CCHCR1-216ENST00000502557 BARHL2Q9NY43 387 aa20.55■□□□□ 0.88
CCHCR1-216ENST00000502557 NRBP1Q9UHY1 535 aa20.55■□□□□ 0.88
CCHCR1-216ENST00000502557 ZNF865P0CJ78 1059 aaPredicted RBP20.54■□□□□ 0.88
CCHCR1-216ENST00000502557 NAPAP54920 295 aa20.54■□□□□ 0.88
CCHCR1-216ENST00000502557 SSRP1Q08945 709 aaKnown RBP20.54■□□□□ 0.88
CCHCR1-216ENST00000502557 CNPY2Q9Y2B0 182 aa20.54■□□□□ 0.88
CCHCR1-216ENST00000502557 DOCK3Q8IZD9 2030 aa20.53■□□□□ 0.88
CCHCR1-216ENST00000502557 HTTP42858 3142 aa20.53■□□□□ 0.88
CCHCR1-216ENST00000502557 LOC102724159A0A0B4J2E5 919 aa20.53■□□□□ 0.88
CCHCR1-216ENST00000502557 POTEFA5A3E0 1075 aa20.53■□□□□ 0.88
CCHCR1-216ENST00000502557 MEIS2O14770 477 aa20.53■□□□□ 0.88
CCHCR1-216ENST00000502557 CTDNEP1O95476 244 aa20.53■□□□□ 0.88
CCHCR1-216ENST00000502557 GJB1P08034 283 aa20.53■□□□□ 0.88
CCHCR1-216ENST00000502557 SOX10P56693 466 aa20.53■□□□□ 0.88
CCHCR1-216ENST00000502557 ST3GAL1Q11201 340 aa20.53■□□□□ 0.88
CCHCR1-216ENST00000502557 PWP2Q15269 919 aaKnown RBP20.53■□□□□ 0.88
CCHCR1-216ENST00000502557 PPP1R18Q6NYC8 613 aa20.53■□□□□ 0.88
CCHCR1-216ENST00000502557 TRIM22Q8IYM9 498 aa20.53■□□□□ 0.88
CCHCR1-216ENST00000502557 IL27Q8NEV9 243 aa20.53■□□□□ 0.88
CCHCR1-216ENST00000502557 KATNBL1Q9H079 304 aa20.53■□□□□ 0.88
CCHCR1-216ENST00000502557 PSTPIP2Q9H939 334 aa20.53■□□□□ 0.88
CCHCR1-216ENST00000502557 PIK3CDO00329 1044 aa20.52■□□□□ 0.88
CCHCR1-216ENST00000502557 ST18O60284 1047 aa20.52■□□□□ 0.88
CCHCR1-216ENST00000502557 DTNBO60941 627 aa20.52■□□□□ 0.88
CCHCR1-216ENST00000502557 CDKL5O76039 1030 aa20.52■□□□□ 0.88
CCHCR1-216ENST00000502557 EDNRBP24530 442 aa20.52■□□□□ 0.88
CCHCR1-216ENST00000502557 USP17L6PQ6QN14 398 aa20.52■□□□□ 0.88
CCHCR1-216ENST00000502557 NSUN6Q8TEA1 469 aaKnown RBP20.52■□□□□ 0.88
CCHCR1-216ENST00000502557 ZSCAN31Q96LW9 406 aaPredicted RBP20.52■□□□□ 0.88
CCHCR1-216ENST00000502557 DEFB118Q96PH6 123 aa20.52■□□□□ 0.88
CCHCR1-216ENST00000502557 RMDN3Q96TC7 470 aa20.52■□□□□ 0.88
CCHCR1-216ENST00000502557 CD2BP2O95400 341 aaKnown RBP20.51■□□□□ 0.87
CCHCR1-216ENST00000502557 CNGA1P29973 690 aa20.51■□□□□ 0.87
CCHCR1-216ENST00000502557 ACVR2BQ13705 512 aa20.51■□□□□ 0.87
CCHCR1-216ENST00000502557 FCHSD1Q86WN1 690 aa20.51■□□□□ 0.87
CCHCR1-216ENST00000502557 SMARCC2Q8TAQ2 1214 aa20.51■□□□□ 0.87
CCHCR1-216ENST00000502557 CUL5Q93034 780 aa20.51■□□□□ 0.87
CCHCR1-216ENST00000502557 ABHD16BQ9H3Z7 469 aa20.51■□□□□ 0.87
CCHCR1-216ENST00000502557 PXMP2Q9NR77 195 aa20.51■□□□□ 0.87
CCHCR1-216ENST00000502557 ZHX1Q9UKY1 873 aaPredicted RBP20.51■□□□□ 0.87
CCHCR1-216ENST00000502557 SMCO2A6NFE2 343 aa20.5■□□□□ 0.87
CCHCR1-216ENST00000502557 SEPT4O43236 478 aa20.5■□□□□ 0.87
CCHCR1-216ENST00000502557 DEXIO95424 95 aa20.5■□□□□ 0.87
CCHCR1-216ENST00000502557 EIF2AK2P19525 551 aaKnown RBP20.5■□□□□ 0.87
CCHCR1-216ENST00000502557 PDE4DQ08499 809 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms