RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 METAP2P50579 478 aaKnown RBP eCLIP8.45□□□□□ -1.06
USP46-203ENST00000502443 RCAN1P53805 252 aa8.45□□□□□ -1.06
USP46-203ENST00000502443 MLLT1Q03111 559 aaPredicted RBP8.45□□□□□ -1.06
USP46-203ENST00000502443 TOB2Q14106 344 aaPredicted RBP8.45□□□□□ -1.06
USP46-203ENST00000502443 PPP2R5BQ15173 497 aa8.45□□□□□ -1.06
USP46-203ENST00000502443 ANO1Q5XXA6 986 aa8.45□□□□□ -1.06
USP46-203ENST00000502443 ARMCX2Q7L311 632 aa8.45□□□□□ -1.06
USP46-203ENST00000502443 RGS22Q8NE09 1264 aa8.45□□□□□ -1.06
USP46-203ENST00000502443 TBC1D5Q92609 795 aa8.45□□□□□ -1.06
USP46-203ENST00000502443 LARP6Q9BRS8 491 aaKnown RBP8.45□□□□□ -1.06
USP46-203ENST00000502443 AGXT2Q9BYV1 514 aa8.45□□□□□ -1.06
USP46-203ENST00000502443 MAF1Q9H063 256 aa8.45□□□□□ -1.06
USP46-203ENST00000502443 PDRG1Q9NUG6 133 aa8.45□□□□□ -1.06
USP46-203ENST00000502443 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.45□□□□□ -1.06
USP46-203ENST00000502443 ADD3Q9UEY8 706 aaKnown RBP8.45□□□□□ -1.06
USP46-203ENST00000502443 DDX20Q9UHI6 824 aaKnown RBP8.45□□□□□ -1.06
USP46-203ENST00000502443 NRBP1Q9UHY1 535 aa8.45□□□□□ -1.06
USP46-203ENST00000502443 ZHX1Q9UKY1 873 aaPredicted RBP8.45□□□□□ -1.06
USP46-203ENST00000502443 DDX49Q9Y6V7 483 aaKnown RBP8.45□□□□□ -1.06
USP46-203ENST00000502443 ASTN1O14525 1302 aa8.45□□□□□ -1.06
USP46-203ENST00000502443 CCDC196A0A1B0GTZ2 297 aa8.44□□□□□ -1.06
USP46-203ENST00000502443 B4DLN1 442 aa8.44□□□□□ -1.06
USP46-203ENST00000502443 OPLAHO14841 1288 aa8.44□□□□□ -1.06
USP46-203ENST00000502443 ZNF865P0CJ78 1059 aaPredicted RBP8.44□□□□□ -1.06
USP46-203ENST00000502443 PDIA3P30101 505 aaKnown RBP8.44□□□□□ -1.06
USP46-203ENST00000502443 CDC27P30260 824 aa8.44□□□□□ -1.06
USP46-203ENST00000502443 ADD1P35611 737 aaKnown RBP8.44□□□□□ -1.06
USP46-203ENST00000502443 ALDH5A1P51649 535 aaPredicted RBP8.44□□□□□ -1.06
USP46-203ENST00000502443 MRPL12P52815 198 aaKnown RBP8.44□□□□□ -1.06
USP46-203ENST00000502443 CCT2P78371 535 aaKnown RBP8.44□□□□□ -1.06
USP46-203ENST00000502443 ACVR2BQ13705 512 aa8.44□□□□□ -1.06
USP46-203ENST00000502443 LHX8Q68G74 356 aa8.44□□□□□ -1.06
USP46-203ENST00000502443 EEPD1Q7L9B9 569 aa8.44□□□□□ -1.06
USP46-203ENST00000502443 DNERQ8NFT8 737 aa8.44□□□□□ -1.06
USP46-203ENST00000502443 MPHOSPH6Q99547 160 aaKnown RBP8.44□□□□□ -1.06
USP46-203ENST00000502443 CRISPLD2Q9H0B8 497 aa8.44□□□□□ -1.06
USP46-203ENST00000502443 ABHD16BQ9H3Z7 469 aa8.44□□□□□ -1.06
USP46-203ENST00000502443 FAM217BQ9NTX9 383 aaPredicted RBP8.44□□□□□ -1.06
USP46-203ENST00000502443 OGDHLQ9ULD0 1010 aa8.44□□□□□ -1.06
USP46-203ENST00000502443 V9GY48 417 aaPredicted RBP8.44□□□□□ -1.06
USP46-203ENST00000502443 FRMPD3Q5JV73 1810 aa8.43□□□□□ -1.06
USP46-203ENST00000502443 GCOM1H8Y6P7 765 aaPredicted RBP8.43□□□□□ -1.06
USP46-203ENST00000502443 FARP2O94887 1054 aaPredicted RBP8.43□□□□□ -1.06
USP46-203ENST00000502443 MYCNP04198 464 aaPredicted RBP8.43□□□□□ -1.06
USP46-203ENST00000502443 POLR2MP0CAP2 368 aa8.43□□□□□ -1.06
USP46-203ENST00000502443 RARBP10826 455 aa8.43□□□□□ -1.06
USP46-203ENST00000502443 AKR1A1P14550 325 aa8.43□□□□□ -1.06
USP46-203ENST00000502443 CAPN2P17655 700 aa8.43□□□□□ -1.06
USP46-203ENST00000502443 HOXA13P31271 388 aaPredicted RBP8.43□□□□□ -1.06
USP46-203ENST00000502443 HSD17B4P51659 736 aa8.43□□□□□ -1.06
USP46-203ENST00000502443 EVCP57679 992 aa8.43□□□□□ -1.06
USP46-203ENST00000502443 PDE4DQ08499 809 aa8.43□□□□□ -1.06
USP46-203ENST00000502443 FUT2Q10981 343 aa8.43□□□□□ -1.06
USP46-203ENST00000502443 CCDC144BQ3MJ40 725 aa8.43□□□□□ -1.06
USP46-203ENST00000502443 HEATR3Q7Z4Q2 680 aa8.43□□□□□ -1.06
USP46-203ENST00000502443 FBXO16Q8IX29 292 aaPredicted RBP8.43□□□□□ -1.06
USP46-203ENST00000502443 ANKLE1Q8NAG6 615 aa8.43□□□□□ -1.06
USP46-203ENST00000502443 SYTL5Q8TDW5 730 aaPredicted RBP8.43□□□□□ -1.06
USP46-203ENST00000502443 NSUN6Q8TEA1 469 aaKnown RBP8.43□□□□□ -1.06
USP46-203ENST00000502443 IL17RAQ96F46 866 aa8.43□□□□□ -1.06
USP46-203ENST00000502443 TAAR1Q96RJ0 339 aa8.43□□□□□ -1.06
USP46-203ENST00000502443 NCOA5Q9HCD5 579 aaKnown RBP8.43□□□□□ -1.06
USP46-203ENST00000502443 MAP3K20Q9NYL2 800 aaKnown RBP8.43□□□□□ -1.06
USP46-203ENST00000502443 COL20A1Q9P218 1284 aa8.43□□□□□ -1.06
USP46-203ENST00000502443 FAM184BQ9ULE4 1060 aa8.43□□□□□ -1.06
USP46-203ENST00000502443 CNTNAP5Q8WYK1 1306 aa8.43□□□□□ -1.06
USP46-203ENST00000502443 MKI67P46013 3256 aaKnown RBP8.42□□□□□ -1.06
USP46-203ENST00000502443 LOC102724159A0A0B4J2E5 919 aa8.42□□□□□ -1.06
USP46-203ENST00000502443 NEK4P51957 841 aa8.42□□□□□ -1.06
USP46-203ENST00000502443 AKAP17AQ02040 695 aaKnown RBP8.42□□□□□ -1.06
USP46-203ENST00000502443 GHRHRQ02643 423 aa8.42□□□□□ -1.06
USP46-203ENST00000502443 STK3Q13188 491 aa8.42□□□□□ -1.06
USP46-203ENST00000502443 PWP2Q15269 919 aaKnown RBP8.42□□□□□ -1.06
USP46-203ENST00000502443 ANKRD1Q15327 319 aa8.42□□□□□ -1.06
USP46-203ENST00000502443 ARHGEF16Q5VV41 709 aa8.42□□□□□ -1.06
USP46-203ENST00000502443 NOL8Q76FK4 1167 aaKnown RBP8.42□□□□□ -1.06
USP46-203ENST00000502443 NECAB2Q7Z6G3 386 aa8.42□□□□□ -1.06
USP46-203ENST00000502443 FCHSD1Q86WN1 690 aa8.42□□□□□ -1.06
USP46-203ENST00000502443 SAMD3Q8N6K7 520 aa8.42□□□□□ -1.06
USP46-203ENST00000502443 ARRDC4Q8NCT1 418 aa8.42□□□□□ -1.06
USP46-203ENST00000502443 MORC4Q8TE76 937 aa8.42□□□□□ -1.06
USP46-203ENST00000502443 DIS3LQ8TF46 1054 aaKnown RBP8.42□□□□□ -1.06
USP46-203ENST00000502443 GPKOWQ92917 476 aaPredicted RBP eCLIP8.42□□□□□ -1.06
USP46-203ENST00000502443 CUL5Q93034 780 aa8.42□□□□□ -1.06
USP46-203ENST00000502443 LENG1Q96BZ8 264 aaPredicted RBP8.42□□□□□ -1.06
USP46-203ENST00000502443 ZNF274Q96GC6 653 aaPredicted RBP8.42□□□□□ -1.06
USP46-203ENST00000502443 PAWRQ96IZ0 340 aaKnown RBP8.42□□□□□ -1.06
USP46-203ENST00000502443 RMDN3Q96TC7 470 aa8.42□□□□□ -1.06
USP46-203ENST00000502443 C22orf23Q9BZE7 217 aa8.42□□□□□ -1.06
USP46-203ENST00000502443 KATNBL1Q9H079 304 aa8.42□□□□□ -1.06
USP46-203ENST00000502443 UPF2Q9HAU5 1272 aaKnown RBP8.42□□□□□ -1.06
USP46-203ENST00000502443 VTA1Q9NP79 307 aa8.42□□□□□ -1.06
USP46-203ENST00000502443 XPNPEP3Q9NQH7 507 aa8.42□□□□□ -1.06
USP46-203ENST00000502443 NID2Q14112 1375 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 KBTBD13C9JR72 458 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 CPLX1O14810 134 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 PPFIA3O75145 1194 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 DUSP11O75319 330 aaKnown RBP8.41□□□□□ -1.06
USP46-203ENST00000502443 PGK1P00558 417 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 EIF2AK2P19525 551 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms