RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 MSRAQ9UJ68 235 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 PALD1Q9ULE6 856 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 PA2G4Q9UQ80 394 aaKnown RBP5.26□□□□□ -1.57
MATR3-202ENST00000502422 MORC2Q9Y6X9 1032 aaPredicted RBP5.26□□□□□ -1.57
MATR3-202ENST00000502422 SYCE3A1L190 88 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 KIAA0355O15063 1070 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 CNMDO75829 334 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 RARSP54136 660 aaKnown RBP5.25□□□□□ -1.57
MATR3-202ENST00000502422 JAG1P78504 1218 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 NCBP1Q09161 790 aaKnown RBP5.25□□□□□ -1.57
MATR3-202ENST00000502422 PLS1Q14651 629 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 FAM47AQ5JRC9 791 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 MICALL1Q8N3F8 863 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 NUP133Q8WUM0 1156 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 VTI1AQ96AJ9 217 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 C12orf42Q96LP6 360 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.25□□□□□ -1.576e-7■□□□□ 10.8
MATR3-202ENST00000502422 PBX4Q9BYU1 374 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 STARD7Q9NQZ5 370 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 FAM53CQ9NYF3 392 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 HMG20BQ9P0W2 317 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 BTBD7Q9P203 1132 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 PLXNA1Q9UIW2 1896 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 FLT1P17948 1338 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 SMCHD1A6NHR9 2005 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 VCAM1P19320 739 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 ERCC3P19447 782 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 PPIGQ13427 754 aaKnown RBP eCLIP5.25□□□□□ -1.579e-7■■□□□ 13.7
MATR3-202ENST00000502422 COG2Q14746 738 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 SHROOM1Q2M3G4 852 aaPredicted RBP5.25□□□□□ -1.57
MATR3-202ENST00000502422 PI16Q6UXB8 463 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 LBX2Q6XYB7 198 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 THSD4Q6ZMP0 1018 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 NCAPG2Q86XI2 1143 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 SCUBE3Q8IX30 993 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 RETREG2Q8NC44 543 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 RNF214Q8ND24 703 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 EPS8L1Q8TE68 723 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 ZNF384Q8TF68 577 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 CHMP4CQ96CF2 233 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 THAP11Q96EK4 314 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 MTIF3Q9H2K0 278 aaKnown RBP5.25□□□□□ -1.57
MATR3-202ENST00000502422 RPAP3Q9H6T3 665 aaPredicted RBP5.25□□□□□ -1.57
MATR3-202ENST00000502422 DNAJC18Q9H819 358 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 YY1AP1Q9H869 796 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 COPRSQ9NQ92 184 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 SAP30BPQ9UHR5 308 aaKnown RBP5.25□□□□□ -1.57
MATR3-202ENST00000502422 FEZ2Q9UHY8 353 aaPredicted RBP5.25□□□□□ -1.57
MATR3-202ENST00000502422 ZDHHC9Q9Y397 364 aa5.25□□□□□ -1.57
MATR3-202ENST00000502422 CDK5RAP2Q96SN8 1893 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 A0A1W2PQ45 241 aaPredicted RBP5.24□□□□□ -1.57
MATR3-202ENST00000502422 A0A1W2PQY0 241 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 CCDC66A2RUB6 948 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 GRXCR1A8MXD5 290 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 PRPF40AO75400 957 aaKnown RBP5.24□□□□□ -1.57
MATR3-202ENST00000502422 PGK1P00558 417 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 TIMP1P01033 207 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 USP5P45974 858 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 FAAP100Q0VG06 881 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 TFCP2Q12800 502 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 RAB30Q15771 203 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 ABCB5Q2M3G0 1257 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 CERKLQ49MI3 558 aaPredicted RBP5.24□□□□□ -1.57
MATR3-202ENST00000502422 MFSD5Q6N075 450 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 BRICD5Q6PL45 260 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 RETREG3Q86VR2 466 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 TMEM199Q8N511 208 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 KCTD12Q96CX2 325 aaKnown RBP5.24□□□□□ -1.57
MATR3-202ENST00000502422 CHAMP1Q96JM3 812 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 TOX2Q96NM4 488 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 NECAB3Q96P71 396 aaPredicted RBP5.24□□□□□ -1.57
MATR3-202ENST00000502422 LRFN3Q9BTN0 628 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 PRR14Q9BWN1 585 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 MOV10L1Q9BXT6 1211 aaKnown RBP5.24□□□□□ -1.57
MATR3-202ENST00000502422 TANGO6Q9C0B7 1094 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 SPATC1LQ9H0A9 340 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 KIAA1683Q9H0B3 1180 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 TTC12Q9H892 705 aaPredicted RBP5.24□□□□□ -1.57
MATR3-202ENST00000502422 PRDM16Q9HAZ2 1276 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 PHF24Q9UPV7 400 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 PCDHB3Q9Y5E6 796 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 MROH7Q68CQ1 1323 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 NCOR1O75376 2440 aa5.24□□□□□ -1.57
MATR3-202ENST00000502422 COBLO75128 1261 aa5.23□□□□□ -1.57
MATR3-202ENST00000502422 UQCRFS1P1P0C7P4 283 aa5.23□□□□□ -1.57
MATR3-202ENST00000502422 FCER1AP12319 257 aa5.23□□□□□ -1.57
MATR3-202ENST00000502422 HDAC1Q13547 482 aaPredicted RBP5.23□□□□□ -1.57
MATR3-202ENST00000502422 TTC6Q86TZ1 520 aa5.23□□□□□ -1.57
MATR3-202ENST00000502422 METTL16Q86W50 562 aaKnown RBP5.23□□□□□ -1.57
MATR3-202ENST00000502422 MAML3Q96JK9 1138 aa5.23□□□□□ -1.57
MATR3-202ENST00000502422 GLT1D1Q96MS3 346 aa5.23□□□□□ -1.57
MATR3-202ENST00000502422 MROH8Q9H579 483 aa5.23□□□□□ -1.57
MATR3-202ENST00000502422 GEMIN8Q9NWZ8 242 aaKnown RBP5.23□□□□□ -1.57
MATR3-202ENST00000502422 SERPINB13Q9UIV8 391 aa5.23□□□□□ -1.57
MATR3-202ENST00000502422 KCNG1Q9UIX4 513 aa5.23□□□□□ -1.57
MATR3-202ENST00000502422 PRR33A8MZF0 331 aa5.23□□□□□ -1.57
MATR3-202ENST00000502422 MPHOSPH10O00566 681 aaKnown RBP5.23□□□□□ -1.57
MATR3-202ENST00000502422 SRGAP3O43295 1099 aa5.23□□□□□ -1.57
MATR3-202ENST00000502422 PTMAP06454 111 aaKnown RBP5.23□□□□□ -1.57
MATR3-202ENST00000502422 ACRP10323 421 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms