RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 TRIM32Q13049 653 aa17.97■□□□□ 0.47
CPNE1-228ENST00000498814 SLC30A10Q6XR72 485 aa17.97■□□□□ 0.47
CPNE1-228ENST00000498814 TBC1D5Q92609 795 aa17.97■□□□□ 0.47
CPNE1-228ENST00000498814 RNF26Q9BY78 433 aaPredicted RBP17.97■□□□□ 0.47
CPNE1-228ENST00000498814 hCG_1984214I3L0E3 225 aa17.96■□□□□ 0.47
CPNE1-228ENST00000498814 CPLX1O14810 134 aa17.96■□□□□ 0.47
CPNE1-228ENST00000498814 CALML3P27482 149 aa17.96■□□□□ 0.47
CPNE1-228ENST00000498814 CYP2C19P33261 490 aa17.96■□□□□ 0.47
CPNE1-228ENST00000498814 HSD17B4P51659 736 aa17.96■□□□□ 0.47
CPNE1-228ENST00000498814 CACNB2Q08289 660 aaPredicted RBP17.96■□□□□ 0.47
CPNE1-228ENST00000498814 SCRN1Q12765 414 aa17.96■□□□□ 0.47
CPNE1-228ENST00000498814 ME3Q16798 604 aa17.96■□□□□ 0.47
CPNE1-228ENST00000498814 CPLX2Q6PUV4 134 aaKnown RBP17.96■□□□□ 0.47
CPNE1-228ENST00000498814 ZNF713Q8N859 430 aaPredicted RBP17.96■□□□□ 0.47
CPNE1-228ENST00000498814 ADD3Q9UEY8 706 aaKnown RBP17.96■□□□□ 0.47
CPNE1-228ENST00000498814 LIMCH1Q9UPQ0 1083 aa17.96■□□□□ 0.47
CPNE1-228ENST00000498814 SYNGAP1Q96PV0 1343 aa17.96■□□□□ 0.46
CPNE1-228ENST00000498814 KIAA0100Q14667 2235 aaKnown RBP17.95■□□□□ 0.46
CPNE1-228ENST00000498814 LOC102724159A0A0B4J2E5 919 aa17.95■□□□□ 0.46
CPNE1-228ENST00000498814 CFBP00751 764 aa17.95■□□□□ 0.46
CPNE1-228ENST00000498814 CCL5P13501 91 aa17.95■□□□□ 0.46
CPNE1-228ENST00000498814 PRKAR2AP13861 404 aaKnown RBP17.95■□□□□ 0.46
CPNE1-228ENST00000498814 PWP2Q15269 919 aaKnown RBP17.95■□□□□ 0.46
CPNE1-228ENST00000498814 MTFR1Q15390 333 aa17.95■□□□□ 0.46
CPNE1-228ENST00000498814 PFKFB3Q16875 520 aaPredicted RBP17.95■□□□□ 0.46
CPNE1-228ENST00000498814 NOL8Q76FK4 1167 aaKnown RBP17.95■□□□□ 0.46
CPNE1-228ENST00000498814 HEATR3Q7Z4Q2 680 aa17.95■□□□□ 0.46
CPNE1-228ENST00000498814 DNERQ8NFT8 737 aa17.95■□□□□ 0.46
CPNE1-228ENST00000498814 SYTL5Q8TDW5 730 aaPredicted RBP17.95■□□□□ 0.46
CPNE1-228ENST00000498814 PHKBQ93100 1093 aa17.95■□□□□ 0.46
CPNE1-228ENST00000498814 ASTN1O14525 1302 aa17.95■□□□□ 0.46
CPNE1-228ENST00000498814 RPTORQ8N122 1335 aa17.95■□□□□ 0.46
CPNE1-228ENST00000498814 ASB14A6NK59 587 aa17.94■□□□□ 0.46
CPNE1-228ENST00000498814 ST18O60284 1047 aa17.94■□□□□ 0.46
CPNE1-228ENST00000498814 LARGE1O95461 756 aa17.94■□□□□ 0.46
CPNE1-228ENST00000498814 SCG2P13521 617 aa17.94■□□□□ 0.46
CPNE1-228ENST00000498814 AKAP17AQ02040 695 aaKnown RBP17.94■□□□□ 0.46
CPNE1-228ENST00000498814 PKN1Q16512 942 aa17.94■□□□□ 0.46
CPNE1-228ENST00000498814 WWC2Q6AWC2 1192 aa17.94■□□□□ 0.46
CPNE1-228ENST00000498814 PPP1R18Q6NYC8 613 aa17.94■□□□□ 0.46
CPNE1-228ENST00000498814 TRIM22Q8IYM9 498 aa17.94■□□□□ 0.46
CPNE1-228ENST00000498814 GPKOWQ92917 476 aaPredicted RBP eCLIP17.94■□□□□ 0.461e-7■■■■□ 26.1
CPNE1-228ENST00000498814 GTF3C6Q969F1 213 aa17.94■□□□□ 0.46
CPNE1-228ENST00000498814 PURBQ96QR8 312 aaKnown RBP17.94■□□□□ 0.46
CPNE1-228ENST00000498814 SLC26A6Q9BXS9 759 aa17.94■□□□□ 0.46
CPNE1-228ENST00000498814 UNC93B1Q9H1C4 597 aa17.94■□□□□ 0.46
CPNE1-228ENST00000498814 HMX1Q9NP08 348 aaPredicted RBP17.94■□□□□ 0.46
CPNE1-228ENST00000498814 BARHL2Q9NY43 387 aa17.94■□□□□ 0.46
CPNE1-228ENST00000498814 NRBP1Q9UHY1 535 aa17.94■□□□□ 0.46
CPNE1-228ENST00000498814 CCDC85CA6NKD9 419 aa17.93■□□□□ 0.46
CPNE1-228ENST00000498814 GCOM1H8Y6P7 765 aaPredicted RBP17.93■□□□□ 0.46
CPNE1-228ENST00000498814 CDKL5O76039 1030 aa17.93■□□□□ 0.46
CPNE1-228ENST00000498814 SNAI1O95863 264 aaPredicted RBP17.93■□□□□ 0.46
CPNE1-228ENST00000498814 POLR2MP0CAP2 368 aa17.93■□□□□ 0.46
CPNE1-228ENST00000498814 CYBAP13498 195 aa17.93■□□□□ 0.46
CPNE1-228ENST00000498814 ALDH5A1P51649 535 aaPredicted RBP17.93■□□□□ 0.46
CPNE1-228ENST00000498814 SSRP1Q08945 709 aaKnown RBP17.93■□□□□ 0.46
CPNE1-228ENST00000498814 ARMCX2Q7L311 632 aa17.93■□□□□ 0.46
CPNE1-228ENST00000498814 TEX2Q8IWB9 1127 aa17.93■□□□□ 0.46
CPNE1-228ENST00000498814 MORC4Q8TE76 937 aa17.93■□□□□ 0.46
CPNE1-228ENST00000498814 ZSCAN31Q96LW9 406 aaPredicted RBP17.93■□□□□ 0.46
CPNE1-228ENST00000498814 TMEM106CQ9BVX2 250 aa17.93■□□□□ 0.46
CPNE1-228ENST00000498814 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.93■□□□□ 0.46
CPNE1-228ENST00000498814 RNF208Q9H0X6 261 aa17.93■□□□□ 0.46
CPNE1-228ENST00000498814 COL20A1Q9P218 1284 aa17.93■□□□□ 0.46
CPNE1-228ENST00000498814 STXBP3O00186 592 aa17.92■□□□□ 0.46
CPNE1-228ENST00000498814 PIK3CDO00329 1044 aa17.92■□□□□ 0.46
CPNE1-228ENST00000498814 MYCP01106 439 aaPredicted RBP17.92■□□□□ 0.46
CPNE1-228ENST00000498814 NECAB1Q8N987 351 aa17.92■□□□□ 0.46
CPNE1-228ENST00000498814 TRPV1Q8NER1 839 aa17.92■□□□□ 0.46
CPNE1-228ENST00000498814 TAAR1Q96RJ0 339 aa17.92■□□□□ 0.46
CPNE1-228ENST00000498814 PSTPIP2Q9H939 334 aa17.92■□□□□ 0.46
CPNE1-228ENST00000498814 PAK6Q9NQU5 681 aaPredicted RBP17.92■□□□□ 0.46
CPNE1-228ENST00000498814 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.92■□□□□ 0.46
CPNE1-228ENST00000498814 CNPY2Q9Y2B0 182 aa17.92■□□□□ 0.46
CPNE1-228ENST00000498814 LRRC37A2A6NM11 1700 aa17.92■□□□□ 0.46
CPNE1-228ENST00000498814 B4DLN1 442 aa17.91■□□□□ 0.46
CPNE1-228ENST00000498814 PPFIA3O75145 1194 aa17.91■□□□□ 0.46
CPNE1-228ENST00000498814 DEXIO95424 95 aa17.91■□□□□ 0.46
CPNE1-228ENST00000498814 GJB1P08034 283 aa17.91■□□□□ 0.46
CPNE1-228ENST00000498814 CCND3P30281 292 aaPredicted RBP17.91■□□□□ 0.46
CPNE1-228ENST00000498814 HOXA13P31271 388 aaPredicted RBP17.91■□□□□ 0.46
CPNE1-228ENST00000498814 MRPL12P52815 198 aaKnown RBP17.91■□□□□ 0.46
CPNE1-228ENST00000498814 NAPAP54920 295 aa17.91■□□□□ 0.46
CPNE1-228ENST00000498814 PRAMEF19Q5SWL8 479 aa17.91■□□□□ 0.46
CPNE1-228ENST00000498814 TYW1BQ6NUM6 668 aa17.91■□□□□ 0.46
CPNE1-228ENST00000498814 NSUN6Q8TEA1 469 aaKnown RBP17.91■□□□□ 0.46
CPNE1-228ENST00000498814 CUL5Q93034 780 aa17.91■□□□□ 0.46
CPNE1-228ENST00000498814 RMDN3Q96TC7 470 aa17.91■□□□□ 0.46
CPNE1-228ENST00000498814 MPHOSPH6Q99547 160 aaKnown RBP17.91■□□□□ 0.46
CPNE1-228ENST00000498814 ABHD16BQ9H3Z7 469 aa17.91■□□□□ 0.46
CPNE1-228ENST00000498814 SH2B1Q9NRF2 756 aaPredicted RBP17.91■□□□□ 0.46
CPNE1-228ENST00000498814 STK36Q9NRP7 1315 aa17.91■□□□□ 0.46
CPNE1-228ENST00000498814 FRMPD3Q5JV73 1810 aa17.91■□□□□ 0.46
CPNE1-228ENST00000498814 MEIS2O14770 477 aa17.9■□□□□ 0.46
CPNE1-228ENST00000498814 CTDNEP1O95476 244 aa17.9■□□□□ 0.46
CPNE1-228ENST00000498814 EDNRBP24530 442 aa17.9■□□□□ 0.46
CPNE1-228ENST00000498814 CCDC12Q8WUD4 166 aaPredicted RBP17.9■□□□□ 0.46
CPNE1-228ENST00000498814 IWS1Q96ST2 819 aa17.9■□□□□ 0.46
CPNE1-228ENST00000498814 KATNBL1Q9H079 304 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms