RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 STRBPQ96SI9 672 aaKnown RBP10.87□□□□□ -0.67
CCDC171-209ENST00000498725 MTMR4Q9NYA4 1195 aa10.87□□□□□ -0.67
CCDC171-209ENST00000498725 MTUS1Q9ULD2 1270 aa10.87□□□□□ -0.67
CCDC171-209ENST00000498725 COG5Q9UP83 839 aa10.87□□□□□ -0.67
CCDC171-209ENST00000498725 IGKV6D-41A0A0C4DH26 115 aa10.86□□□□□ -0.67
CCDC171-209ENST00000498725 SMARCA5O60264 1052 aaPredicted RBP10.86□□□□□ -0.67
CCDC171-209ENST00000498725 TTLL1O95922 423 aa10.86□□□□□ -0.67
CCDC171-209ENST00000498725 MCCP23508 829 aa10.86□□□□□ -0.67
CCDC171-209ENST00000498725 STAT2P52630 851 aa10.86□□□□□ -0.67
CCDC171-209ENST00000498725 OAZ1P54368 228 aa10.86□□□□□ -0.67
CCDC171-209ENST00000498725 GRB10Q13322 594 aa10.86□□□□□ -0.67
CCDC171-209ENST00000498725 RASGRP2Q7LDG7 609 aa10.86□□□□□ -0.67
CCDC171-209ENST00000498725 TET1Q8NFU7 2136 aa10.86□□□□□ -0.67
CCDC171-209ENST00000498725 GDPD5Q8WTR4 605 aa10.86□□□□□ -0.67
CCDC171-209ENST00000498725 UIMC1Q96RL1 719 aa10.86□□□□□ -0.67
CCDC171-209ENST00000498725 EPB41L4AQ9HCS5 686 aaPredicted RBP10.86□□□□□ -0.67
CCDC171-209ENST00000498725 C11orf16Q9NQ32 467 aa10.86□□□□□ -0.67
CCDC171-209ENST00000498725 GPHNQ9NQX3 736 aaPredicted RBP10.86□□□□□ -0.67
CCDC171-209ENST00000498725 ZNF536O15090 1300 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 NCOR1O75376 2440 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 KIF28PB7ZC32 967 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 RAB11FIP3O75154 756 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 HMMRO75330 724 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 SUPT20HL2P0C7V6 817 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 TSPY3P0CV98 308 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 TSPY8P0CW00 308 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 NBPF20Q3BBV1 942 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 HERC6Q8IVU3 1022 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 SIRT2Q8IXJ6 389 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 RETREG2Q8NC44 543 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 GMCL1P1Q8NEA9 526 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 OR6J1Q8NGC5 347 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 CHURC1Q8WUH1 139 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 OSBP2Q969R2 916 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 MKL1Q969V6 931 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 SLC9A7Q96T83 725 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 ZBED2Q9BTP6 218 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 WDR11Q9BZH6 1224 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 CD320Q9NPF0 282 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 POLR3EQ9NVU0 708 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 CYP39A1Q9NYL5 469 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 CCPG1Q9ULG6 757 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 SIP14410 1827 aa10.85□□□□□ -0.67
CCDC171-209ENST00000498725 LCHNA4D1U4 455 aa10.84□□□□□ -0.67
CCDC171-209ENST00000498725 M0R2C6 588 aa10.84□□□□□ -0.67
CCDC171-209ENST00000498725 PFKMP08237 780 aa10.84□□□□□ -0.67
CCDC171-209ENST00000498725 POU3F3P20264 500 aaPredicted RBP10.84□□□□□ -0.67
CCDC171-209ENST00000498725 SLC1A4P43007 532 aa10.84□□□□□ -0.67
CCDC171-209ENST00000498725 KCNJ6P48051 423 aa10.84□□□□□ -0.67
CCDC171-209ENST00000498725 PURAQ00577 322 aaKnown RBP10.84□□□□□ -0.67
CCDC171-209ENST00000498725 TFAP4Q01664 338 aa10.84□□□□□ -0.67
CCDC171-209ENST00000498725 FAM160B2Q86V87 743 aa10.84□□□□□ -0.67
CCDC171-209ENST00000498725 STAG1Q8WVM7 1258 aa10.84□□□□□ -0.67
CCDC171-209ENST00000498725 MTG1Q9BT17 334 aaPredicted RBP10.84□□□□□ -0.67
CCDC171-209ENST00000498725 SEZ6LQ9BYH1 1024 aa10.84□□□□□ -0.67
CCDC171-209ENST00000498725 VTA1Q9NP79 307 aa10.84□□□□□ -0.67
CCDC171-209ENST00000498725 NOD1Q9Y239 953 aa10.84□□□□□ -0.67
CCDC171-209ENST00000498725 PTPDC1A2A3K4 754 aa10.83□□□□□ -0.68
CCDC171-209ENST00000498725 GPAA1O43292 621 aa10.83□□□□□ -0.68
CCDC171-209ENST00000498725 GPR37L1O60883 481 aa10.83□□□□□ -0.68
CCDC171-209ENST00000498725 IQCF3P0C7M6 154 aa10.83□□□□□ -0.68
CCDC171-209ENST00000498725 FDX1P10109 184 aa10.83□□□□□ -0.68
CCDC171-209ENST00000498725 SSTR3P32745 418 aaPredicted RBP10.83□□□□□ -0.68
CCDC171-209ENST00000498725 CPT1AP50416 773 aa10.83□□□□□ -0.68
CCDC171-209ENST00000498725 BAATQ14032 418 aaPredicted RBP10.83□□□□□ -0.68
CCDC171-209ENST00000498725 CCDC96Q2M329 555 aa10.83□□□□□ -0.68
CCDC171-209ENST00000498725 TKFCQ3LXA3 575 aa10.83□□□□□ -0.68
CCDC171-209ENST00000498725 DUSP28Q4G0W2 176 aa10.83□□□□□ -0.68
CCDC171-209ENST00000498725 TSHZ3Q63HK5 1081 aa10.83□□□□□ -0.68
CCDC171-209ENST00000498725 FAM117BQ6P1L5 589 aa10.83□□□□□ -0.68
CCDC171-209ENST00000498725 RPAP2Q8IXW5 612 aaPredicted RBP10.83□□□□□ -0.68
CCDC171-209ENST00000498725 COPS5Q92905 334 aa10.83□□□□□ -0.68
CCDC171-209ENST00000498725 ZNF287Q9HBT7 754 aa10.83□□□□□ -0.68
CCDC171-209ENST00000498725 PRR12Q9ULL5 1215 aa10.83□□□□□ -0.68
CCDC171-209ENST00000498725 STX8Q9UNK0 236 aa10.83□□□□□ -0.68
CCDC171-209ENST00000498725 Q9Y3F1 56 aa10.83□□□□□ -0.68
CCDC171-209ENST00000498725 SCN10AQ9Y5Y9 1956 aa10.83□□□□□ -0.68
CCDC171-209ENST00000498725 NMT2O60551 498 aa10.82□□□□□ -0.68
CCDC171-209ENST00000498725 LPXNO60711 386 aa10.82□□□□□ -0.68
CCDC171-209ENST00000498725 CALML3P27482 149 aa10.82□□□□□ -0.68
CCDC171-209ENST00000498725 RFC2P35250 354 aa10.82□□□□□ -0.68
CCDC171-209ENST00000498725 SLC16A2P36021 539 aa10.82□□□□□ -0.68
CCDC171-209ENST00000498725 ALDH5A1P51649 535 aaPredicted RBP10.82□□□□□ -0.68
CCDC171-209ENST00000498725 DEFB103AP81534 67 aa10.82□□□□□ -0.68
CCDC171-209ENST00000498725 HNRNPUQ00839 825 aaKnown RBP eCLIP10.82□□□□□ -0.68
CCDC171-209ENST00000498725 PDE4BQ07343 736 aa10.82□□□□□ -0.68
CCDC171-209ENST00000498725 GIMAP6Q6P9H5 292 aa10.82□□□□□ -0.68
CCDC171-209ENST00000498725 IFNL3Q8IZI9 196 aa10.82□□□□□ -0.68
CCDC171-209ENST00000498725 NEDD1Q8NHV4 660 aa10.82□□□□□ -0.68
CCDC171-209ENST00000498725 PHOSPHO2Q8TCD6 241 aa10.82□□□□□ -0.68
CCDC171-209ENST00000498725 APPBP2Q92624 585 aa10.82□□□□□ -0.68
CCDC171-209ENST00000498725 CRBNQ96SW2 442 aa10.82□□□□□ -0.68
CCDC171-209ENST00000498725 SEC62Q99442 399 aaKnown RBP10.82□□□□□ -0.68
CCDC171-209ENST00000498725 INCENPQ9NQS7 918 aa10.82□□□□□ -0.68
CCDC171-209ENST00000498725 ARIH1Q9Y4X5 557 aaPredicted RBP10.82□□□□□ -0.68
CCDC171-209ENST00000498725 MYH7BA7E2Y1 1941 aa10.82□□□□□ -0.68
CCDC171-209ENST00000498725 PI4K2BG5E9Z4 385 aa10.81□□□□□ -0.68
CCDC171-209ENST00000498725 CCER2I3L3R5 266 aa10.81□□□□□ -0.68
CCDC171-209ENST00000498725 NFIBO00712 420 aa10.81□□□□□ -0.68
CCDC171-209ENST00000498725 RNF113AO15541 343 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms