RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 SLC5A1P13866 664 aa6.85□□□□□ -1.31
SPTA1-209ENST00000498708 POU3F3P20264 500 aaPredicted RBP6.85□□□□□ -1.31
SPTA1-209ENST00000498708 HOXA7P31268 230 aaPredicted RBP6.85□□□□□ -1.31
SPTA1-209ENST00000498708 PUM3Q15397 648 aaKnown RBP6.85□□□□□ -1.31
SPTA1-209ENST00000498708 RABL6Q3YEC7 729 aaPredicted RBP6.85□□□□□ -1.31
SPTA1-209ENST00000498708 FAM47AQ5JRC9 791 aa6.85□□□□□ -1.31
SPTA1-209ENST00000498708 HFE2Q6ZVN8 426 aa6.85□□□□□ -1.31
SPTA1-209ENST00000498708 ZSCAN29Q8IWY8 852 aaPredicted RBP6.85□□□□□ -1.31
SPTA1-209ENST00000498708 FAM178BQ8IXR5 827 aa6.85□□□□□ -1.31
SPTA1-209ENST00000498708 VGLL2Q8N8G2 317 aa6.85□□□□□ -1.31
SPTA1-209ENST00000498708 PRSS33Q8NF86 280 aa6.85□□□□□ -1.31
SPTA1-209ENST00000498708 ESYT1Q9BSJ8 1104 aa6.85□□□□□ -1.31
SPTA1-209ENST00000498708 CERS4Q9HA82 394 aa6.85□□□□□ -1.31
SPTA1-209ENST00000498708 DDX4Q9NQI0 724 aaKnown RBP6.85□□□□□ -1.31
SPTA1-209ENST00000498708 PHF24Q9UPV7 400 aa6.85□□□□□ -1.31
SPTA1-209ENST00000498708 SUGT1Q9Y2Z0 365 aa6.85□□□□□ -1.31
SPTA1-209ENST00000498708 PTPRZ1P23471 2315 aaPredicted RBP6.85□□□□□ -1.31
SPTA1-209ENST00000498708 BAHCC1Q9P281 2608 aa6.85□□□□□ -1.31
SPTA1-209ENST00000498708 EYA2O00167 538 aa6.84□□□□□ -1.31
SPTA1-209ENST00000498708 SEPT4O43236 478 aa6.84□□□□□ -1.31
SPTA1-209ENST00000498708 CNMDO75829 334 aa6.84□□□□□ -1.31
SPTA1-209ENST00000498708 CELA2BP08218 269 aaPredicted RBP6.84□□□□□ -1.31
SPTA1-209ENST00000498708 HOXC6P09630 235 aa6.84□□□□□ -1.31
SPTA1-209ENST00000498708 ALADP13716 330 aa6.84□□□□□ -1.31
SPTA1-209ENST00000498708 FGFR2P21802 821 aa6.84□□□□□ -1.31
SPTA1-209ENST00000498708 PRDX5P30044 214 aa6.84□□□□□ -1.31
SPTA1-209ENST00000498708 IRS1P35568 1242 aa6.84□□□□□ -1.31
SPTA1-209ENST00000498708 RFX5P48382 616 aaPredicted RBP6.84□□□□□ -1.31
SPTA1-209ENST00000498708 PPIGQ13427 754 aaKnown RBP eCLIP6.84□□□□□ -1.31
SPTA1-209ENST00000498708 LYPD4Q6UWN0 246 aa6.84□□□□□ -1.31
SPTA1-209ENST00000498708 SSH1Q8WYL5 1049 aa6.84□□□□□ -1.31
SPTA1-209ENST00000498708 GTPBP3Q969Y2 492 aaKnown RBP6.84□□□□□ -1.31
SPTA1-209ENST00000498708 USP44Q9H0E7 712 aa6.84□□□□□ -1.31
SPTA1-209ENST00000498708 CWC22Q9HCG8 908 aaKnown RBP6.84□□□□□ -1.31
SPTA1-209ENST00000498708 TBX21Q9UL17 535 aa6.84□□□□□ -1.31
SPTA1-209ENST00000498708 PA2G4Q9UQ80 394 aaKnown RBP6.84□□□□□ -1.31
SPTA1-209ENST00000498708 MYH2Q9UKX2 1941 aa6.84□□□□□ -1.32
SPTA1-209ENST00000498708 MYH13Q9UKX3 1938 aa6.84□□□□□ -1.32
SPTA1-209ENST00000498708 CACNA1FO60840 1977 aa6.83□□□□□ -1.32
SPTA1-209ENST00000498708 A0A1W2PQ45 241 aaPredicted RBP6.83□□□□□ -1.32
SPTA1-209ENST00000498708 A0A1W2PQY0 241 aa6.83□□□□□ -1.32
SPTA1-209ENST00000498708 SLC15A5A6NIM6 579 aa6.83□□□□□ -1.32
SPTA1-209ENST00000498708 USP17L5A8MUK1 530 aa6.83□□□□□ -1.32
SPTA1-209ENST00000498708 ENTPD3O75355 529 aa6.83□□□□□ -1.32
SPTA1-209ENST00000498708 LDHBP07195 334 aaKnown RBP6.83□□□□□ -1.32
SPTA1-209ENST00000498708 PHKA1P46020 1223 aa6.83□□□□□ -1.32
SPTA1-209ENST00000498708 JAG1P78504 1218 aa6.83□□□□□ -1.32
SPTA1-209ENST00000498708 PICALMQ13492 652 aa6.83□□□□□ -1.32
SPTA1-209ENST00000498708 GRB14Q14449 540 aa6.83□□□□□ -1.32
SPTA1-209ENST00000498708 ATP2B3Q16720 1220 aa6.83□□□□□ -1.32
SPTA1-209ENST00000498708 WDR78Q5VTH9 848 aa6.83□□□□□ -1.32
SPTA1-209ENST00000498708 ATG9AQ7Z3C6 839 aa6.83□□□□□ -1.32
SPTA1-209ENST00000498708 ANKRD33Q7Z3H0 272 aa6.83□□□□□ -1.32
SPTA1-209ENST00000498708 WDR66Q8TBY9 1149 aa6.83□□□□□ -1.32
SPTA1-209ENST00000498708 LPIN2Q92539 896 aa6.83□□□□□ -1.32
SPTA1-209ENST00000498708 IDI2Q9BXS1 227 aa6.83□□□□□ -1.32
SPTA1-209ENST00000498708 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.83□□□□□ -1.32
SPTA1-209ENST00000498708 DNMT3AQ9Y6K1 912 aaPredicted RBP6.83□□□□□ -1.32
SPTA1-209ENST00000498708 WDR87Q6ZQQ6 2873 aa6.83□□□□□ -1.32
SPTA1-209ENST00000498708 EPG5Q9HCE0 2579 aa6.83□□□□□ -1.32
SPTA1-209ENST00000498708 RFX7Q2KHR2 1363 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 PTPRCP08575 1304 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 ZNF521Q96K83 1311 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 A0A1B0GTH6 734 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 DCDC2CA8MYV0 355 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 PGK1P00558 417 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 UBTFL1P0CB47 393 aaPredicted RBP6.82□□□□□ -1.32
SPTA1-209ENST00000498708 MX2P20592 715 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 ADORA1P30542 326 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 CAP2P40123 477 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 BACE1P56817 501 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 CENPCQ03188 943 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 TCF15Q12870 199 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 USP4Q13107 963 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 SHROOM1Q2M3G4 852 aaPredicted RBP6.82□□□□□ -1.32
SPTA1-209ENST00000498708 GNASQ5JWF2 1037 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 PSRC1Q6PGN9 363 aaPredicted RBP6.82□□□□□ -1.32
SPTA1-209ENST00000498708 OTOP2Q7RTS6 562 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.82□□□□□ -1.32
SPTA1-209ENST00000498708 TOX2Q96NM4 488 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 PPP1R12CQ9BZL4 782 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 OSBPL5Q9H0X9 879 aaPredicted RBP6.82□□□□□ -1.32
SPTA1-209ENST00000498708 NUCKS1Q9H1E3 243 aaKnown RBP6.82□□□□□ -1.32
SPTA1-209ENST00000498708 RAB6BQ9NRW1 208 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 SMC4Q9NTJ3 1288 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 FAM86C1Q9NVL1 165 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 TMOD4Q9NZQ9 345 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 ABCF2Q9UG63 623 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 VPS13AQ96RL7 3174 aa6.82□□□□□ -1.32
SPTA1-209ENST00000498708 CFAP47Q6ZTR5 3102 aa6.81□□□□□ -1.32
SPTA1-209ENST00000498708 DCXO43602 365 aa6.81□□□□□ -1.32
SPTA1-209ENST00000498708 GLRX3O76003 335 aaKnown RBP6.81□□□□□ -1.32
SPTA1-209ENST00000498708 IGHA1P01876 353 aa6.81□□□□□ -1.32
SPTA1-209ENST00000498708 FGBP02675 491 aa6.81□□□□□ -1.32
SPTA1-209ENST00000498708 IL9P15248 144 aa6.81□□□□□ -1.32
SPTA1-209ENST00000498708 CYP2C18P33260 490 aa6.81□□□□□ -1.32
SPTA1-209ENST00000498708 TIMM10P62072 90 aa6.81□□□□□ -1.32
SPTA1-209ENST00000498708 SLFNL1Q499Z3 407 aa6.81□□□□□ -1.32
SPTA1-209ENST00000498708 OLFML2BQ68BL8 750 aa6.81□□□□□ -1.32
SPTA1-209ENST00000498708 CCDC174Q6PII3 467 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms