RNA–Protein interactions for RNA: ENST00000498644.5

MTA1-216, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-216ENST00000498644 PDGFCQ9NRA1 345 aa19.62■□□□□ 0.73
MTA1-216ENST00000498644 LAMA2P24043 3122 aaKnown RBP19.62■□□□□ 0.73
MTA1-216ENST00000498644 A0A0U1RQG5 324 aaPredicted RBP19.61■□□□□ 0.73
MTA1-216ENST00000498644 CABYRO75952 493 aa19.61■□□□□ 0.73
MTA1-216ENST00000498644 CYP21A2P08686 494 aa19.61■□□□□ 0.73
MTA1-216ENST00000498644 FAAP100Q0VG06 881 aa19.61■□□□□ 0.73
MTA1-216ENST00000498644 CDC37Q16543 378 aaPredicted RBP19.61■□□□□ 0.73
MTA1-216ENST00000498644 SLC30A10Q6XR72 485 aa19.61■□□□□ 0.73
MTA1-216ENST00000498644 KIAA1211Q6ZU35 1233 aa19.61■□□□□ 0.73
MTA1-216ENST00000498644 CYB5R4Q7L1T6 521 aa19.61■□□□□ 0.73
MTA1-216ENST00000498644 FBXO16Q8IX29 292 aaPredicted RBP19.61■□□□□ 0.73
MTA1-216ENST00000498644 TMEM39AQ9NV64 488 aa19.61■□□□□ 0.73
MTA1-216ENST00000498644 ABCB11O95342 1321 aa19.6■□□□□ 0.73
MTA1-216ENST00000498644 RBM47A0AV96 593 aaKnown RBP19.6■□□□□ 0.73
MTA1-216ENST00000498644 B4DLN1 442 aa19.6■□□□□ 0.73
MTA1-216ENST00000498644 ARVCFO00192 962 aa19.6■□□□□ 0.73
MTA1-216ENST00000498644 DYNC1LI2O43237 492 aaPredicted RBP19.6■□□□□ 0.73
MTA1-216ENST00000498644 ZEB2O60315 1214 aa19.6■□□□□ 0.73
MTA1-216ENST00000498644 RAG1P15918 1043 aa19.6■□□□□ 0.73
MTA1-216ENST00000498644 ITGB8P26012 769 aa19.6■□□□□ 0.73
MTA1-216ENST00000498644 MRPL12P52815 198 aaKnown RBP19.6■□□□□ 0.73
MTA1-216ENST00000498644 BEX3Q00994 111 aa19.6■□□□□ 0.73
MTA1-216ENST00000498644 FSCN1Q16658 493 aaKnown RBP19.6■□□□□ 0.73
MTA1-216ENST00000498644 USH1GQ495M9 461 aa19.6■□□□□ 0.73
MTA1-216ENST00000498644 DUSP28Q4G0W2 176 aa19.6■□□□□ 0.73
MTA1-216ENST00000498644 EDNRBP24530 442 aa19.59■□□□□ 0.73
MTA1-216ENST00000498644 MAP4K1Q92918 833 aa19.59■□□□□ 0.73
MTA1-216ENST00000498644 SEZ6LQ9BYH1 1024 aa19.59■□□□□ 0.73
MTA1-216ENST00000498644 WDR11Q9BZH6 1224 aa19.59■□□□□ 0.73
MTA1-216ENST00000498644 JMJD4Q9H9V9 463 aa19.59■□□□□ 0.73
MTA1-216ENST00000498644 MYH6P13533 1939 aa19.59■□□□□ 0.73
MTA1-216ENST00000498644 PDE4DQ08499 809 aa19.58■□□□□ 0.72
MTA1-216ENST00000498644 SHHQ15465 462 aa19.58■□□□□ 0.72
MTA1-216ENST00000498644 QRICH1Q2TAL8 776 aa19.58■□□□□ 0.72
MTA1-216ENST00000498644 FBXO11Q86XK2 927 aa19.58■□□□□ 0.72
MTA1-216ENST00000498644 MCF2L2Q86YR7 1114 aa19.58■□□□□ 0.72
MTA1-216ENST00000498644 NCOA7Q8NI08 942 aa19.58■□□□□ 0.72
MTA1-216ENST00000498644 ERICH2A1L162 156 aa19.57■□□□□ 0.72
MTA1-216ENST00000498644 KLRF2D3W0D1 207 aa19.57■□□□□ 0.72
MTA1-216ENST00000498644 E7EWF7 191 aa19.57■□□□□ 0.72
MTA1-216ENST00000498644 DHX16O60231 1041 aaKnown RBP19.57■□□□□ 0.72
MTA1-216ENST00000498644 TIMP1P01033 207 aa19.57■□□□□ 0.72
MTA1-216ENST00000498644 CXCL17Q6UXB2 119 aa19.57■□□□□ 0.72
MTA1-216ENST00000498644 RALYLQ86SE5 291 aaKnown RBP19.57■□□□□ 0.72
MTA1-216ENST00000498644 STAG2Q8N3U4 1231 aa19.57■□□□□ 0.72
MTA1-216ENST00000498644 DEFB123Q8N688 67 aa19.57■□□□□ 0.72
MTA1-216ENST00000498644 SLC43A3Q8NBI5 491 aa19.57■□□□□ 0.72
MTA1-216ENST00000498644 VAT1LQ9HCJ6 419 aa19.57■□□□□ 0.72
MTA1-216ENST00000498644 TBX21Q9UL17 535 aa19.57■□□□□ 0.72
MTA1-216ENST00000498644 MRPL11Q9Y3B7 192 aaKnown RBP19.57■□□□□ 0.72
MTA1-216ENST00000498644 PALM3A6NDB9 673 aaPredicted RBP19.56■□□□□ 0.72
MTA1-216ENST00000498644 IFIT3O14879 490 aaKnown RBP19.56■□□□□ 0.72
MTA1-216ENST00000498644 TLR3O15455 904 aaKnown RBP19.56■□□□□ 0.72
MTA1-216ENST00000498644 SART3Q15020 963 aaKnown RBP19.56■□□□□ 0.72
MTA1-216ENST00000498644 C9orf50Q5SZB4 431 aa19.56■□□□□ 0.72
MTA1-216ENST00000498644 TMEM63BQ5T3F8 832 aa19.56■□□□□ 0.72
MTA1-216ENST00000498644 FAM109BQ6ICB4 259 aaPredicted RBP19.56■□□□□ 0.72
MTA1-216ENST00000498644 FAM126BQ8IXS8 530 aa19.56■□□□□ 0.72
MTA1-216ENST00000498644 MAD2L2Q9UI95 211 aa19.56■□□□□ 0.72
MTA1-216ENST00000498644 NKRFO15226 690 aaKnown RBP eCLIP19.55■□□□□ 0.728e-7■■■■□ 22.5
MTA1-216ENST00000498644 PTGS1P23219 599 aa19.55■□□□□ 0.72
MTA1-216ENST00000498644 FPGSQ05932 587 aa19.55■□□□□ 0.72
MTA1-216ENST00000498644 ITGA7Q13683 1181 aa19.55■□□□□ 0.72
MTA1-216ENST00000498644 NSUN6Q8TEA1 469 aaKnown RBP19.55■□□□□ 0.72
MTA1-216ENST00000498644 SCFD2Q8WU76 684 aa19.55■□□□□ 0.72
MTA1-216ENST00000498644 TBC1D5Q92609 795 aa19.55■□□□□ 0.72
MTA1-216ENST00000498644 MTMR8Q96EF0 704 aa19.55■□□□□ 0.72
MTA1-216ENST00000498644 AMNQ9BXJ7 453 aa19.55■□□□□ 0.72
MTA1-216ENST00000498644 RBM8AQ9Y5S9 174 aaKnown RBP19.55■□□□□ 0.72
MTA1-216ENST00000498644 CD4P01730 458 aa19.54■□□□□ 0.72
MTA1-216ENST00000498644 CPT1AP50416 773 aa19.54■□□□□ 0.72
MTA1-216ENST00000498644 WTAPQ15007 396 aa19.54■□□□□ 0.72
MTA1-216ENST00000498644 STOX1Q6ZVD7 989 aa19.54■□□□□ 0.72
MTA1-216ENST00000498644 SYTL5Q8TDW5 730 aaPredicted RBP19.54■□□□□ 0.72
MTA1-216ENST00000498644 IWS1Q96ST2 819 aa19.54■□□□□ 0.72
MTA1-216ENST00000498644 POLR3EQ9NVU0 708 aa19.54■□□□□ 0.72
MTA1-216ENST00000498644 TAF6LQ9Y6J9 622 aa19.54■□□□□ 0.72
MTA1-216ENST00000498644 ZBTB5O15062 677 aa19.53■□□□□ 0.72
MTA1-216ENST00000498644 TRAF1Q13077 416 aa19.53■□□□□ 0.72
MTA1-216ENST00000498644 GRM4Q14833 912 aa19.53■□□□□ 0.72
MTA1-216ENST00000498644 PPP2R5BQ15173 497 aa19.53■□□□□ 0.72
MTA1-216ENST00000498644 BRDTQ58F21 947 aaPredicted RBP19.53■□□□□ 0.72
MTA1-216ENST00000498644 MFSD5Q6N075 450 aa19.53■□□□□ 0.72
MTA1-216ENST00000498644 Q7L0L9 218 aa19.53■□□□□ 0.72
MTA1-216ENST00000498644 CENPQQ7L2Z9 268 aaPredicted RBP19.53■□□□□ 0.72
MTA1-216ENST00000498644 TAAR1Q96RJ0 339 aa19.53■□□□□ 0.72
MTA1-216ENST00000498644 RMDN3Q96TC7 470 aa19.53■□□□□ 0.72
MTA1-216ENST00000498644 MTMR10Q9NXD2 777 aa19.53■□□□□ 0.72
MTA1-216ENST00000498644 MAP3K20Q9NYL2 800 aaKnown RBP19.53■□□□□ 0.72
MTA1-216ENST00000498644 GRIN2DO15399 1336 aa19.52■□□□□ 0.72
MTA1-216ENST00000498644 COL6A3P12111 3177 aa19.52■□□□□ 0.72
MTA1-216ENST00000498644 EPHB4P54760 987 aa19.52■□□□□ 0.72
MTA1-216ENST00000498644 TROAPQ12815 778 aa19.52■□□□□ 0.72
MTA1-216ENST00000498644 TTLL4Q14679 1199 aa19.52■□□□□ 0.72
MTA1-216ENST00000498644 TMEM67Q5HYA8 995 aa19.52■□□□□ 0.72
MTA1-216ENST00000498644 MB21D2Q8IYB1 491 aaPredicted RBP19.52■□□□□ 0.72
MTA1-216ENST00000498644 SAMD3Q8N6K7 520 aa19.52■□□□□ 0.72
MTA1-216ENST00000498644 OR6J1Q8NGC5 347 aa19.52■□□□□ 0.72
MTA1-216ENST00000498644 IGDCC4Q8TDY8 1250 aa19.52■□□□□ 0.72
MTA1-216ENST00000498644 MTA3Q9BTC8 594 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms