RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 PQBP1O60828 265 aaKnown RBP18.79■□□□□ 0.6
NR1H3-227ENST00000498548 COL9A3Q14050 684 aaPredicted RBP18.79■□□□□ 0.6
NR1H3-227ENST00000498548 WTAPQ15007 396 aa18.79■□□□□ 0.6
NR1H3-227ENST00000498548 C1orf53Q5VUE5 145 aa18.79■□□□□ 0.6
NR1H3-227ENST00000498548 IQSEC1Q6DN90 963 aa18.79■□□□□ 0.6
NR1H3-227ENST00000498548 FBXO11Q86XK2 927 aa18.79■□□□□ 0.6
NR1H3-227ENST00000498548 MB21D2Q8IYB1 491 aaPredicted RBP18.79■□□□□ 0.6
NR1H3-227ENST00000498548 TRIM43Q96BQ3 446 aaPredicted RBP18.79■□□□□ 0.6
NR1H3-227ENST00000498548 GPHNQ9NQX3 736 aaPredicted RBP18.79■□□□□ 0.6
NR1H3-227ENST00000498548 PDLIM7Q9NR12 457 aa18.79■□□□□ 0.6
NR1H3-227ENST00000498548 PNMA2Q9UL42 364 aa18.79■□□□□ 0.6
NR1H3-227ENST00000498548 BAZ2BQ9UIF8 2168 aaKnown RBP18.79■□□□□ 0.6
NR1H3-227ENST00000498548 PALM3A6NDB9 673 aaPredicted RBP18.78■□□□□ 0.6
NR1H3-227ENST00000498548 CST5P28325 142 aaPredicted RBP18.78■□□□□ 0.6
NR1H3-227ENST00000498548 SLC35G1Q2M3R5 365 aa18.78■□□□□ 0.6
NR1H3-227ENST00000498548 TMEM67Q5HYA8 995 aa18.78■□□□□ 0.6
NR1H3-227ENST00000498548 TLK2Q86UE8 772 aa18.78■□□□□ 0.6
NR1H3-227ENST00000498548 PCSK9Q8NBP7 692 aaKnown RBP18.78■□□□□ 0.6
NR1H3-227ENST00000498548 NUP133Q8WUM0 1156 aa18.78■□□□□ 0.6
NR1H3-227ENST00000498548 BADQ92934 168 aa18.78■□□□□ 0.6
NR1H3-227ENST00000498548 TAAR1Q96RJ0 339 aa18.78■□□□□ 0.6
NR1H3-227ENST00000498548 AP5M1Q9H0R1 490 aa18.78■□□□□ 0.6
NR1H3-227ENST00000498548 VTA1Q9NP79 307 aa18.78■□□□□ 0.6
NR1H3-227ENST00000498548 LTBP2Q14767 1821 aa18.78■□□□□ 0.6
NR1H3-227ENST00000498548 ABCB11O95342 1321 aa18.77■□□□□ 0.6
NR1H3-227ENST00000498548 SLC27A2O14975 620 aa18.77■□□□□ 0.6
NR1H3-227ENST00000498548 GRM4Q14833 912 aa18.77■□□□□ 0.6
NR1H3-227ENST00000498548 BMP2KLQ5H9B9 411 aa18.77■□□□□ 0.6
NR1H3-227ENST00000498548 TDHQ8IZJ6 230 aa18.77■□□□□ 0.6
NR1H3-227ENST00000498548 IGDCC4Q8TDY8 1250 aa18.77■□□□□ 0.6
NR1H3-227ENST00000498548 GLT1D1Q96MS3 346 aa18.77■□□□□ 0.6
NR1H3-227ENST00000498548 ANO2Q9NQ90 1003 aa18.77■□□□□ 0.6
NR1H3-227ENST00000498548 PPP1R11O60927 126 aaPredicted RBP18.76■□□□□ 0.59
NR1H3-227ENST00000498548 CLTBP09497 229 aa18.76■□□□□ 0.59
NR1H3-227ENST00000498548 ITGB8P26012 769 aa18.76■□□□□ 0.59
NR1H3-227ENST00000498548 PDE4DQ08499 809 aa18.76■□□□□ 0.59
NR1H3-227ENST00000498548 CREB3L3Q68CJ9 461 aa18.76■□□□□ 0.59
NR1H3-227ENST00000498548 CXCL17Q6UXB2 119 aa18.76■□□□□ 0.59
NR1H3-227ENST00000498548 HOMER1Q86YM7 354 aa18.76■□□□□ 0.59
NR1H3-227ENST00000498548 SYTL5Q8TDW5 730 aaPredicted RBP18.76■□□□□ 0.59
NR1H3-227ENST00000498548 CCDC136Q96JN2 1154 aa18.76■□□□□ 0.59
NR1H3-227ENST00000498548 WDR11Q9BZH6 1224 aa18.76■□□□□ 0.59
NR1H3-227ENST00000498548 COL20A1Q9P218 1284 aa18.76■□□□□ 0.59
NR1H3-227ENST00000498548 MRPL11Q9Y3B7 192 aaKnown RBP18.76■□□□□ 0.59
NR1H3-227ENST00000498548 NKX3-2P78367 333 aa18.75■□□□□ 0.59
NR1H3-227ENST00000498548 FAAP100Q0VG06 881 aa18.75■□□□□ 0.59
NR1H3-227ENST00000498548 SART3Q15020 963 aaKnown RBP18.75■□□□□ 0.59
NR1H3-227ENST00000498548 NECTIN1Q15223 517 aa18.75■□□□□ 0.59
NR1H3-227ENST00000498548 FSCN1Q16658 493 aaKnown RBP18.75■□□□□ 0.59
NR1H3-227ENST00000498548 RGS22Q8NE09 1264 aa18.75■□□□□ 0.59
NR1H3-227ENST00000498548 PIBF1Q8WXW3 757 aa18.75■□□□□ 0.59
NR1H3-227ENST00000498548 MTMR8Q96EF0 704 aa18.75■□□□□ 0.59
NR1H3-227ENST00000498548 PIGSQ96S52 555 aa18.75■□□□□ 0.59
NR1H3-227ENST00000498548 MYL10Q9BUA6 226 aa18.75■□□□□ 0.59
NR1H3-227ENST00000498548 TMEM39AQ9NV64 488 aa18.75■□□□□ 0.59
NR1H3-227ENST00000498548 RANBP2P49792 3224 aaKnown RBP18.75■□□□□ 0.59
NR1H3-227ENST00000498548 PRC1O43663 620 aa18.74■□□□□ 0.59
NR1H3-227ENST00000498548 CYTH3O43739 400 aa18.74■□□□□ 0.59
NR1H3-227ENST00000498548 CFBP00751 764 aa18.74■□□□□ 0.59
NR1H3-227ENST00000498548 CDK7P50613 346 aa18.74■□□□□ 0.59
NR1H3-227ENST00000498548 TROAPQ12815 778 aa18.74■□□□□ 0.59
NR1H3-227ENST00000498548 CATIPQ7Z7H3 387 aa18.74■□□□□ 0.59
NR1H3-227ENST00000498548 DNERQ8NFT8 737 aa18.74■□□□□ 0.59
NR1H3-227ENST00000498548 COPS5Q92905 334 aa18.74■□□□□ 0.59
NR1H3-227ENST00000498548 AMNQ9BXJ7 453 aa18.74■□□□□ 0.59
NR1H3-227ENST00000498548 LRRC2Q9BYS8 371 aa18.74■□□□□ 0.59
NR1H3-227ENST00000498548 LY9Q9HBG7 655 aa18.74■□□□□ 0.59
NR1H3-227ENST00000498548 ELP1O95163 1332 aa18.74■□□□□ 0.59
NR1H3-227ENST00000498548 A0A0U1RQG5 324 aaPredicted RBP18.73■□□□□ 0.59
NR1H3-227ENST00000498548 RBM47A0AV96 593 aaKnown RBP18.73■□□□□ 0.59
NR1H3-227ENST00000498548 DCDC2CA8MYV0 355 aa18.73■□□□□ 0.59
NR1H3-227ENST00000498548 ARVCFO00192 962 aa18.73■□□□□ 0.59
NR1H3-227ENST00000498548 OPLAHO14841 1288 aa18.73■□□□□ 0.59
NR1H3-227ENST00000498548 ZBTB5O15062 677 aa18.73■□□□□ 0.59
NR1H3-227ENST00000498548 EDNRBP24530 442 aa18.73■□□□□ 0.59
NR1H3-227ENST00000498548 DUSP28Q4G0W2 176 aa18.73■□□□□ 0.59
NR1H3-227ENST00000498548 CASC1Q6TDU7 716 aa18.73■□□□□ 0.59
NR1H3-227ENST00000498548 ANKRD33Q7Z3H0 272 aa18.73■□□□□ 0.59
NR1H3-227ENST00000498548 MCF2L2Q86YR7 1114 aa18.73■□□□□ 0.59
NR1H3-227ENST00000498548 RIOX1Q9H6W3 641 aa18.73■□□□□ 0.59
NR1H3-227ENST00000498548 Q9Y3F1 56 aa18.73■□□□□ 0.59
NR1H3-227ENST00000498548 LOC102724159A0A0B4J2E5 919 aa18.72■□□□□ 0.59
NR1H3-227ENST00000498548 PSMC6P62333 389 aa18.72■□□□□ 0.59
NR1H3-227ENST00000498548 PWP2Q15269 919 aaKnown RBP18.72■□□□□ 0.59
NR1H3-227ENST00000498548 RAB11FIP4Q86YS3 637 aa18.72■□□□□ 0.59
NR1H3-227ENST00000498548 OR6J1Q8NGC5 347 aa18.72■□□□□ 0.59
NR1H3-227ENST00000498548 TOX2Q96NM4 488 aa18.72■□□□□ 0.59
NR1H3-227ENST00000498548 MPHOSPH6Q99547 160 aaKnown RBP18.72■□□□□ 0.59
NR1H3-227ENST00000498548 PCDHA1Q9Y5I3 950 aa18.72■□□□□ 0.59
NR1H3-227ENST00000498548 SH2B2O14492 632 aaPredicted RBP18.71■□□□□ 0.59
NR1H3-227ENST00000498548 KIAA0355O15063 1070 aa18.71■□□□□ 0.59
NR1H3-227ENST00000498548 ZEB2O60315 1214 aa18.71■□□□□ 0.59
NR1H3-227ENST00000498548 ARIH2O95376 493 aa18.71■□□□□ 0.59
NR1H3-227ENST00000498548 RAG1P15918 1043 aa18.71■□□□□ 0.59
NR1H3-227ENST00000498548 EIF2AK2P19525 551 aaKnown RBP18.71■□□□□ 0.59
NR1H3-227ENST00000498548 RXRAP19793 462 aa18.71■□□□□ 0.59
NR1H3-227ENST00000498548 MCM5P33992 734 aa18.71■□□□□ 0.59
NR1H3-227ENST00000498548 SHHQ15465 462 aa18.71■□□□□ 0.59
NR1H3-227ENST00000498548 LRIT3Q3SXY7 679 aa18.71■□□□□ 0.59
NR1H3-227ENST00000498548 C9orf50Q5SZB4 431 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms