RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 GPCPD1Q9NPB8 672 aa14.17□□□□□ -0.14
CNOT4-211ENST00000498534 TCP11L1Q9NUJ3 509 aa14.17□□□□□ -0.14
CNOT4-211ENST00000498534 MSRAQ9UJ68 235 aa14.17□□□□□ -0.14
CNOT4-211ENST00000498534 PTPDC1A2A3K4 754 aa14.16□□□□□ -0.14
CNOT4-211ENST00000498534 HSPD1P10809 573 aaKnown RBP14.16□□□□□ -0.14
CNOT4-211ENST00000498534 CD44P16070 742 aaKnown RBP14.16□□□□□ -0.14
CNOT4-211ENST00000498534 MFAP1P55081 439 aaKnown RBP14.16□□□□□ -0.14
CNOT4-211ENST00000498534 RRP1P56182 461 aaKnown RBP14.16□□□□□ -0.14
CNOT4-211ENST00000498534 DUSP28Q4G0W2 176 aa14.16□□□□□ -0.14
CNOT4-211ENST00000498534 RASIP1Q5U651 963 aa14.16□□□□□ -0.14
CNOT4-211ENST00000498534 MFSD6Q6ZSS7 791 aa14.16□□□□□ -0.14
CNOT4-211ENST00000498534 MORC4Q8TE76 937 aa14.16□□□□□ -0.14
CNOT4-211ENST00000498534 GAS2L1Q99501 681 aaPredicted RBP14.16□□□□□ -0.14
CNOT4-211ENST00000498534 WDR11Q9BZH6 1224 aa14.16□□□□□ -0.14
CNOT4-211ENST00000498534 GPHNQ9NQX3 736 aaPredicted RBP14.16□□□□□ -0.14
CNOT4-211ENST00000498534 EYSQ5T1H1 3165 aa14.16□□□□□ -0.14
CNOT4-211ENST00000498534 PRUNE2Q8WUY3 3088 aa14.16□□□□□ -0.14
CNOT4-211ENST00000498534 CDH23Q9H251 3354 aa14.16□□□□□ -0.14
CNOT4-211ENST00000498534 GRXCR1A8MXD5 290 aa14.15□□□□□ -0.14
CNOT4-211ENST00000498534 TRIM6-TRIM34B2RNG4 842 aa14.15□□□□□ -0.14
CNOT4-211ENST00000498534 B4DLN1 442 aa14.15□□□□□ -0.14
CNOT4-211ENST00000498534 SUPT20HL2P0C7V6 817 aa14.15□□□□□ -0.14
CNOT4-211ENST00000498534 PCP11498 1178 aaKnown RBP14.15□□□□□ -0.14
CNOT4-211ENST00000498534 MRPL12P52815 198 aaKnown RBP14.15□□□□□ -0.14
CNOT4-211ENST00000498534 HDAC1Q13547 482 aaPredicted RBP14.15□□□□□ -0.14
CNOT4-211ENST00000498534 RAB30Q15771 203 aa14.15□□□□□ -0.14
CNOT4-211ENST00000498534 BRDTQ58F21 947 aaPredicted RBP14.15□□□□□ -0.14
CNOT4-211ENST00000498534 RASGRP2Q7LDG7 609 aa14.15□□□□□ -0.14
CNOT4-211ENST00000498534 HERVK_113Q902F9 699 aa14.15□□□□□ -0.14
CNOT4-211ENST00000498534 FAM227BQ96M60 508 aa14.15□□□□□ -0.14
CNOT4-211ENST00000498534 PURBQ96QR8 312 aaKnown RBP14.15□□□□□ -0.14
CNOT4-211ENST00000498534 CRBNQ96SW2 442 aa14.15□□□□□ -0.14
CNOT4-211ENST00000498534 PBX4Q9BYU1 374 aa14.15□□□□□ -0.14
CNOT4-211ENST00000498534 TRPV6Q9H1D0 765 aa14.15□□□□□ -0.14
CNOT4-211ENST00000498534 POLR3EQ9NVU0 708 aa14.15□□□□□ -0.14
CNOT4-211ENST00000498534 DDX49Q9Y6V7 483 aaKnown RBP14.15□□□□□ -0.14
CNOT4-211ENST00000498534 GRIN2DO15399 1336 aa14.15□□□□□ -0.15
CNOT4-211ENST00000498534 FRMPD2Q68DX3 1309 aaPredicted RBP14.15□□□□□ -0.15
CNOT4-211ENST00000498534 A0A0D9SFI3 127 aa14.14□□□□□ -0.15
CNOT4-211ENST00000498534 CALML3P27482 149 aa14.14□□□□□ -0.15
CNOT4-211ENST00000498534 PBX2P40425 430 aa14.14□□□□□ -0.15
CNOT4-211ENST00000498534 CPT1AP50416 773 aa14.14□□□□□ -0.15
CNOT4-211ENST00000498534 ALDH5A1P51649 535 aaPredicted RBP14.14□□□□□ -0.15
CNOT4-211ENST00000498534 CCL23P55773 120 aa14.14□□□□□ -0.15
CNOT4-211ENST00000498534 PSMC6P62333 389 aa14.14□□□□□ -0.15
CNOT4-211ENST00000498534 PDE4DQ08499 809 aa14.14□□□□□ -0.15
CNOT4-211ENST00000498534 AKNAD1Q5T1N1 836 aa14.14□□□□□ -0.15
CNOT4-211ENST00000498534 RNF207Q6ZRF8 634 aa14.14□□□□□ -0.15
CNOT4-211ENST00000498534 RILPL2Q969X0 211 aa14.14□□□□□ -0.15
CNOT4-211ENST00000498534 RNF41Q9H4P4 317 aaPredicted RBP14.14□□□□□ -0.15
CNOT4-211ENST00000498534 MYO9BQ13459 2157 aa14.14□□□□□ -0.15
CNOT4-211ENST00000498534 VCANP13611 3396 aa14.13□□□□□ -0.15
CNOT4-211ENST00000498534 NFIBO00712 420 aa14.13□□□□□ -0.15
CNOT4-211ENST00000498534 B4GALT4O60513 344 aa14.13□□□□□ -0.15
CNOT4-211ENST00000498534 KPNA6O60684 536 aa14.13□□□□□ -0.15
CNOT4-211ENST00000498534 PDHBP11177 359 aa14.13□□□□□ -0.15
CNOT4-211ENST00000498534 PTGS1P23219 599 aa14.13□□□□□ -0.15
CNOT4-211ENST00000498534 HAND2P61296 217 aa14.13□□□□□ -0.15
CNOT4-211ENST00000498534 NMIQ13287 307 aaPredicted RBP14.13□□□□□ -0.15
CNOT4-211ENST00000498534 AAMPQ13685 434 aa14.13□□□□□ -0.15
CNOT4-211ENST00000498534 TMEM63BQ5T3F8 832 aa14.13□□□□□ -0.15
CNOT4-211ENST00000498534 OTOP2Q7RTS6 562 aa14.13□□□□□ -0.15
CNOT4-211ENST00000498534 ESR2Q92731 530 aa14.13□□□□□ -0.15
CNOT4-211ENST00000498534 NOC4LQ9BVI4 516 aaKnown RBP14.13□□□□□ -0.15
CNOT4-211ENST00000498534 SLC28A3Q9HAS3 691 aa14.13□□□□□ -0.15
CNOT4-211ENST00000498534 ZMYM6O95789 1325 aa14.13□□□□□ -0.15
CNOT4-211ENST00000498534 RAD50Q92878 1312 aa14.13□□□□□ -0.15
CNOT4-211ENST00000498534 RBM47A0AV96 593 aaKnown RBP14.12□□□□□ -0.15
CNOT4-211ENST00000498534 ZNF213O14771 459 aa14.12□□□□□ -0.15
CNOT4-211ENST00000498534 NKRFO15226 690 aaKnown RBP eCLIP14.12□□□□□ -0.15
CNOT4-211ENST00000498534 MYL3P08590 195 aa14.12□□□□□ -0.15
CNOT4-211ENST00000498534 ZNF543Q08ER8 600 aa14.12□□□□□ -0.15
CNOT4-211ENST00000498534 CCDC178Q5BJE1 867 aa14.12□□□□□ -0.15
CNOT4-211ENST00000498534 GPATCH4Q5T3I0 446 aaKnown RBP14.12□□□□□ -0.15
CNOT4-211ENST00000498534 DNERQ8NFT8 737 aa14.12□□□□□ -0.15
CNOT4-211ENST00000498534 OR6J1Q8NGC5 347 aa14.12□□□□□ -0.15
CNOT4-211ENST00000498534 CLEC4DQ8WXI8 215 aa14.12□□□□□ -0.15
CNOT4-211ENST00000498534 PPM1EQ8WY54 764 aa14.12□□□□□ -0.15
CNOT4-211ENST00000498534 MTG1Q9BT17 334 aaPredicted RBP14.12□□□□□ -0.15
CNOT4-211ENST00000498534 LNPKQ9C0E8 428 aa14.12□□□□□ -0.15
CNOT4-211ENST00000498534 ALDH8A1Q9H2A2 487 aaPredicted RBP14.12□□□□□ -0.15
CNOT4-211ENST00000498534 RWDD1Q9H446 243 aaPredicted RBP14.12□□□□□ -0.15
CNOT4-211ENST00000498534 PRDM12Q9H4Q4 367 aa14.12□□□□□ -0.15
CNOT4-211ENST00000498534 CXXC1Q9P0U4 656 aaPredicted RBP14.12□□□□□ -0.15
CNOT4-211ENST00000498534 SLC4A7Q9Y6M7 1214 aa14.12□□□□□ -0.15
CNOT4-211ENST00000498534 UMODL1Q5DID0 1318 aa14.12□□□□□ -0.15
CNOT4-211ENST00000498534 CCDC171Q6TFL3 1326 aa14.12□□□□□ -0.15
CNOT4-211ENST00000498534 NT5C2P49902 561 aa14.11□□□□□ -0.15
CNOT4-211ENST00000498534 RPS6P62753 249 aaKnown RBP14.11□□□□□ -0.15
CNOT4-211ENST00000498534 PURAQ00577 322 aaKnown RBP14.11□□□□□ -0.15
CNOT4-211ENST00000498534 PPP2R5BQ15173 497 aa14.11□□□□□ -0.15
CNOT4-211ENST00000498534 ZNF589Q86UQ0 364 aaPredicted RBP14.11□□□□□ -0.15
CNOT4-211ENST00000498534 DGKHQ86XP1 1220 aa14.11□□□□□ -0.15
CNOT4-211ENST00000498534 SCFD2Q8WU76 684 aa14.11□□□□□ -0.15
CNOT4-211ENST00000498534 WDR19Q8NEZ3 1342 aa14.11□□□□□ -0.15
CNOT4-211ENST00000498534 ZBBXA8MT70 800 aa14.1□□□□□ -0.15
CNOT4-211ENST00000498534 PFKMP08237 780 aa14.1□□□□□ -0.15
CNOT4-211ENST00000498534 SNHG28P0DPA3 235 aa14.1□□□□□ -0.15
CNOT4-211ENST00000498534 SDSP20132 328 aa14.1□□□□□ -0.15
CNOT4-211ENST00000498534 IGFBP4P22692 258 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms