RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 RRP36Q96EU6 259 aaKnown RBP14.84□□□□□ -0.03
HSPG2-213ENST00000498495 SENP6Q9GZR1 1112 aaPredicted RBP14.84□□□□□ -0.03
HSPG2-213ENST00000498495 XPNPEP3Q9NQH7 507 aa14.84□□□□□ -0.03
HSPG2-213ENST00000498495 KBTBD13C9JR72 458 aa14.83□□□□□ -0.04
HSPG2-213ENST00000498495 ZBTB43O43298 467 aa14.83□□□□□ -0.04
HSPG2-213ENST00000498495 EVI5O60447 810 aa14.83□□□□□ -0.04
HSPG2-213ENST00000498495 EIF5BO60841 1220 aaKnown RBP14.83□□□□□ -0.04
HSPG2-213ENST00000498495 PPP1R11O60927 126 aaPredicted RBP14.83□□□□□ -0.04
HSPG2-213ENST00000498495 DUSP11O75319 330 aaKnown RBP14.83□□□□□ -0.04
HSPG2-213ENST00000498495 CFBP00751 764 aa14.83□□□□□ -0.04
HSPG2-213ENST00000498495 Q6ZUG5 572 aa14.83□□□□□ -0.04
HSPG2-213ENST00000498495 NOL8Q76FK4 1167 aaKnown RBP14.83□□□□□ -0.04
HSPG2-213ENST00000498495 RNF180Q86T96 592 aa14.83□□□□□ -0.04
HSPG2-213ENST00000498495 MICU3Q86XE3 530 aa14.83□□□□□ -0.04
HSPG2-213ENST00000498495 CMTR1Q8N1G2 835 aaKnown RBP14.83□□□□□ -0.04
HSPG2-213ENST00000498495 CCDC82Q8N4S0 544 aa14.83□□□□□ -0.04
HSPG2-213ENST00000498495 SRBD1Q8N5C6 995 aaKnown RBP14.83□□□□□ -0.04
HSPG2-213ENST00000498495 SPZ1Q9BXG8 430 aa14.83□□□□□ -0.04
HSPG2-213ENST00000498495 MAP3K20Q9NYL2 800 aaKnown RBP14.83□□□□□ -0.04
HSPG2-213ENST00000498495 SEC63Q9UGP8 760 aaKnown RBP14.83□□□□□ -0.04
HSPG2-213ENST00000498495 BRPF3Q9ULD4 1205 aa14.83□□□□□ -0.04
HSPG2-213ENST00000498495 NAP1L2Q9ULW6 460 aaPredicted RBP14.83□□□□□ -0.04
HSPG2-213ENST00000498495 NR2E3Q9Y5X4 410 aa14.83□□□□□ -0.04
HSPG2-213ENST00000498495 ASTN1O14525 1302 aa14.83□□□□□ -0.04
HSPG2-213ENST00000498495 KLF18A0A0U1RQI7 1052 aa14.82□□□□□ -0.04
HSPG2-213ENST00000498495 PLEKHA8P1O95397 391 aa14.82□□□□□ -0.04
HSPG2-213ENST00000498495 PGK1P00558 417 aa14.82□□□□□ -0.04
HSPG2-213ENST00000498495 COL6A1P12109 1028 aa14.82□□□□□ -0.04
HSPG2-213ENST00000498495 CASTP20810 708 aaKnown RBP14.82□□□□□ -0.04
HSPG2-213ENST00000498495 RPS6KB1P23443 525 aa14.82□□□□□ -0.04
HSPG2-213ENST00000498495 TNFAIP2Q03169 654 aa14.82□□□□□ -0.04
HSPG2-213ENST00000498495 PDE4DQ08499 809 aa14.82□□□□□ -0.04
HSPG2-213ENST00000498495 LRRC41Q15345 812 aa14.82□□□□□ -0.04
HSPG2-213ENST00000498495 PRPF38BQ5VTL8 546 aaKnown RBP14.82□□□□□ -0.04
HSPG2-213ENST00000498495 IQSEC1Q6DN90 963 aa14.82□□□□□ -0.04
HSPG2-213ENST00000498495 APOA5Q6Q788 366 aa14.82□□□□□ -0.04
HSPG2-213ENST00000498495 SAMD3Q8N6K7 520 aa14.82□□□□□ -0.04
HSPG2-213ENST00000498495 SYTL5Q8TDW5 730 aaPredicted RBP14.82□□□□□ -0.04
HSPG2-213ENST00000498495 MORC4Q8TE76 937 aa14.82□□□□□ -0.04
HSPG2-213ENST00000498495 TAAR1Q96RJ0 339 aa14.82□□□□□ -0.04
HSPG2-213ENST00000498495 KATNBL1Q9H079 304 aa14.82□□□□□ -0.04
HSPG2-213ENST00000498495 SPC25Q9HBM1 224 aa14.82□□□□□ -0.04
HSPG2-213ENST00000498495 VTA1Q9NP79 307 aa14.82□□□□□ -0.04
HSPG2-213ENST00000498495 RBM28Q9NW13 759 aaKnown RBP14.82□□□□□ -0.04
HSPG2-213ENST00000498495 DDX49Q9Y6V7 483 aaKnown RBP14.82□□□□□ -0.04
HSPG2-213ENST00000498495 BRCA2P51587 3418 aa14.82□□□□□ -0.04
HSPG2-213ENST00000498495 ADCYAP1R1P41586 468 aa14.81□□□□□ -0.04
HSPG2-213ENST00000498495 RTN1Q16799 776 aa14.81□□□□□ -0.04
HSPG2-213ENST00000498495 TAPT1Q6NXT6 567 aa14.81□□□□□ -0.04
HSPG2-213ENST00000498495 FBXO16Q8IX29 292 aaPredicted RBP14.81□□□□□ -0.04
HSPG2-213ENST00000498495 NSUN6Q8TEA1 469 aaKnown RBP14.81□□□□□ -0.04
HSPG2-213ENST00000498495 LENG1Q96BZ8 264 aaPredicted RBP14.81□□□□□ -0.04
HSPG2-213ENST00000498495 PDGFCQ9NRA1 345 aa14.81□□□□□ -0.04
HSPG2-213ENST00000498495 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.8□□□□□ -0.04
HSPG2-213ENST00000498495 GOLGA8AA7E2F4 631 aa14.8□□□□□ -0.04
HSPG2-213ENST00000498495 GOLGA8BA8MQT2 603 aa14.8□□□□□ -0.04
HSPG2-213ENST00000498495 GCOM1H8Y6P7 765 aaPredicted RBP14.8□□□□□ -0.04
HSPG2-213ENST00000498495 POLR2MP0CAP2 368 aa14.8□□□□□ -0.04
HSPG2-213ENST00000498495 APOBRQ0VD83 1088 aa14.8□□□□□ -0.04
HSPG2-213ENST00000498495 PPP2R5BQ15173 497 aa14.8□□□□□ -0.04
HSPG2-213ENST00000498495 ARHGEF16Q5VV41 709 aa14.8□□□□□ -0.04
HSPG2-213ENST00000498495 TMTC3Q6ZXV5 915 aa14.8□□□□□ -0.04
HSPG2-213ENST00000498495 RUFY3Q7L099 469 aa14.8□□□□□ -0.04
HSPG2-213ENST00000498495 BRF1Q92994 677 aa14.8□□□□□ -0.04
HSPG2-213ENST00000498495 RMDN3Q96TC7 470 aa14.8□□□□□ -0.04
HSPG2-213ENST00000498495 ZSWIM6Q9HCJ5 1215 aa14.8□□□□□ -0.04
HSPG2-213ENST00000498495 COL20A1Q9P218 1284 aa14.8□□□□□ -0.04
HSPG2-213ENST00000498495 CYP46A1Q9Y6A2 500 aa14.8□□□□□ -0.04
HSPG2-213ENST00000498495 OPLAHO14841 1288 aa14.79□□□□□ -0.04
HSPG2-213ENST00000498495 ADAMTS4O75173 837 aa14.79□□□□□ -0.04
HSPG2-213ENST00000498495 C6orf222P0C671 652 aaPredicted RBP14.79□□□□□ -0.04
HSPG2-213ENST00000498495 MYH6P13533 1939 aa14.79□□□□□ -0.04
HSPG2-213ENST00000498495 SMPD1P17405 629 aa14.79□□□□□ -0.04
HSPG2-213ENST00000498495 HOXA13P31271 388 aaPredicted RBP14.79□□□□□ -0.04
HSPG2-213ENST00000498495 HSD17B4P51659 736 aa14.79□□□□□ -0.04
HSPG2-213ENST00000498495 ATN1P54259 1190 aaPredicted RBP14.79□□□□□ -0.04
HSPG2-213ENST00000498495 GJA9P57773 515 aa14.79□□□□□ -0.04
HSPG2-213ENST00000498495 STXBP2Q15833 593 aa14.79□□□□□ -0.04
HSPG2-213ENST00000498495 FBXL16Q8N461 479 aa14.79□□□□□ -0.04
HSPG2-213ENST00000498495 FERMT2Q96AC1 680 aa14.79□□□□□ -0.04
HSPG2-213ENST00000498495 IWS1Q96ST2 819 aa14.79□□□□□ -0.04
HSPG2-213ENST00000498495 TSEN34Q9BSV6 310 aaKnown RBP14.79□□□□□ -0.04
HSPG2-213ENST00000498495 TM6SF1Q9BZW5 370 aa14.79□□□□□ -0.04
HSPG2-213ENST00000498495 AP5M1Q9H0R1 490 aa14.79□□□□□ -0.04
HSPG2-213ENST00000498495 BAZ2BQ9UIF8 2168 aaKnown RBP14.78□□□□□ -0.04
HSPG2-213ENST00000498495 SYNRGQ9UMZ2 1314 aa14.78□□□□□ -0.04
HSPG2-213ENST00000498495 CCDC196A0A1B0GTZ2 297 aa14.78□□□□□ -0.04
HSPG2-213ENST00000498495 H0YGN5 161 aa14.78□□□□□ -0.04
HSPG2-213ENST00000498495 DYNC1LI2O43237 492 aaPredicted RBP14.78□□□□□ -0.04
HSPG2-213ENST00000498495 ADCY6O43306 1168 aa14.78□□□□□ -0.04
HSPG2-213ENST00000498495 EDNRBP24530 442 aa14.78□□□□□ -0.04
HSPG2-213ENST00000498495 METAP2P50579 478 aaKnown RBP eCLIP14.78□□□□□ -0.04
HSPG2-213ENST00000498495 RCAN1P53805 252 aa14.78□□□□□ -0.04
HSPG2-213ENST00000498495 GHRHRQ02643 423 aa14.78□□□□□ -0.04
HSPG2-213ENST00000498495 KCNA10Q16322 511 aa14.78□□□□□ -0.04
HSPG2-213ENST00000498495 GNASQ5JWF2 1037 aa14.78□□□□□ -0.04
HSPG2-213ENST00000498495 SLC39A5Q6ZMH5 540 aa14.78□□□□□ -0.04
HSPG2-213ENST00000498495 FCHSD1Q86WN1 690 aa14.78□□□□□ -0.04
HSPG2-213ENST00000498495 PCSK9Q8NBP7 692 aaKnown RBP14.78□□□□□ -0.04
HSPG2-213ENST00000498495 KLHDC9Q8NEP7 349 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms