RNA–Protein interactions for RNA: ENST00000498460.1

RNF8-208, Transcript of ring finger protein 8, humanhuman

TSL 3

Gene RNF8, Length 835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-208ENST00000498460 GOLGA8HP0CJ92 632 aa11.6□□□□□ -0.55
RNF8-208ENST00000498460 ALDH5A1P51649 535 aaPredicted RBP11.6□□□□□ -0.55
RNF8-208ENST00000498460 NKX3-2P78367 333 aa11.6□□□□□ -0.55
RNF8-208ENST00000498460 IMMTQ16891 758 aaKnown RBP11.6□□□□□ -0.55
RNF8-208ENST00000498460 GPATCH4Q5T3I0 446 aaKnown RBP11.6□□□□□ -0.55
RNF8-208ENST00000498460 MFSD5Q6N075 450 aa11.6□□□□□ -0.55
RNF8-208ENST00000498460 TAPT1Q6NXT6 567 aa11.6□□□□□ -0.55
RNF8-208ENST00000498460 RNF207Q6ZRF8 634 aa11.6□□□□□ -0.55
RNF8-208ENST00000498460 DGKHQ86XP1 1220 aa11.6□□□□□ -0.55
RNF8-208ENST00000498460 GUCD1Q96NT3 240 aa11.6□□□□□ -0.55
RNF8-208ENST00000498460 MPHOSPH6Q99547 160 aaKnown RBP11.6□□□□□ -0.55
RNF8-208ENST00000498460 PPP1R12CQ9BZL4 782 aa11.6□□□□□ -0.55
RNF8-208ENST00000498460 KAT14Q9H8E8 782 aa11.6□□□□□ -0.55
RNF8-208ENST00000498460 CTNNA3Q9UI47 895 aa11.6□□□□□ -0.55
RNF8-208ENST00000498460 TBX21Q9UL17 535 aa11.6□□□□□ -0.55
RNF8-208ENST00000498460 CHD9Q3L8U1 2897 aa11.6□□□□□ -0.55
RNF8-208ENST00000498460 SCN5AQ14524 2016 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 VCANP13611 3396 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 LOC102724159A0A0B4J2E5 919 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 B4E1Z4 1266 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 SNHG28P0DPA3 235 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 PTGS1P23219 599 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 NT5C2P49902 561 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 PDE4DQ08499 809 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 PPIGQ13427 754 aaKnown RBP eCLIP11.59□□□□□ -0.552e-6■□□□□ 10.1
RNF8-208ENST00000498460 ITGA7Q13683 1181 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 PWP2Q15269 919 aaKnown RBP11.59□□□□□ -0.55
RNF8-208ENST00000498460 USH1GQ495M9 461 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 TMEM63BQ5T3F8 832 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 SLC30A10Q6XR72 485 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 FAM126BQ8IXS8 530 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 TMEM199Q8N511 208 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 PNMA1Q8ND90 353 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 MORC4Q8TE76 937 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 CLEC4DQ8WXI8 215 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 ZSCAN10Q96SZ4 725 aaPredicted RBP11.59□□□□□ -0.55
RNF8-208ENST00000498460 DSCC1Q9BVC3 393 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 WDR11Q9BZH6 1224 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 UBA5Q9GZZ9 404 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 SEMA6BQ9H3T3 888 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 Q9Y3F1 56 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 SUPT16HQ9Y5B9 1047 aaKnown RBP11.59□□□□□ -0.55
RNF8-208ENST00000498460 SCN10AQ9Y5Y9 1956 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 WDR19Q8NEZ3 1342 aa11.59□□□□□ -0.55
RNF8-208ENST00000498460 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.58□□□□□ -0.56
RNF8-208ENST00000498460 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.58□□□□□ -0.56
RNF8-208ENST00000498460 B4DLN1 442 aa11.58□□□□□ -0.56
RNF8-208ENST00000498460 DHX16O60231 1041 aaKnown RBP11.58□□□□□ -0.56
RNF8-208ENST00000498460 CSF2RAP15509 400 aa11.58□□□□□ -0.56
RNF8-208ENST00000498460 MRPL12P52815 198 aaKnown RBP11.58□□□□□ -0.56
RNF8-208ENST00000498460 RPS6P62753 249 aaKnown RBP11.58□□□□□ -0.56
RNF8-208ENST00000498460 DUSP28Q4G0W2 176 aa11.58□□□□□ -0.56
RNF8-208ENST00000498460 CDX2Q99626 313 aaPredicted RBP11.58□□□□□ -0.56
RNF8-208ENST00000498460 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.58□□□□□ -0.569e-7■■■■□ 21.6
RNF8-208ENST00000498460 UBAC1Q9BSL1 405 aa11.58□□□□□ -0.56
RNF8-208ENST00000498460 KRT23Q9C075 422 aa11.58□□□□□ -0.56
RNF8-208ENST00000498460 CPVLQ9H3G5 476 aa11.58□□□□□ -0.56
RNF8-208ENST00000498460 CNNM2Q9H8M5 875 aa11.58□□□□□ -0.56
RNF8-208ENST00000498460 ZSWIM5Q9P217 1185 aa11.58□□□□□ -0.56
RNF8-208ENST00000498460 CD4P01730 458 aa11.57□□□□□ -0.56
RNF8-208ENST00000498460 CYP2C18P33260 490 aa11.57□□□□□ -0.56
RNF8-208ENST00000498460 CPT1AP50416 773 aa11.57□□□□□ -0.56
RNF8-208ENST00000498460 PSMC6P62333 389 aa11.57□□□□□ -0.56
RNF8-208ENST00000498460 BRDTQ58F21 947 aaPredicted RBP11.57□□□□□ -0.56
RNF8-208ENST00000498460 ENAHQ8N8S7 591 aaPredicted RBP11.57□□□□□ -0.56
RNF8-208ENST00000498460 SLC43A3Q8NBI5 491 aa11.57□□□□□ -0.56
RNF8-208ENST00000498460 DNERQ8NFT8 737 aa11.57□□□□□ -0.56
RNF8-208ENST00000498460 SEZ6LQ9BYH1 1024 aa11.57□□□□□ -0.56
RNF8-208ENST00000498460 HIPK3Q9H422 1215 aa11.57□□□□□ -0.56
RNF8-208ENST00000498460 GPHNQ9NQX3 736 aaPredicted RBP11.57□□□□□ -0.56
RNF8-208ENST00000498460 POLR3EQ9NVU0 708 aa11.57□□□□□ -0.56
RNF8-208ENST00000498460 TRANK1O15050 2925 aa11.57□□□□□ -0.56
RNF8-208ENST00000498460 CHD7Q9P2D1 2997 aa11.57□□□□□ -0.56
RNF8-208ENST00000498460 TNKSO95271 1327 aa11.57□□□□□ -0.56
RNF8-208ENST00000498460 MYL3P08590 195 aa11.56□□□□□ -0.56
RNF8-208ENST00000498460 PARP1P09874 1014 aaKnown RBP11.56□□□□□ -0.56
RNF8-208ENST00000498460 ACRP10323 421 aa11.56□□□□□ -0.56
RNF8-208ENST00000498460 PPP2R5BQ15173 497 aa11.56□□□□□ -0.56
RNF8-208ENST00000498460 CDC37Q16543 378 aaPredicted RBP11.56□□□□□ -0.56
RNF8-208ENST00000498460 ASPRV1Q53RT3 343 aa11.56□□□□□ -0.56
RNF8-208ENST00000498460 TMEM240Q5SV17 173 aa11.56□□□□□ -0.56
RNF8-208ENST00000498460 IFIT1BQ5T764 474 aaKnown RBP11.56□□□□□ -0.56
RNF8-208ENST00000498460 PSRC1Q6PGN9 363 aaPredicted RBP11.56□□□□□ -0.56
RNF8-208ENST00000498460 ZNF365Q70YC5 407 aa11.56□□□□□ -0.56
RNF8-208ENST00000498460 ADGRF4Q8IZF3 695 aa11.56□□□□□ -0.56
RNF8-208ENST00000498460 OR6J1Q8NGC5 347 aa11.56□□□□□ -0.56
RNF8-208ENST00000498460 SCFD2Q8WU76 684 aa11.56□□□□□ -0.56
RNF8-208ENST00000498460 ANKS1AQ92625 1134 aa11.56□□□□□ -0.56
RNF8-208ENST00000498460 KAT6AQ92794 2004 aa11.56□□□□□ -0.56
RNF8-208ENST00000498460 TRPV6Q9H1D0 765 aa11.56□□□□□ -0.56
RNF8-208ENST00000498460 TTYH1Q9H313 450 aaPredicted RBP11.56□□□□□ -0.56
RNF8-208ENST00000498460 VAT1LQ9HCJ6 419 aa11.56□□□□□ -0.56
RNF8-208ENST00000498460 GRIN2DO15399 1336 aa11.56□□□□□ -0.56
RNF8-208ENST00000498460 RAD50Q92878 1312 aa11.56□□□□□ -0.56
RNF8-208ENST00000498460 TMEM265A0A087WTH1 108 aa11.55□□□□□ -0.56
RNF8-208ENST00000498460 RBM47A0AV96 593 aaKnown RBP11.55□□□□□ -0.56
RNF8-208ENST00000498460 NKRFO15226 690 aaKnown RBP eCLIP11.55□□□□□ -0.56
RNF8-208ENST00000498460 B4GALT4O60513 344 aa11.55□□□□□ -0.56
RNF8-208ENST00000498460 TXNP10599 105 aaKnown RBP11.55□□□□□ -0.56
RNF8-208ENST00000498460 DNAJB2P25686 324 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms