RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 ABCB5Q2M3G0 1257 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 SV2BQ7L1I2 683 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 VSTM4Q8IW00 320 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 SLC44A5Q8NCS7 719 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 RASGRP4Q8TDF6 673 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 AK8Q96MA6 479 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 PLIN2Q99541 437 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 CUEDC2Q9H467 287 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 MAGEF1Q9HAY2 307 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 BCL9LQ86UU0 1499 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 ANKRD62A6NC57 917 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 TOB1P50616 345 aaPredicted RBP8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 GRIPAP1Q4V328 841 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 ERO1AQ96HE7 468 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 SERPINB13Q9UIV8 391 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 SLIT2O94813 1529 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 FAM237AA0A1B0GTK4 181 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 MYL1P05976 194 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 SREBF2Q12772 1141 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 VPS36Q86VN1 386 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 TBC1D16Q8TBP0 767 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 NELFBQ8WX92 580 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 EFCC1Q9HA90 598 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 NEBLO76041 1014 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 ARID5BQ14865 1188 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 MLXIPQ9HAP2 919 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 LRRC4BQ9NT99 713 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 GPR75-ASB3A0A0A6YYF3 556 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 WTIPA6NIX2 430 aaPredicted RBP8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 RPN1P04843 607 aaKnown RBP8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 TXKP42681 527 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 UBXN1Q04323 297 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 PDE4DQ08499 809 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 GPATCH4Q5T3I0 446 aaKnown RBP8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 CHADLQ6NUI6 762 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 NAA15Q9BXJ9 866 aaKnown RBP8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 GOPCQ9HD26 462 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 ADARB2Q9NS39 739 aaKnown RBP8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 LRWD1Q9UFC0 647 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 KIAA0100Q14667 2235 aaKnown RBP8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 STX10O60499 249 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 CCT6AP40227 531 aaKnown RBP8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 MORC3Q14149 939 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 KARSQ15046 597 aaKnown RBP8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 CNNM4Q6P4Q7 775 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 USP17L2Q6R6M4 530 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 CCDC51Q96ER9 411 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 VPS16Q9H269 839 aa8.92□□□□□ -0.98
HLA-DMB-262ENST00000498020 FAM205CA6NFA0 338 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 FOXN1O15353 648 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 KIAA0754O94854 1291 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 TTLL1O95922 423 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 FGRP09769 529 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 HTRA3P83110 453 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 DGKZQ13574 1117 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 SPA17Q15506 151 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 PKN1Q16512 942 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 CALCRLQ16602 461 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 TAX1BP1Q86VP1 789 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 LRRC47Q8N1G4 583 aaKnown RBP8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 ERMNQ8TAM6 284 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 BARHL2Q9NY43 387 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 MAPK8IP1Q9UQF2 711 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 PRR29P0C7W0 189 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 ETF1P62495 437 aaKnown RBP8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 ENOX2Q16206 610 aaKnown RBP8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 SLC9C1Q4G0N8 1177 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 C15orf52Q6ZUT6 534 aaKnown RBP8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 STAG2Q8N3U4 1231 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 FAM212AQ96EL1 285 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 MXD3Q9BW11 206 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 SPZ1Q9BXG8 430 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 CENPHQ9H3R5 247 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 RGS17Q9UGC6 210 aaPredicted RBP8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 SSR1P43307 286 aaKnown RBP8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 CRKP46108 304 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 BICD1Q96G01 975 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 PIGSQ96S52 555 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 ZNF341Q9BYN7 854 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 SAMSN1Q9NSI8 373 aaKnown RBP8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 LUC7L2Q9Y383 392 aaKnown RBP8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 TCHHQ07283 1943 aa8.91□□□□□ -0.98
HLA-DMB-262ENST00000498020 TESPA1A2RU30 521 aaPredicted RBP8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 DDX39AO00148 427 aaKnown RBP8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 RASA1P20936 1047 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 ATN1P54259 1190 aaPredicted RBP8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 ZNF658Q5TYW1 1059 aaPredicted RBP8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 CACNA2D4Q7Z3S7 1137 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 CHURC1Q8WUH1 139 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 AZI2Q9H6S1 392 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 FRMPD2Q68DX3 1309 aaPredicted RBP8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 GRIN1Q05586 938 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 C16orf86Q6ZW13 317 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 TMTC1Q8IUR5 882 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 CSGALNACT2Q8N6G5 542 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 CEP95Q96GE4 821 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 GBP3Q9H0R5 595 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 DEFB129Q9H1M3 183 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 MYO3BQ8WXR4 1341 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 NID2Q14112 1375 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms