RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 DNERQ8NFT8 737 aa17.83■□□□□ 0.44
NUP50-219ENST00000497960 IGDCC4Q8TDY8 1250 aa17.83■□□□□ 0.44
NUP50-219ENST00000497960 MTA3Q9BTC8 594 aa17.83■□□□□ 0.44
NUP50-219ENST00000497960 AMNQ9BXJ7 453 aa17.83■□□□□ 0.44
NUP50-219ENST00000497960 UPF3AQ9H1J1 476 aaKnown RBP17.83■□□□□ 0.44
NUP50-219ENST00000497960 DDX49Q9Y6V7 483 aaKnown RBP17.83■□□□□ 0.44
NUP50-219ENST00000497960 ADCY6O43306 1168 aa17.82■□□□□ 0.44
NUP50-219ENST00000497960 MCM5P33992 734 aa17.82■□□□□ 0.44
NUP50-219ENST00000497960 BMP8BP34820 402 aa17.82■□□□□ 0.44
NUP50-219ENST00000497960 PDE4DQ08499 809 aa17.82■□□□□ 0.44
NUP50-219ENST00000497960 NECTIN1Q15223 517 aa17.82■□□□□ 0.44
NUP50-219ENST00000497960 GNASQ5JWF2 1037 aa17.82■□□□□ 0.44
NUP50-219ENST00000497960 LBHD1Q9BQE6 289 aaPredicted RBP17.82■□□□□ 0.44
NUP50-219ENST00000497960 AP5M1Q9H0R1 490 aa17.82■□□□□ 0.44
NUP50-219ENST00000497960 SENP2Q9HC62 589 aa17.82■□□□□ 0.44
NUP50-219ENST00000497960 STARD7Q9NQZ5 370 aa17.82■□□□□ 0.44
NUP50-219ENST00000497960 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.81■□□□□ 0.44
NUP50-219ENST00000497960 MYADML2A6NDP7 307 aa17.81■□□□□ 0.44
NUP50-219ENST00000497960 ZBTB5O15062 677 aa17.81■□□□□ 0.44
NUP50-219ENST00000497960 PRC1O43663 620 aa17.81■□□□□ 0.44
NUP50-219ENST00000497960 REC8O95072 547 aa17.81■□□□□ 0.44
NUP50-219ENST00000497960 SMPD1P17405 629 aa17.81■□□□□ 0.44
NUP50-219ENST00000497960 FXR1P51114 621 aaKnown RBP eCLIP17.81■□□□□ 0.44
NUP50-219ENST00000497960 TROAPQ12815 778 aa17.81■□□□□ 0.44
NUP50-219ENST00000497960 TRAF1Q13077 416 aa17.81■□□□□ 0.44
NUP50-219ENST00000497960 CCSAPQ6IQ19 270 aaPredicted RBP17.81■□□□□ 0.44
NUP50-219ENST00000497960 TAPT1Q6NXT6 567 aa17.81■□□□□ 0.44
NUP50-219ENST00000497960 TLK2Q86UE8 772 aa17.81■□□□□ 0.44
NUP50-219ENST00000497960 TMTC2Q8N394 836 aa17.81■□□□□ 0.44
NUP50-219ENST00000497960 VTI1AQ96AJ9 217 aa17.81■□□□□ 0.44
NUP50-219ENST00000497960 TMEM87BQ96K49 555 aa17.81■□□□□ 0.44
NUP50-219ENST00000497960 GLT1D1Q96MS3 346 aa17.81■□□□□ 0.44
NUP50-219ENST00000497960 PDGFCQ9NRA1 345 aa17.81■□□□□ 0.44
NUP50-219ENST00000497960 GNEQ9Y223 722 aaKnown RBP17.81■□□□□ 0.44
NUP50-219ENST00000497960 DYNC1LI2O43237 492 aaPredicted RBP17.8■□□□□ 0.44
NUP50-219ENST00000497960 ZEB2O60315 1214 aa17.8■□□□□ 0.44
NUP50-219ENST00000497960 ASGR1P07306 291 aa17.8■□□□□ 0.44
NUP50-219ENST00000497960 MDM2Q00987 491 aaPredicted RBP17.8■□□□□ 0.44
NUP50-219ENST00000497960 TLE2Q04725 743 aa17.8■□□□□ 0.44
NUP50-219ENST00000497960 NFXL1Q6ZNB6 911 aa17.8■□□□□ 0.44
NUP50-219ENST00000497960 MTMR8Q96EF0 704 aa17.8■□□□□ 0.44
NUP50-219ENST00000497960 UBE2OQ9C0C9 1292 aaKnown RBP17.8■□□□□ 0.44
NUP50-219ENST00000497960 LY9Q9HBG7 655 aa17.8■□□□□ 0.44
NUP50-219ENST00000497960 PRDM5Q9NQX1 630 aaPredicted RBP17.8■□□□□ 0.44
NUP50-219ENST00000497960 Q9Y3F1 56 aa17.8■□□□□ 0.44
NUP50-219ENST00000497960 ELP1O95163 1332 aa17.79■□□□□ 0.44
NUP50-219ENST00000497960 DDAH1O94760 285 aa17.79■□□□□ 0.44
NUP50-219ENST00000497960 KIF5BP33176 963 aa17.79■□□□□ 0.44
NUP50-219ENST00000497960 NKX3-2P78367 333 aa17.79■□□□□ 0.44
NUP50-219ENST00000497960 HOMER1Q86YM7 354 aa17.79■□□□□ 0.44
NUP50-219ENST00000497960 ZNF654Q8IZM8 581 aa17.79■□□□□ 0.44
NUP50-219ENST00000497960 CTCFLQ8NI51 663 aaPredicted RBP17.79■□□□□ 0.44
NUP50-219ENST00000497960 SYTL5Q8TDW5 730 aaPredicted RBP17.79■□□□□ 0.44
NUP50-219ENST00000497960 NSUN6Q8TEA1 469 aaKnown RBP17.79■□□□□ 0.44
NUP50-219ENST00000497960 WDR11Q9BZH6 1224 aa17.79■□□□□ 0.44
NUP50-219ENST00000497960 RIOX1Q9H6W3 641 aa17.79■□□□□ 0.44
NUP50-219ENST00000497960 PCDHA1Q9Y5I3 950 aa17.79■□□□□ 0.44
NUP50-219ENST00000497960 BAZ2BQ9UIF8 2168 aaKnown RBP17.79■□□□□ 0.44
NUP50-219ENST00000497960 CCDC69A6NI79 296 aa17.78■□□□□ 0.44
NUP50-219ENST00000497960 SH2B2O14492 632 aaPredicted RBP17.78■□□□□ 0.44
NUP50-219ENST00000497960 PQBP1O60828 265 aaKnown RBP17.78■□□□□ 0.44
NUP50-219ENST00000497960 EDNRBP24530 442 aa17.78■□□□□ 0.44
NUP50-219ENST00000497960 IRX5P78411 483 aaPredicted RBP17.78■□□□□ 0.44
NUP50-219ENST00000497960 BEX3Q00994 111 aa17.78■□□□□ 0.44
NUP50-219ENST00000497960 FSCN1Q16658 493 aaKnown RBP17.78■□□□□ 0.44
NUP50-219ENST00000497960 DUSP28Q4G0W2 176 aa17.78■□□□□ 0.44
NUP50-219ENST00000497960 TBC1D5Q92609 795 aa17.78■□□□□ 0.44
NUP50-219ENST00000497960 PIGSQ96S52 555 aa17.78■□□□□ 0.44
NUP50-219ENST00000497960 MAP3K14Q99558 947 aa17.78■□□□□ 0.44
NUP50-219ENST00000497960 GPHNQ9NQX3 736 aaPredicted RBP17.78■□□□□ 0.44
NUP50-219ENST00000497960 LCTP09848 1927 aa17.78■□□□□ 0.44
NUP50-219ENST00000497960 MYH6P13533 1939 aa17.78■□□□□ 0.44
NUP50-219ENST00000497960 PNMA6FA0A0J9YX94 578 aa17.77■□□□□ 0.44
NUP50-219ENST00000497960 A0A0U1RQG5 324 aaPredicted RBP17.77■□□□□ 0.44
NUP50-219ENST00000497960 DCDC2CA8MYV0 355 aa17.77■□□□□ 0.44
NUP50-219ENST00000497960 CTAGE5O15320 804 aa17.77■□□□□ 0.44
NUP50-219ENST00000497960 EIF5BO60841 1220 aaKnown RBP17.77■□□□□ 0.44
NUP50-219ENST00000497960 CABYRO75952 493 aa17.77■□□□□ 0.44
NUP50-219ENST00000497960 CFBP00751 764 aa17.77■□□□□ 0.44
NUP50-219ENST00000497960 CLTBP09497 229 aa17.77■□□□□ 0.44
NUP50-219ENST00000497960 LIFRP42702 1097 aa17.77■□□□□ 0.44
NUP50-219ENST00000497960 GNAQP50148 359 aa17.77■□□□□ 0.44
NUP50-219ENST00000497960 SCFD2Q8WU76 684 aa17.77■□□□□ 0.44
NUP50-219ENST00000497960 TOX2Q96NM4 488 aa17.77■□□□□ 0.44
NUP50-219ENST00000497960 TAAR1Q96RJ0 339 aa17.77■□□□□ 0.44
NUP50-219ENST00000497960 RMDN3Q96TC7 470 aa17.77■□□□□ 0.44
NUP50-219ENST00000497960 LZTS2Q9BRK4 669 aa17.77■□□□□ 0.44
NUP50-219ENST00000497960 PDLIM7Q9NR12 457 aa17.77■□□□□ 0.44
NUP50-219ENST00000497960 MROH7Q68CQ1 1323 aa17.76■□□□□ 0.43
NUP50-219ENST00000497960 RBM47A0AV96 593 aaKnown RBP17.76■□□□□ 0.43
NUP50-219ENST00000497960 NKRFO15226 690 aaKnown RBP eCLIP17.76■□□□□ 0.43
NUP50-219ENST00000497960 CYTH3O43739 400 aa17.76■□□□□ 0.43
NUP50-219ENST00000497960 PPP1R11O60927 126 aaPredicted RBP17.76■□□□□ 0.43
NUP50-219ENST00000497960 CALM1P0DP23 149 aa17.76■□□□□ 0.43
NUP50-219ENST00000497960 CALM2P0DP24 149 aa17.76■□□□□ 0.43
NUP50-219ENST00000497960 CALM3P0DP25 149 aa17.76■□□□□ 0.43
NUP50-219ENST00000497960 PPP2R5BQ15173 497 aa17.76■□□□□ 0.43
NUP50-219ENST00000497960 SLC35G1Q2M3R5 365 aa17.76■□□□□ 0.43
NUP50-219ENST00000497960 C8orf34Q49A92 452 aa17.76■□□□□ 0.43
NUP50-219ENST00000497960 ARHGEF16Q5VV41 709 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms