RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 PFKFB3Q16875 520 aaPredicted RBP23.09■■□□□ 1.29
CTSD-206ENST00000497544 PLEKHH3Q7Z736 793 aa23.09■■□□□ 1.29
CTSD-206ENST00000497544 DDX11Q96FC9 970 aa23.09■■□□□ 1.29
CTSD-206ENST00000497544 ACAD9Q9H845 621 aa23.09■■□□□ 1.29
CTSD-206ENST00000497544 PTPDC1A2A3K4 754 aa23.08■■□□□ 1.29
CTSD-206ENST00000497544 STRNO43815 780 aa23.08■■□□□ 1.29
CTSD-206ENST00000497544 DTNBO60941 627 aa23.08■■□□□ 1.29
CTSD-206ENST00000497544 PRMT2P55345 433 aa23.08■■□□□ 1.29
CTSD-206ENST00000497544 PKN1Q16512 942 aa23.08■■□□□ 1.29
CTSD-206ENST00000497544 MUM1L1Q5H9M0 696 aa23.08■■□□□ 1.29
CTSD-206ENST00000497544 GPR142Q7Z601 462 aa23.08■■□□□ 1.29
CTSD-206ENST00000497544 WASF1Q92558 559 aa23.08■■□□□ 1.29
CTSD-206ENST00000497544 GPKOWQ92917 476 aaPredicted RBP eCLIP23.08■■□□□ 1.29
CTSD-206ENST00000497544 GDF15Q99988 308 aa23.08■■□□□ 1.29
CTSD-206ENST00000497544 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.08■■□□□ 1.29
CTSD-206ENST00000497544 STK36Q9NRP7 1315 aa23.08■■□□□ 1.28
CTSD-206ENST00000497544 MGAMO43451 1857 aa23.07■■□□□ 1.28
CTSD-206ENST00000497544 hCG_1984214I3L0E3 225 aa23.07■■□□□ 1.28
CTSD-206ENST00000497544 JAK2O60674 1132 aa23.07■■□□□ 1.28
CTSD-206ENST00000497544 GNRH1P01148 92 aa23.07■■□□□ 1.28
CTSD-206ENST00000497544 FCER1AP12319 257 aa23.07■■□□□ 1.28
CTSD-206ENST00000497544 HOXD10P28358 340 aa23.07■■□□□ 1.28
CTSD-206ENST00000497544 BMP8BP34820 402 aa23.07■■□□□ 1.28
CTSD-206ENST00000497544 KCTD2Q14681 263 aa23.07■■□□□ 1.28
CTSD-206ENST00000497544 MCF2L2Q86YR7 1114 aa23.07■■□□□ 1.28
CTSD-206ENST00000497544 ZNF713Q8N859 430 aaPredicted RBP23.07■■□□□ 1.28
CTSD-206ENST00000497544 MMP19Q99542 508 aa23.07■■□□□ 1.28
CTSD-206ENST00000497544 ZNFX1Q9P2E3 1918 aaKnown RBP23.07■■□□□ 1.28
CTSD-206ENST00000497544 PTPREP23469 700 aa23.06■■□□□ 1.28
CTSD-206ENST00000497544 NAPAP54920 295 aa23.06■■□□□ 1.28
CTSD-206ENST00000497544 HMGN5P82970 282 aaKnown RBP23.06■■□□□ 1.28
CTSD-206ENST00000497544 WWC2Q6AWC2 1192 aa23.06■■□□□ 1.28
CTSD-206ENST00000497544 NSMFQ6X4W1 530 aa23.06■■□□□ 1.28
CTSD-206ENST00000497544 ANKRD35Q8N283 1001 aa23.06■■□□□ 1.28
CTSD-206ENST00000497544 CLEC4DQ8WXI8 215 aa23.06■■□□□ 1.28
CTSD-206ENST00000497544 RNF208Q9H0X6 261 aa23.06■■□□□ 1.28
CTSD-206ENST00000497544 BARHL2Q9NY43 387 aa23.06■■□□□ 1.28
CTSD-206ENST00000497544 CTGFP29279 349 aa23.05■■□□□ 1.28
CTSD-206ENST00000497544 CUL4AQ13619 759 aa23.05■■□□□ 1.28
CTSD-206ENST00000497544 BECN1Q14457 450 aa23.05■■□□□ 1.28
CTSD-206ENST00000497544 LRIT3Q3SXY7 679 aa23.05■■□□□ 1.28
CTSD-206ENST00000497544 FAM184AQ8NB25 1140 aa23.05■■□□□ 1.28
CTSD-206ENST00000497544 SMARCC2Q8TAQ2 1214 aa23.05■■□□□ 1.28
CTSD-206ENST00000497544 CCDC12Q8WUD4 166 aaPredicted RBP23.05■■□□□ 1.28
CTSD-206ENST00000497544 TRIM47Q96LD4 638 aa23.05■■□□□ 1.28
CTSD-206ENST00000497544 SLC15A5A6NIM6 579 aa23.04■■□□□ 1.28
CTSD-206ENST00000497544 STXBP3O00186 592 aa23.04■■□□□ 1.28
CTSD-206ENST00000497544 NFIBO00712 420 aa23.04■■□□□ 1.28
CTSD-206ENST00000497544 FDPSP14324 419 aaKnown RBP23.04■■□□□ 1.28
CTSD-206ENST00000497544 XBP1P17861 261 aa23.04■■□□□ 1.28
CTSD-206ENST00000497544 GRK4P32298 578 aa23.04■■□□□ 1.28
CTSD-206ENST00000497544 ABRAQ8N0Z2 381 aa23.04■■□□□ 1.28
CTSD-206ENST00000497544 U2AF1L4Q8WU68 220 aaKnown RBP23.04■■□□□ 1.28
CTSD-206ENST00000497544 NUDT12Q9BQG2 462 aa23.04■■□□□ 1.28
CTSD-206ENST00000497544 ALG1Q9BT22 464 aa23.04■■□□□ 1.28
CTSD-206ENST00000497544 SMC3Q9UQE7 1217 aa23.04■■□□□ 1.28
CTSD-206ENST00000497544 HSP90AA1P07900 732 aaKnown RBP23.03■■□□□ 1.28
CTSD-206ENST00000497544 COL9A1P20849 921 aa23.03■■□□□ 1.28
CTSD-206ENST00000497544 RNF207Q6ZRF8 634 aa23.03■■□□□ 1.28
CTSD-206ENST00000497544 SAMD3Q8N6K7 520 aa23.03■■□□□ 1.28
CTSD-206ENST00000497544 RGS22Q8NE09 1264 aa23.03■■□□□ 1.28
CTSD-206ENST00000497544 CCDC148Q8NFR7 591 aa23.03■■□□□ 1.28
CTSD-206ENST00000497544 MAF1Q9H063 256 aa23.03■■□□□ 1.28
CTSD-206ENST00000497544 A1CFQ9NQ94 594 aaKnown RBP23.03■■□□□ 1.28
CTSD-206ENST00000497544 SH3GLB2Q9NR46 395 aa23.03■■□□□ 1.28
CTSD-206ENST00000497544 SRRDQ9UH36 339 aa23.03■■□□□ 1.28
CTSD-206ENST00000497544 KIF3AQ9Y496 699 aa23.03■■□□□ 1.28
CTSD-206ENST00000497544 SMCO2A6NFE2 343 aa23.02■■□□□ 1.28
CTSD-206ENST00000497544 CFBP00751 764 aa23.02■■□□□ 1.28
CTSD-206ENST00000497544 PPP1R18Q6NYC8 613 aa23.02■■□□□ 1.28
CTSD-206ENST00000497544 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.02■■□□□ 1.28
CTSD-206ENST00000497544 DPP9Q86TI2 863 aa23.02■■□□□ 1.28
CTSD-206ENST00000497544 TBC1D5Q92609 795 aa23.02■■□□□ 1.28
CTSD-206ENST00000497544 CUL5Q93034 780 aa23.02■■□□□ 1.28
CTSD-206ENST00000497544 AIFM3Q96NN9 605 aa23.02■■□□□ 1.28
CTSD-206ENST00000497544 PSTPIP2Q9H939 334 aa23.02■■□□□ 1.28
CTSD-206ENST00000497544 VPS54Q9P1Q0 977 aa23.02■■□□□ 1.28
CTSD-206ENST00000497544 PFASO15067 1338 aa23.02■■□□□ 1.28
CTSD-206ENST00000497544 PLXNB2O15031 1838 aa23.01■■□□□ 1.27
CTSD-206ENST00000497544 ADORA2AP29274 412 aa23.01■■□□□ 1.27
CTSD-206ENST00000497544 MRPL12P52815 198 aaKnown RBP23.01■■□□□ 1.27
CTSD-206ENST00000497544 NLRP5P59047 1200 aa23.01■■□□□ 1.27
CTSD-206ENST00000497544 MAP2K5Q13163 448 aa23.01■■□□□ 1.27
CTSD-206ENST00000497544 BAATQ14032 418 aaPredicted RBP23.01■■□□□ 1.27
CTSD-206ENST00000497544 GRB14Q14449 540 aa23.01■■□□□ 1.27
CTSD-206ENST00000497544 SOCS4Q8WXH5 440 aa23.01■■□□□ 1.27
CTSD-206ENST00000497544 INTS4Q96HW7 963 aaKnown RBP23.01■■□□□ 1.27
CTSD-206ENST00000497544 C6orf50Q9HD87 102 aa23.01■■□□□ 1.27
CTSD-206ENST00000497544 SLC5A4Q9NY91 659 aa23.01■■□□□ 1.27
CTSD-206ENST00000497544 MAP3K20Q9NYL2 800 aaKnown RBP23.01■■□□□ 1.27
CTSD-206ENST00000497544 CYP39A1Q9NYL5 469 aa23.01■■□□□ 1.27
CTSD-206ENST00000497544 GJD2Q9UKL4 321 aa23.01■■□□□ 1.27
CTSD-206ENST00000497544 RPTORQ8N122 1335 aa23.01■■□□□ 1.27
CTSD-206ENST00000497544 POTEB2H3BUK9 544 aa23■■□□□ 1.27
CTSD-206ENST00000497544 GCOM1H8Y6P7 765 aaPredicted RBP23■■□□□ 1.27
CTSD-206ENST00000497544 POLR2MP0CAP2 368 aa23■■□□□ 1.27
CTSD-206ENST00000497544 CALML3P27482 149 aa23■■□□□ 1.27
CTSD-206ENST00000497544 GNA11P29992 359 aa23■■□□□ 1.27
CTSD-206ENST00000497544 TRIM29Q14134 588 aa23■■□□□ 1.27
CTSD-206ENST00000497544 MORN1Q5T089 497 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 337.2 ms