RNA–Protein interactions for RNA: ENST00000497483.1

HDAC10-219, Transcript of histone deacetylase 10, human

TSL 2

Gene HDAC10, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC10-219	ENST00000497483	EDNRB	P24530	442 aa		28.96	■■■□□ 2.23
HDAC10-219	ENST00000497483	CALML3	P27482	149 aa		28.96	■■■□□ 2.23
HDAC10-219	ENST00000497483	USH1G	Q495M9	461 aa		28.96	■■■□□ 2.23
HDAC10-219	ENST00000497483	EEPD1	Q7L9B9	569 aa		28.96	■■■□□ 2.23
HDAC10-219	ENST00000497483	MAP4K1	Q92918	833 aa		28.96	■■■□□ 2.23
HDAC10-219	ENST00000497483	MPHOSPH6	Q99547	160 aa	Known RBP	28.96	■■■□□ 2.23
HDAC10-219	ENST00000497483	DCDC2C	A8MYV0	355 aa		28.95	■■■□□ 2.22
HDAC10-219	ENST00000497483	CDK7	P50613	346 aa		28.95	■■■□□ 2.22
HDAC10-219	ENST00000497483	NOL8	Q76FK4	1167 aa	Known RBP	28.95	■■■□□ 2.22
HDAC10-219	ENST00000497483	BAD	Q92934	168 aa		28.95	■■■□□ 2.22
HDAC10-219	ENST00000497483	RBM47	A0AV96	593 aa	Known RBP	28.94	■■■□□ 2.22
HDAC10-219	ENST00000497483		E7EWF7	191 aa		28.94	■■■□□ 2.22
HDAC10-219	ENST00000497483	BEX3	Q00994	111 aa		28.94	■■■□□ 2.22
HDAC10-219	ENST00000497483	FAAP100	Q0VG06	881 aa		28.94	■■■□□ 2.22
HDAC10-219	ENST00000497483	FSCN1	Q16658	493 aa	Known RBP	28.94	■■■□□ 2.22
HDAC10-219	ENST00000497483	QRICH1	Q2TAL8	776 aa		28.94	■■■□□ 2.22
HDAC10-219	ENST00000497483	DUSP28	Q4G0W2	176 aa		28.94	■■■□□ 2.22
HDAC10-219	ENST00000497483	RALYL	Q86SE5	291 aa	Known RBP	28.94	■■■□□ 2.22
HDAC10-219	ENST00000497483	AP5M1	Q9H0R1	490 aa		28.94	■■■□□ 2.22
HDAC10-219	ENST00000497483	JMJD4	Q9H9V9	463 aa		28.94	■■■□□ 2.22
HDAC10-219	ENST00000497483	KIAA1217	Q5T5P2	1943 aa		28.93	■■■□□ 2.22
HDAC10-219	ENST00000497483	CABYR	O75952	493 aa		28.93	■■■□□ 2.22
HDAC10-219	ENST00000497483	KIAA1211	Q6ZU35	1233 aa		28.93	■■■□□ 2.22
HDAC10-219	ENST00000497483	NCOA7	Q8NI08	942 aa		28.93	■■■□□ 2.22
HDAC10-219	ENST00000497483	TAF6L	Q9Y6J9	622 aa		28.93	■■■□□ 2.22
HDAC10-219	ENST00000497483	ARVCF	O00192	962 aa		28.92	■■■□□ 2.22
HDAC10-219	ENST00000497483	ITGB8	P26012	769 aa		28.92	■■■□□ 2.22
HDAC10-219	ENST00000497483	STAG2	Q8N3U4	1231 aa		28.92	■■■□□ 2.22
HDAC10-219	ENST00000497483	MTMR8	Q96EF0	704 aa		28.92	■■■□□ 2.22
HDAC10-219	ENST00000497483	TMEM39A	Q9NV64	488 aa		28.92	■■■□□ 2.22
HDAC10-219	ENST00000497483	MAD2L2	Q9UI95	211 aa		28.92	■■■□□ 2.22
HDAC10-219	ENST00000497483	TBX21	Q9UL17	535 aa		28.92	■■■□□ 2.22
HDAC10-219	ENST00000497483		B4DLN1	442 aa		28.91	■■■□□ 2.22
HDAC10-219	ENST00000497483	DYNC1LI2	O43237	492 aa	Predicted RBP	28.91	■■■□□ 2.22
HDAC10-219	ENST00000497483	DHX16	O60231	1041 aa	Known RBP	28.91	■■■□□ 2.22
HDAC10-219	ENST00000497483	MRPL12	P52815	198 aa	Known RBP	28.91	■■■□□ 2.22
HDAC10-219	ENST00000497483	PDE4D	Q08499	809 aa		28.91	■■■□□ 2.22
HDAC10-219	ENST00000497483	STOX1	Q6ZVD7	989 aa		28.91	■■■□□ 2.22
HDAC10-219	ENST00000497483	CENPQ	Q7L2Z9	268 aa	Predicted RBP	28.91	■■■□□ 2.22
HDAC10-219	ENST00000497483	FBXO11	Q86XK2	927 aa		28.91	■■■□□ 2.22
HDAC10-219	ENST00000497483	RBM8A	Q9Y5S9	174 aa	Known RBP	28.91	■■■□□ 2.22
HDAC10-219	ENST00000497483	ERICH2	A1L162	156 aa		28.9	■■■□□ 2.22
HDAC10-219	ENST00000497483	PALM3	A6NDB9	673 aa	Predicted RBP	28.9	■■■□□ 2.22
HDAC10-219	ENST00000497483	KLRF2	D3W0D1	207 aa		28.9	■■■□□ 2.22
HDAC10-219	ENST00000497483	IFIT3	O14879	490 aa	Known RBP	28.9	■■■□□ 2.22
HDAC10-219	ENST00000497483	ZEB2	O60315	1214 aa		28.9	■■■□□ 2.22
HDAC10-219	ENST00000497483	RAG1	P15918	1043 aa		28.9	■■■□□ 2.22
HDAC10-219	ENST00000497483	SART3	Q15020	963 aa	Known RBP	28.9	■■■□□ 2.22
HDAC10-219	ENST00000497483	MCF2L2	Q86YR7	1114 aa		28.9	■■■□□ 2.22
HDAC10-219	ENST00000497483	FAM126B	Q8IXS8	530 aa		28.9	■■■□□ 2.22
HDAC10-219	ENST00000497483	SLC43A3	Q8NBI5	491 aa		28.9	■■■□□ 2.22
HDAC10-219	ENST00000497483	SEZ6L	Q9BYH1	1024 aa		28.9	■■■□□ 2.22
HDAC10-219	ENST00000497483	WDR11	Q9BZH6	1224 aa		28.9	■■■□□ 2.22
HDAC10-219	ENST00000497483	MRPL11	Q9Y3B7	192 aa	Known RBP	28.9	■■■□□ 2.22
HDAC10-219	ENST00000497483	LAMA2	P24043	3122 aa	Known RBP	28.89	■■■□□ 2.22
HDAC10-219	ENST00000497483	PTGS1	P23219	599 aa		28.89	■■■□□ 2.22
HDAC10-219	ENST00000497483	GRM4	Q14833	912 aa		28.89	■■■□□ 2.22
HDAC10-219	ENST00000497483	TMEM63B	Q5T3F8	832 aa		28.89	■■■□□ 2.22
HDAC10-219	ENST00000497483	CXCL17	Q6UXB2	119 aa		28.89	■■■□□ 2.22
HDAC10-219	ENST00000497483	VTI1A	Q96AJ9	217 aa		28.89	■■■□□ 2.22
HDAC10-219	ENST00000497483	NKRF	O15226	690 aa	Known RBP eCLIP	28.88	■■■□□ 2.21
HDAC10-219	ENST00000497483	GHRHR	Q02643	423 aa		28.88	■■■□□ 2.21
HDAC10-219	ENST00000497483	WTAP	Q15007	396 aa		28.88	■■■□□ 2.21
HDAC10-219	ENST00000497483	MB21D2	Q8IYB1	491 aa	Predicted RBP	28.88	■■■□□ 2.21
HDAC10-219	ENST00000497483	SYTL5	Q8TDW5	730 aa	Predicted RBP	28.88	■■■□□ 2.21
HDAC10-219	ENST00000497483	AMN	Q9BXJ7	453 aa		28.88	■■■□□ 2.21
HDAC10-219	ENST00000497483	ANTXR2	P58335	489 aa		28.87	■■■□□ 2.21
HDAC10-219	ENST00000497483	SHH	Q15465	462 aa		28.87	■■■□□ 2.21
HDAC10-219	ENST00000497483	BMP2KL	Q5H9B9	411 aa		28.87	■■■□□ 2.21
HDAC10-219	ENST00000497483	C9orf50	Q5SZB4	431 aa		28.87	■■■□□ 2.21
HDAC10-219	ENST00000497483	SCFD2	Q8WU76	684 aa		28.87	■■■□□ 2.21
HDAC10-219	ENST00000497483	ESYT1	Q9BSJ8	1104 aa		28.87	■■■□□ 2.21
HDAC10-219	ENST00000497483	LSG1	Q9H089	658 aa	Known RBP	28.87	■■■□□ 2.21
HDAC10-219	ENST00000497483	VAT1L	Q9HCJ6	419 aa		28.87	■■■□□ 2.21
HDAC10-219	ENST00000497483	SCN10A	Q9Y5Y9	1956 aa		28.87	■■■□□ 2.21
HDAC10-219	ENST00000497483	ZBTB5	O15062	677 aa		28.86	■■■□□ 2.21
HDAC10-219	ENST00000497483	TLR3	O15455	904 aa	Known RBP	28.86	■■■□□ 2.21
HDAC10-219	ENST00000497483	FPGS	Q05932	587 aa		28.86	■■■□□ 2.21
HDAC10-219	ENST00000497483	TROAP	Q12815	778 aa		28.86	■■■□□ 2.21
HDAC10-219	ENST00000497483	PPP2R5B	Q15173	497 aa		28.86	■■■□□ 2.21
HDAC10-219	ENST00000497483	TBC1D5	Q92609	795 aa		28.86	■■■□□ 2.21
HDAC10-219	ENST00000497483	MTA3	Q9BTC8	594 aa		28.86	■■■□□ 2.21
HDAC10-219	ENST00000497483	SENP2	Q9HC62	589 aa		28.86	■■■□□ 2.21
HDAC10-219	ENST00000497483	COL20A1	Q9P218	1284 aa		28.86	■■■□□ 2.21
HDAC10-219	ENST00000497483	BAZ2B	Q9UIF8	2168 aa	Known RBP	28.85	■■■□□ 2.21
HDAC10-219	ENST00000497483	TIMP1	P01033	207 aa		28.85	■■■□□ 2.21
HDAC10-219	ENST00000497483	CD4	P01730	458 aa		28.85	■■■□□ 2.21
HDAC10-219	ENST00000497483	CPT1A	P50416	773 aa		28.85	■■■□□ 2.21
HDAC10-219	ENST00000497483	ITGA7	Q13683	1181 aa		28.85	■■■□□ 2.21
HDAC10-219	ENST00000497483	NSUN6	Q8TEA1	469 aa	Known RBP	28.85	■■■□□ 2.21
HDAC10-219	ENST00000497483	RIOX1	Q9H6W3	641 aa		28.85	■■■□□ 2.21
HDAC10-219	ENST00000497483	PPP1R11	O60927	126 aa	Predicted RBP	28.84	■■■□□ 2.21
HDAC10-219	ENST00000497483	SLC35G1	Q2M3R5	365 aa		28.84	■■■□□ 2.21
HDAC10-219	ENST00000497483	TMEM67	Q5HYA8	995 aa		28.84	■■■□□ 2.21
HDAC10-219	ENST00000497483	IGDCC4	Q8TDY8	1250 aa		28.84	■■■□□ 2.21
HDAC10-219	ENST00000497483	IWS1	Q96ST2	819 aa		28.84	■■■□□ 2.21
HDAC10-219	ENST00000497483	POLR3E	Q9NVU0	708 aa		28.84	■■■□□ 2.21
HDAC10-219	ENST00000497483	MAP3K20	Q9NYL2	800 aa	Known RBP	28.84	■■■□□ 2.21
HDAC10-219	ENST00000497483	OPLAH	O14841	1288 aa		28.83	■■■□□ 2.21
HDAC10-219	ENST00000497483	HSD17B4	P51659	736 aa		28.83	■■■□□ 2.21

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms