RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 EDNRBP24530 442 aa21.72■■□□□ 1.07
RPN1-208ENST00000497415 CST5P28325 142 aaPredicted RBP21.72■■□□□ 1.07
RPN1-208ENST00000497415 SNX17Q15036 470 aa21.72■■□□□ 1.07
RPN1-208ENST00000497415 MCF2L2Q86YR7 1114 aa21.72■■□□□ 1.07
RPN1-208ENST00000497415 KCNB2Q92953 911 aa21.72■■□□□ 1.07
RPN1-208ENST00000497415 PRO3102Q9H379 93 aa21.72■■□□□ 1.07
RPN1-208ENST00000497415 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.71■■□□□ 1.07
RPN1-208ENST00000497415 CCDC69A6NI79 296 aa21.71■■□□□ 1.07
RPN1-208ENST00000497415 SMARCA1P28370 1054 aa21.71■■□□□ 1.07
RPN1-208ENST00000497415 ATN1P54259 1190 aaPredicted RBP21.71■■□□□ 1.07
RPN1-208ENST00000497415 EXOSC10Q01780 885 aaKnown RBP21.71■■□□□ 1.07
RPN1-208ENST00000497415 GHRHRQ02643 423 aa21.71■■□□□ 1.07
RPN1-208ENST00000497415 TNFAIP2Q03169 654 aa21.71■■□□□ 1.07
RPN1-208ENST00000497415 C1orf53Q5VUE5 145 aa21.71■■□□□ 1.07
RPN1-208ENST00000497415 IQSEC1Q6DN90 963 aa21.71■■□□□ 1.07
RPN1-208ENST00000497415 FBXO16Q8IX29 292 aaPredicted RBP21.71■■□□□ 1.07
RPN1-208ENST00000497415 NUP133Q8WUM0 1156 aa21.71■■□□□ 1.07
RPN1-208ENST00000497415 PIGSQ96S52 555 aa21.71■■□□□ 1.07
RPN1-208ENST00000497415 PDGFCQ9NRA1 345 aa21.71■■□□□ 1.07
RPN1-208ENST00000497415 GNEQ9Y223 722 aaKnown RBP21.71■■□□□ 1.07
RPN1-208ENST00000497415 MYADML2A6NDP7 307 aa21.7■■□□□ 1.06
RPN1-208ENST00000497415 OPLAHO14841 1288 aa21.7■■□□□ 1.06
RPN1-208ENST00000497415 KIF5BP33176 963 aa21.7■■□□□ 1.06
RPN1-208ENST00000497415 TRAF1Q13077 416 aa21.7■■□□□ 1.06
RPN1-208ENST00000497415 KRT32Q14532 448 aa21.7■■□□□ 1.06
RPN1-208ENST00000497415 ADCK5Q3MIX3 580 aa21.7■■□□□ 1.06
RPN1-208ENST00000497415 CHRDL2Q6WN34 429 aa21.7■■□□□ 1.06
RPN1-208ENST00000497415 NFXL1Q6ZNB6 911 aa21.7■■□□□ 1.06
RPN1-208ENST00000497415 EEPD1Q7L9B9 569 aa21.7■■□□□ 1.06
RPN1-208ENST00000497415 SGMS1Q86VZ5 419 aa21.7■■□□□ 1.06
RPN1-208ENST00000497415 CTCFLQ8NI51 663 aaPredicted RBP21.7■■□□□ 1.06
RPN1-208ENST00000497415 SYTL5Q8TDW5 730 aaPredicted RBP21.7■■□□□ 1.06
RPN1-208ENST00000497415 FERMT2Q96AC1 680 aa21.7■■□□□ 1.06
RPN1-208ENST00000497415 MYL10Q9BUA6 226 aa21.7■■□□□ 1.06
RPN1-208ENST00000497415 SPC25Q9HBM1 224 aa21.7■■□□□ 1.06
RPN1-208ENST00000497415 ZMYND8Q9ULU4 1186 aaPredicted RBP21.7■■□□□ 1.06
RPN1-208ENST00000497415 PNMA6FA0A0J9YX94 578 aa21.69■■□□□ 1.06
RPN1-208ENST00000497415 A0A1W2PQ45 241 aaPredicted RBP21.69■■□□□ 1.06
RPN1-208ENST00000497415 A0A1W2PQY0 241 aa21.69■■□□□ 1.06
RPN1-208ENST00000497415 RBM47A0AV96 593 aaKnown RBP21.69■■□□□ 1.06
RPN1-208ENST00000497415 MOXD2PA6NHM9 499 aa21.69■■□□□ 1.06
RPN1-208ENST00000497415 CTAGE5O15320 804 aa21.69■■□□□ 1.06
RPN1-208ENST00000497415 SMPD1P17405 629 aa21.69■■□□□ 1.06
RPN1-208ENST00000497415 HSPA4P34932 840 aa21.69■■□□□ 1.06
RPN1-208ENST00000497415 ACLYP53396 1101 aa21.69■■□□□ 1.06
RPN1-208ENST00000497415 RTP1P59025 263 aa21.69■■□□□ 1.06
RPN1-208ENST00000497415 IRX5P78411 483 aaPredicted RBP21.69■■□□□ 1.06
RPN1-208ENST00000497415 KCNA10Q16322 511 aa21.69■■□□□ 1.06
RPN1-208ENST00000497415 HABP4Q5JVS0 413 aaKnown RBP21.69■■□□□ 1.06
RPN1-208ENST00000497415 DHX32Q7L7V1 743 aaKnown RBP21.69■■□□□ 1.06
RPN1-208ENST00000497415 MPHOSPH6Q99547 160 aaKnown RBP21.69■■□□□ 1.06
RPN1-208ENST00000497415 LZTS2Q9BRK4 669 aa21.69■■□□□ 1.06
RPN1-208ENST00000497415 SPZ1Q9BXG8 430 aa21.69■■□□□ 1.06
RPN1-208ENST00000497415 LRRC2Q9BYS8 371 aa21.69■■□□□ 1.06
RPN1-208ENST00000497415 MAP3K20Q9NYL2 800 aaKnown RBP21.69■■□□□ 1.06
RPN1-208ENST00000497415 COL20A1Q9P218 1284 aa21.69■■□□□ 1.06
RPN1-208ENST00000497415 Q9Y3F1 56 aa21.69■■□□□ 1.06
RPN1-208ENST00000497415 PCDHA1Q9Y5I3 950 aa21.69■■□□□ 1.06
RPN1-208ENST00000497415 B4DLN1 442 aa21.68■■□□□ 1.06
RPN1-208ENST00000497415 C6orf222P0C671 652 aaPredicted RBP21.68■■□□□ 1.06
RPN1-208ENST00000497415 CALM1P0DP23 149 aa21.68■■□□□ 1.06
RPN1-208ENST00000497415 CALM2P0DP24 149 aa21.68■■□□□ 1.06
RPN1-208ENST00000497415 CALM3P0DP25 149 aa21.68■■□□□ 1.06
RPN1-208ENST00000497415 HSD17B4P51659 736 aa21.68■■□□□ 1.06
RPN1-208ENST00000497415 MRPL12P52815 198 aaKnown RBP21.68■■□□□ 1.06
RPN1-208ENST00000497415 HOMER1Q86YM7 354 aa21.68■■□□□ 1.06
RPN1-208ENST00000497415 SAMD3Q8N6K7 520 aa21.68■■□□□ 1.06
RPN1-208ENST00000497415 PCSK9Q8NBP7 692 aaKnown RBP21.68■■□□□ 1.06
RPN1-208ENST00000497415 TAAR1Q96RJ0 339 aa21.68■■□□□ 1.06
RPN1-208ENST00000497415 DNAH12Q6ZR08 3092 aa21.68■■□□□ 1.06
RPN1-208ENST00000497415 EPB41L2O43491 1005 aaKnown RBP21.67■■□□□ 1.06
RPN1-208ENST00000497415 REC8O95072 547 aa21.67■■□□□ 1.06
RPN1-208ENST00000497415 SYN1P17600 705 aa21.67■■□□□ 1.06
RPN1-208ENST00000497415 GNAQP50148 359 aa21.67■■□□□ 1.06
RPN1-208ENST00000497415 PDE4DQ08499 809 aa21.67■■□□□ 1.06
RPN1-208ENST00000497415 GDF15Q99988 308 aa21.67■■□□□ 1.06
RPN1-208ENST00000497415 SLC12A7Q9Y666 1083 aa21.67■■□□□ 1.06
RPN1-208ENST00000497415 CFBP00751 764 aa21.66■■□□□ 1.06
RPN1-208ENST00000497415 HMGB1P09429 215 aaKnown RBP21.66■■□□□ 1.06
RPN1-208ENST00000497415 DUSP28Q4G0W2 176 aa21.66■■□□□ 1.06
RPN1-208ENST00000497415 GNASQ5JWF2 1037 aa21.66■■□□□ 1.06
RPN1-208ENST00000497415 TMEM63BQ5T3F8 832 aa21.66■■□□□ 1.06
RPN1-208ENST00000497415 TLK2Q86UE8 772 aa21.66■■□□□ 1.06
RPN1-208ENST00000497415 NSUN6Q8TEA1 469 aaKnown RBP21.66■■□□□ 1.06
RPN1-208ENST00000497415 IWS1Q96ST2 819 aa21.66■■□□□ 1.06
RPN1-208ENST00000497415 RBM27Q9P2N5 1060 aaKnown RBP21.66■■□□□ 1.06
RPN1-208ENST00000497415 ATP11BQ9Y2G3 1177 aa21.66■■□□□ 1.06
RPN1-208ENST00000497415 PLEKHA8P1O95397 391 aa21.65■■□□□ 1.06
RPN1-208ENST00000497415 ASGR1P07306 291 aa21.65■■□□□ 1.06
RPN1-208ENST00000497415 RXRAP19793 462 aa21.65■■□□□ 1.06
RPN1-208ENST00000497415 TRIM60Q495X7 471 aa21.65■■□□□ 1.06
RPN1-208ENST00000497415 NOL8Q76FK4 1167 aaKnown RBP21.65■■□□□ 1.06
RPN1-208ENST00000497415 SRBD1Q8N5C6 995 aaKnown RBP21.65■■□□□ 1.06
RPN1-208ENST00000497415 FANCBQ8NB91 859 aa21.65■■□□□ 1.06
RPN1-208ENST00000497415 RMDN3Q96TC7 470 aa21.65■■□□□ 1.06
RPN1-208ENST00000497415 WDR11Q9BZH6 1224 aa21.65■■□□□ 1.06
RPN1-208ENST00000497415 SNX14Q9Y5W7 946 aa21.65■■□□□ 1.06
RPN1-208ENST00000497415 ELP1O95163 1332 aa21.64■■□□□ 1.05
RPN1-208ENST00000497415 DYNC1LI2O43237 492 aaPredicted RBP21.64■■□□□ 1.05
RPN1-208ENST00000497415 PTGS1P23219 599 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms