RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 FBXO40Q9UH90 709 aa20.94■□□□□ 0.94
RGP1-202ENST00000496906 PCDHA6Q9UN73 950 aa20.94■□□□□ 0.94
RGP1-202ENST00000496906 PCDHA8Q9Y5H6 950 aa20.94■□□□□ 0.94
RGP1-202ENST00000496906 GCOM1H8Y6P7 765 aaPredicted RBP20.93■□□□□ 0.94
RGP1-202ENST00000496906 CFBP00751 764 aa20.93■□□□□ 0.94
RGP1-202ENST00000496906 POLR2MP0CAP2 368 aa20.93■□□□□ 0.94
RGP1-202ENST00000496906 HSD17B4P51659 736 aa20.93■□□□□ 0.94
RGP1-202ENST00000496906 GNL2Q13823 731 aaKnown RBP20.93■□□□□ 0.94
RGP1-202ENST00000496906 PORCNQ9H237 461 aa20.93■□□□□ 0.94
RGP1-202ENST00000496906 R3HDMLQ9H3Y0 253 aa20.93■□□□□ 0.94
RGP1-202ENST00000496906 BIN2Q9UBW5 565 aaPredicted RBP20.93■□□□□ 0.94
RGP1-202ENST00000496906 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.93■□□□□ 0.94
RGP1-202ENST00000496906 NOSTRINQ8IVI9 506 aa20.93■□□□□ 0.94
RGP1-202ENST00000496906 SAMD3Q8N6K7 520 aa20.93■□□□□ 0.94
RGP1-202ENST00000496906 CFHR5Q9BXR6 569 aa20.93■□□□□ 0.94
RGP1-202ENST00000496906 MAF1Q9H063 256 aa20.93■□□□□ 0.94
RGP1-202ENST00000496906 ZSCAN16Q9H4T2 348 aaPredicted RBP20.93■□□□□ 0.94
RGP1-202ENST00000496906 MROH8Q9H579 483 aa20.93■□□□□ 0.94
RGP1-202ENST00000496906 TMEM260Q9NX78 707 aa20.93■□□□□ 0.94
RGP1-202ENST00000496906 MAP3K20Q9NYL2 800 aaKnown RBP20.93■□□□□ 0.94
RGP1-202ENST00000496906 HOXA13P31271 388 aaPredicted RBP20.92■□□□□ 0.94
RGP1-202ENST00000496906 EARS2Q5JPH6 523 aaKnown RBP20.92■□□□□ 0.94
RGP1-202ENST00000496906 JAKMIP3Q5VZ66 844 aa20.92■□□□□ 0.94
RGP1-202ENST00000496906 NSMFQ6X4W1 530 aa20.92■□□□□ 0.94
RGP1-202ENST00000496906 BRAPQ7Z569 592 aa20.92■□□□□ 0.94
RGP1-202ENST00000496906 EFCC1Q9HA90 598 aa20.92■□□□□ 0.94
RGP1-202ENST00000496906 A1CFQ9NQ94 594 aaKnown RBP20.92■□□□□ 0.94
RGP1-202ENST00000496906 RBBP6Q7Z6E9 1792 aaKnown RBP20.92■□□□□ 0.94
RGP1-202ENST00000496906 RPS6P62753 249 aaKnown RBP20.91■□□□□ 0.94
RGP1-202ENST00000496906 AP3B2Q13367 1082 aa20.91■□□□□ 0.94
RGP1-202ENST00000496906 NOM1Q5C9Z4 860 aaKnown RBP20.91■□□□□ 0.94
RGP1-202ENST00000496906 SLC30A10Q6XR72 485 aa20.91■□□□□ 0.94
RGP1-202ENST00000496906 RNF207Q6ZRF8 634 aa20.91■□□□□ 0.94
RGP1-202ENST00000496906 RNF186Q9NXI6 227 aa20.91■□□□□ 0.94
RGP1-202ENST00000496906 PIK3AP1Q6ZUJ8 805 aa20.9■□□□□ 0.94
RGP1-202ENST00000496906 KRT25Q7Z3Z0 450 aa20.9■□□□□ 0.94
RGP1-202ENST00000496906 CYP39A1Q9NYL5 469 aa20.9■□□□□ 0.94
RGP1-202ENST00000496906 CCDC194A0A1B0GVG4 234 aa20.89■□□□□ 0.94
RGP1-202ENST00000496906 FAM205CA6NFA0 338 aa20.89■□□□□ 0.94
RGP1-202ENST00000496906 BAATQ14032 418 aaPredicted RBP20.89■□□□□ 0.94
RGP1-202ENST00000496906 MCTP2Q6DN12 878 aa20.89■□□□□ 0.94
RGP1-202ENST00000496906 SYTL5Q8TDW5 730 aaPredicted RBP20.89■□□□□ 0.94
RGP1-202ENST00000496906 PGBD1Q96JS3 809 aa20.89■□□□□ 0.94
RGP1-202ENST00000496906 COL20A1Q9P218 1284 aa20.89■□□□□ 0.94
RGP1-202ENST00000496906 SPDYE3A6NKU9 549 aa20.89■□□□□ 0.93
RGP1-202ENST00000496906 TRPA1O75762 1119 aa20.89■□□□□ 0.93
RGP1-202ENST00000496906 TBC1D8O95759 1140 aa20.89■□□□□ 0.93
RGP1-202ENST00000496906 FOSP01100 380 aaPredicted RBP20.89■□□□□ 0.93
RGP1-202ENST00000496906 WDR78Q5VTH9 848 aa20.89■□□□□ 0.93
RGP1-202ENST00000496906 ANKRD35Q8N283 1001 aa20.89■□□□□ 0.93
RGP1-202ENST00000496906 ANO3Q9BYT9 981 aa20.89■□□□□ 0.93
RGP1-202ENST00000496906 PFASO15067 1338 aa20.88■□□□□ 0.93
RGP1-202ENST00000496906 CEP350Q5VT06 3117 aa20.88■□□□□ 0.93
RGP1-202ENST00000496906 MAPK4P31152 587 aa20.88■□□□□ 0.93
RGP1-202ENST00000496906 NONOQ15233 471 aaKnown RBP eCLIP20.88■□□□□ 0.93
RGP1-202ENST00000496906 MYSM1Q5VVJ2 828 aa20.88■□□□□ 0.93
RGP1-202ENST00000496906 FAM173BQ6P4H8 233 aa20.88■□□□□ 0.93
RGP1-202ENST00000496906 FCHSD1Q86WN1 690 aa20.88■□□□□ 0.93
RGP1-202ENST00000496906 CCAR1Q8IX12 1150 aaKnown RBP20.88■□□□□ 0.93
RGP1-202ENST00000496906 KCTD2Q14681 263 aa20.87■□□□□ 0.93
RGP1-202ENST00000496906 GPR142Q7Z601 462 aa20.87■□□□□ 0.93
RGP1-202ENST00000496906 MMP19Q99542 508 aa20.87■□□□□ 0.93
RGP1-202ENST00000496906 ATP6V1DQ9Y5K8 247 aa20.87■□□□□ 0.93
RGP1-202ENST00000496906 FCER1AP12319 257 aa20.86■□□□□ 0.93
RGP1-202ENST00000496906 INF2Q27J81 1249 aa20.86■□□□□ 0.93
RGP1-202ENST00000496906 ABRAQ8N0Z2 381 aa20.86■□□□□ 0.93
RGP1-202ENST00000496906 TBCKQ8TEA7 893 aa20.86■□□□□ 0.93
RGP1-202ENST00000496906 TNPO1Q92973 898 aaKnown RBP20.86■□□□□ 0.93
RGP1-202ENST00000496906 SAGE1Q9NXZ1 904 aa20.86■□□□□ 0.93
RGP1-202ENST00000496906 FOXD4L6Q3SYB3 417 aaPredicted RBP20.85■□□□□ 0.93
RGP1-202ENST00000496906 FOXD4L3Q6VB84 417 aaPredicted RBP20.85■□□□□ 0.93
RGP1-202ENST00000496906 PLEKHH3Q7Z736 793 aa20.85■□□□□ 0.93
RGP1-202ENST00000496906 JMYQ8N9B5 988 aa20.85■□□□□ 0.93
RGP1-202ENST00000496906 CRYGNQ8WXF5 182 aa20.85■□□□□ 0.93
RGP1-202ENST00000496906 PURBQ96QR8 312 aaKnown RBP20.85■□□□□ 0.93
RGP1-202ENST00000496906 TAAR1Q96RJ0 339 aa20.85■□□□□ 0.93
RGP1-202ENST00000496906 FRMPD4Q14CM0 1322 aa20.85■□□□□ 0.93
RGP1-202ENST00000496906 RPTORQ8N122 1335 aa20.85■□□□□ 0.93
RGP1-202ENST00000496906 DNAJC25-GNG10A0A024R161 153 aa20.85■□□□□ 0.93
RGP1-202ENST00000496906 STRNO43815 780 aa20.85■□□□□ 0.93
RGP1-202ENST00000496906 SREBF1P36956 1147 aa20.85■□□□□ 0.93
RGP1-202ENST00000496906 TRAPPC10P48553 1259 aa20.85■□□□□ 0.93
RGP1-202ENST00000496906 TOB1P50616 345 aaPredicted RBP20.85■□□□□ 0.93
RGP1-202ENST00000496906 MAP2K1Q02750 393 aaPredicted RBP20.85■□□□□ 0.93
RGP1-202ENST00000496906 RILPL1Q5EBL4 403 aa20.85■□□□□ 0.93
RGP1-202ENST00000496906 IVNS1ABPQ9Y6Y0 642 aa20.85■□□□□ 0.93
RGP1-202ENST00000496906 PCNTO95613 3336 aa20.84■□□□□ 0.93
RGP1-202ENST00000496906 POTEB2H3BUK9 544 aa20.84■□□□□ 0.93
RGP1-202ENST00000496906 PTPREP23469 700 aa20.84■□□□□ 0.93
RGP1-202ENST00000496906 GRB14Q14449 540 aa20.84■□□□□ 0.93
RGP1-202ENST00000496906 NEK8Q86SG6 692 aa20.84■□□□□ 0.93
RGP1-202ENST00000496906 FAM133AQ8N9E0 248 aa20.84■□□□□ 0.93
RGP1-202ENST00000496906 EHMT1Q9H9B1 1298 aa20.84■□□□□ 0.93
RGP1-202ENST00000496906 NOL7Q9UMY1 257 aaKnown RBP20.84■□□□□ 0.93
RGP1-202ENST00000496906 LCTP09848 1927 aa20.83■□□□□ 0.93
RGP1-202ENST00000496906 PLXNB2O15031 1838 aa20.83■□□□□ 0.93
RGP1-202ENST00000496906 EDIL3O43854 480 aa20.83■□□□□ 0.92
RGP1-202ENST00000496906 PGK2P07205 417 aa20.83■□□□□ 0.92
RGP1-202ENST00000496906 ADORA2AP29274 412 aa20.83■□□□□ 0.92
RGP1-202ENST00000496906 ARHGAP4P98171 946 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms