RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 A0A0U1RQG5 324 aaPredicted RBP17.64■□□□□ 0.41
NEK4-206ENST00000496822 DYNC1LI2O43237 492 aaPredicted RBP17.64■□□□□ 0.41
NEK4-206ENST00000496822 CDK7P50613 346 aa17.64■□□□□ 0.41
NEK4-206ENST00000496822 IFIT1BQ5T764 474 aaKnown RBP17.64■□□□□ 0.41
NEK4-206ENST00000496822 GPR153Q6NV75 609 aa17.64■□□□□ 0.41
NEK4-206ENST00000496822 CXCL17Q6UXB2 119 aa17.64■□□□□ 0.41
NEK4-206ENST00000496822 KIAA1211Q6ZU35 1233 aa17.64■□□□□ 0.41
NEK4-206ENST00000496822 STAG2Q8N3U4 1231 aa17.64■□□□□ 0.41
NEK4-206ENST00000496822 DEFB123Q8N688 67 aa17.64■□□□□ 0.41
NEK4-206ENST00000496822 TBX21Q9UL17 535 aa17.64■□□□□ 0.41
NEK4-206ENST00000496822 PNMA2Q9UL42 364 aa17.64■□□□□ 0.41
NEK4-206ENST00000496822 DCDC2CA8MYV0 355 aa17.63■□□□□ 0.41
NEK4-206ENST00000496822 ARVCFO00192 962 aa17.63■□□□□ 0.41
NEK4-206ENST00000496822 PARP1P09874 1014 aaKnown RBP17.63■□□□□ 0.41
NEK4-206ENST00000496822 RAG1P15918 1043 aa17.63■□□□□ 0.41
NEK4-206ENST00000496822 EDNRBP24530 442 aa17.63■□□□□ 0.41
NEK4-206ENST00000496822 FSCN1Q16658 493 aaKnown RBP17.63■□□□□ 0.41
NEK4-206ENST00000496822 QRICH1Q2TAL8 776 aa17.63■□□□□ 0.41
NEK4-206ENST00000496822 IQSEC1Q6DN90 963 aa17.63■□□□□ 0.41
NEK4-206ENST00000496822 STOX1Q6ZVD7 989 aa17.63■□□□□ 0.41
NEK4-206ENST00000496822 TBC1D5Q92609 795 aa17.63■□□□□ 0.41
NEK4-206ENST00000496822 VTI1AQ96AJ9 217 aa17.63■□□□□ 0.41
NEK4-206ENST00000496822 AP5M1Q9H0R1 490 aa17.63■□□□□ 0.41
NEK4-206ENST00000496822 LAMA2P24043 3122 aaKnown RBP17.62■□□□□ 0.41
NEK4-206ENST00000496822 SKAP1Q86WV1 359 aa17.62■□□□□ 0.41
NEK4-206ENST00000496822 FAM126BQ8IXS8 530 aa17.62■□□□□ 0.41
NEK4-206ENST00000496822 WDR11Q9BZH6 1224 aa17.62■□□□□ 0.41
NEK4-206ENST00000496822 JMJD4Q9H9V9 463 aa17.62■□□□□ 0.41
NEK4-206ENST00000496822 SENP2Q9HC62 589 aa17.62■□□□□ 0.41
NEK4-206ENST00000496822 VAT1LQ9HCJ6 419 aa17.62■□□□□ 0.41
NEK4-206ENST00000496822 U3KPZ7 1027 aaPredicted RBP17.62■□□□□ 0.41
NEK4-206ENST00000496822 LOC102724159A0A0B4J2E5 919 aa17.61■□□□□ 0.41
NEK4-206ENST00000496822 RBM47A0AV96 593 aaKnown RBP17.61■□□□□ 0.41
NEK4-206ENST00000496822 DHX16O60231 1041 aaKnown RBP17.61■□□□□ 0.41
NEK4-206ENST00000496822 PWP2Q15269 919 aaKnown RBP17.61■□□□□ 0.41
NEK4-206ENST00000496822 SLC35G1Q2M3R5 365 aa17.61■□□□□ 0.41
NEK4-206ENST00000496822 DUSP28Q4G0W2 176 aa17.61■□□□□ 0.41
NEK4-206ENST00000496822 COL20A1Q9P218 1284 aa17.61■□□□□ 0.41
NEK4-206ENST00000496822 MAD2L2Q9UI95 211 aa17.61■□□□□ 0.41
NEK4-206ENST00000496822 GRIN2DO15399 1336 aa17.61■□□□□ 0.41
NEK4-206ENST00000496822 ABCB11O95342 1321 aa17.61■□□□□ 0.41
NEK4-206ENST00000496822 MROH7Q68CQ1 1323 aa17.61■□□□□ 0.41
NEK4-206ENST00000496822 E7EWF7 191 aa17.6■□□□□ 0.41
NEK4-206ENST00000496822 NEFLP07196 543 aa17.6■□□□□ 0.41
NEK4-206ENST00000496822 PSMC6P62333 389 aa17.6■□□□□ 0.41
NEK4-206ENST00000496822 FPGSQ05932 587 aa17.6■□□□□ 0.41
NEK4-206ENST00000496822 PDE4DQ08499 809 aa17.6■□□□□ 0.41
NEK4-206ENST00000496822 TRDNQ13061 729 aa17.6■□□□□ 0.41
NEK4-206ENST00000496822 CHST3Q7LGC8 479 aa17.6■□□□□ 0.41
NEK4-206ENST00000496822 SLC43A3Q8NBI5 491 aa17.6■□□□□ 0.41
NEK4-206ENST00000496822 RGS22Q8NE09 1264 aa17.6■□□□□ 0.41
NEK4-206ENST00000496822 DNERQ8NFT8 737 aa17.6■□□□□ 0.41
NEK4-206ENST00000496822 SYTL5Q8TDW5 730 aaPredicted RBP17.6■□□□□ 0.41
NEK4-206ENST00000496822 MTMR10Q9NXD2 777 aa17.6■□□□□ 0.41
NEK4-206ENST00000496822 Q9Y3F1 56 aa17.6■□□□□ 0.41
NEK4-206ENST00000496822 KLRF2D3W0D1 207 aa17.59■□□□□ 0.41
NEK4-206ENST00000496822 OPLAHO14841 1288 aa17.59■□□□□ 0.41
NEK4-206ENST00000496822 IFIT3O14879 490 aaKnown RBP17.59■□□□□ 0.41
NEK4-206ENST00000496822 PPP1R11O60927 126 aaPredicted RBP17.59■□□□□ 0.41
NEK4-206ENST00000496822 TIMP1P01033 207 aa17.59■□□□□ 0.41
NEK4-206ENST00000496822 CD4P01730 458 aa17.59■□□□□ 0.41
NEK4-206ENST00000496822 ANTXR2P58335 489 aa17.59■□□□□ 0.41
NEK4-206ENST00000496822 FBXO11Q86XK2 927 aa17.59■□□□□ 0.41
NEK4-206ENST00000496822 COPS5Q92905 334 aa17.59■□□□□ 0.41
NEK4-206ENST00000496822 MAP4K1Q92918 833 aa17.59■□□□□ 0.41
NEK4-206ENST00000496822 TAAR1Q96RJ0 339 aa17.59■□□□□ 0.41
NEK4-206ENST00000496822 PPP1R12CQ9BZL4 782 aa17.59■□□□□ 0.41
NEK4-206ENST00000496822 RBM8AQ9Y5S9 174 aaKnown RBP17.59■□□□□ 0.41
NEK4-206ENST00000496822 PALM3A6NDB9 673 aaPredicted RBP17.58■□□□□ 0.4
NEK4-206ENST00000496822 ZEB2O60315 1214 aa17.58■□□□□ 0.4
NEK4-206ENST00000496822 CABYRO75952 493 aa17.58■□□□□ 0.4
NEK4-206ENST00000496822 ARIH2O95376 493 aa17.58■□□□□ 0.4
NEK4-206ENST00000496822 ITGA7Q13683 1181 aa17.58■□□□□ 0.4
NEK4-206ENST00000496822 PPP2R5BQ15173 497 aa17.58■□□□□ 0.4
NEK4-206ENST00000496822 RALYLQ86SE5 291 aaKnown RBP17.58■□□□□ 0.4
NEK4-206ENST00000496822 OR6J1Q8NGC5 347 aa17.58■□□□□ 0.4
NEK4-206ENST00000496822 MTMR8Q96EF0 704 aa17.58■□□□□ 0.4
NEK4-206ENST00000496822 COL6A3P12111 3177 aa17.58■□□□□ 0.4
NEK4-206ENST00000496822 TLR3O15455 904 aaKnown RBP17.57■□□□□ 0.4
NEK4-206ENST00000496822 COL9A3Q14050 684 aaPredicted RBP17.57■□□□□ 0.4
NEK4-206ENST00000496822 GRM4Q14833 912 aa17.57■□□□□ 0.4
NEK4-206ENST00000496822 MFSD5Q6N075 450 aa17.57■□□□□ 0.4
NEK4-206ENST00000496822 MB21D2Q8IYB1 491 aaPredicted RBP17.57■□□□□ 0.4
NEK4-206ENST00000496822 NCOA7Q8NI08 942 aa17.57■□□□□ 0.4
NEK4-206ENST00000496822 RNPC3Q96LT9 517 aaKnown RBP17.57■□□□□ 0.4
NEK4-206ENST00000496822 FAM161BQ96MY7 647 aa17.57■□□□□ 0.4
NEK4-206ENST00000496822 MRPL11Q9Y3B7 192 aaKnown RBP17.57■□□□□ 0.4
NEK4-206ENST00000496822 UMODL1Q5DID0 1318 aa17.56■□□□□ 0.4
NEK4-206ENST00000496822 B4GALT4O60513 344 aa17.56■□□□□ 0.4
NEK4-206ENST00000496822 MYL3P08590 195 aa17.56■□□□□ 0.4
NEK4-206ENST00000496822 CSF2RAP15509 400 aa17.56■□□□□ 0.4
NEK4-206ENST00000496822 PURAQ00577 322 aaKnown RBP17.56■□□□□ 0.4
NEK4-206ENST00000496822 WTAPQ15007 396 aa17.56■□□□□ 0.4
NEK4-206ENST00000496822 SCFD2Q8WU76 684 aa17.56■□□□□ 0.4
NEK4-206ENST00000496822 MPHOSPH6Q99547 160 aaKnown RBP17.56■□□□□ 0.4
NEK4-206ENST00000496822 AMNQ9BXJ7 453 aa17.56■□□□□ 0.4
NEK4-206ENST00000496822 LSG1Q9H089 658 aaKnown RBP17.56■□□□□ 0.4
NEK4-206ENST00000496822 TRPV6Q9H1D0 765 aa17.56■□□□□ 0.4
NEK4-206ENST00000496822 GPHNQ9NQX3 736 aaPredicted RBP17.56■□□□□ 0.4
NEK4-206ENST00000496822 ZBTB5O15062 677 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms