RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 COL20A1Q9P218 1284 aa22.8■■□□□ 1.24
COL20A1-208ENST00000496810 MAD2L2Q9UI95 211 aa22.8■■□□□ 1.24
COL20A1-208ENST00000496810 KIAA1217Q5T5P2 1943 aa22.8■■□□□ 1.24
COL20A1-208ENST00000496810 IFIT3O14879 490 aaKnown RBP22.79■■□□□ 1.24
COL20A1-208ENST00000496810 DHX16O60231 1041 aaKnown RBP22.79■■□□□ 1.24
COL20A1-208ENST00000496810 PPP1R11O60927 126 aaPredicted RBP22.79■■□□□ 1.24
COL20A1-208ENST00000496810 ASGR1P07306 291 aa22.79■■□□□ 1.24
COL20A1-208ENST00000496810 NOL8Q76FK4 1167 aaKnown RBP22.79■■□□□ 1.24
COL20A1-208ENST00000496810 RALYLQ86SE5 291 aaKnown RBP22.79■■□□□ 1.24
COL20A1-208ENST00000496810 TDHQ8IZJ6 230 aa22.79■■□□□ 1.24
COL20A1-208ENST00000496810 STARD7Q9NQZ5 370 aa22.79■■□□□ 1.24
COL20A1-208ENST00000496810 MOXD2PA6NHM9 499 aa22.78■■□□□ 1.24
COL20A1-208ENST00000496810 BMP2KLQ5H9B9 411 aa22.78■■□□□ 1.24
COL20A1-208ENST00000496810 GNASQ5JWF2 1037 aa22.78■■□□□ 1.24
COL20A1-208ENST00000496810 NCOA7Q8NI08 942 aa22.78■■□□□ 1.24
COL20A1-208ENST00000496810 VTA1Q9NP79 307 aa22.78■■□□□ 1.24
COL20A1-208ENST00000496810 ADD3Q9UEY8 706 aaKnown RBP22.78■■□□□ 1.24
COL20A1-208ENST00000496810 PALM3A6NDB9 673 aaPredicted RBP22.77■■□□□ 1.24
COL20A1-208ENST00000496810 OPLAHO14841 1288 aa22.77■■□□□ 1.24
COL20A1-208ENST00000496810 GRM4Q14833 912 aa22.77■■□□□ 1.24
COL20A1-208ENST00000496810 ABCB11O95342 1321 aa22.77■■□□□ 1.24
COL20A1-208ENST00000496810 KLRF2D3W0D1 207 aa22.76■■□□□ 1.23
COL20A1-208ENST00000496810 EDNRBP24530 442 aa22.76■■□□□ 1.23
COL20A1-208ENST00000496810 NKX3-2P78367 333 aa22.76■■□□□ 1.23
COL20A1-208ENST00000496810 BADQ92934 168 aa22.76■■□□□ 1.23
COL20A1-208ENST00000496810 LBHD1Q9BQE6 289 aaPredicted RBP22.76■■□□□ 1.23
COL20A1-208ENST00000496810 PRKAG2Q9UGJ0 569 aa22.76■■□□□ 1.23
COL20A1-208ENST00000496810 PNMA2Q9UL42 364 aa22.76■■□□□ 1.23
COL20A1-208ENST00000496810 SLC27A2O14975 620 aa22.75■■□□□ 1.23
COL20A1-208ENST00000496810 CLTBP09497 229 aa22.75■■□□□ 1.23
COL20A1-208ENST00000496810 TROAPQ12815 778 aa22.75■■□□□ 1.23
COL20A1-208ENST00000496810 WTAPQ15007 396 aa22.75■■□□□ 1.23
COL20A1-208ENST00000496810 FSCN1Q16658 493 aaKnown RBP22.75■■□□□ 1.23
COL20A1-208ENST00000496810 TMEM67Q5HYA8 995 aa22.75■■□□□ 1.23
COL20A1-208ENST00000496810 CXCL17Q6UXB2 119 aa22.75■■□□□ 1.23
COL20A1-208ENST00000496810 KIAA1211Q6ZU35 1233 aa22.75■■□□□ 1.23
COL20A1-208ENST00000496810 FBXO11Q86XK2 927 aa22.75■■□□□ 1.23
COL20A1-208ENST00000496810 SYTL5Q8TDW5 730 aaPredicted RBP22.75■■□□□ 1.23
COL20A1-208ENST00000496810 IGDCC4Q8TDY8 1250 aa22.75■■□□□ 1.23
COL20A1-208ENST00000496810 MTMR8Q96EF0 704 aa22.75■■□□□ 1.23
COL20A1-208ENST00000496810 MYL10Q9BUA6 226 aa22.75■■□□□ 1.23
COL20A1-208ENST00000496810 SPC25Q9HBM1 224 aa22.75■■□□□ 1.23
COL20A1-208ENST00000496810 DYNC1LI2O43237 492 aaPredicted RBP22.74■■□□□ 1.23
COL20A1-208ENST00000496810 CYTH3O43739 400 aa22.74■■□□□ 1.23
COL20A1-208ENST00000496810 FAAP100Q0VG06 881 aa22.74■■□□□ 1.23
COL20A1-208ENST00000496810 ANKRD33Q7Z3H0 272 aa22.74■■□□□ 1.23
COL20A1-208ENST00000496810 HOMER1Q86YM7 354 aa22.74■■□□□ 1.23
COL20A1-208ENST00000496810 PCSK9Q8NBP7 692 aaKnown RBP22.74■■□□□ 1.23
COL20A1-208ENST00000496810 NUP133Q8WUM0 1156 aa22.74■■□□□ 1.23
COL20A1-208ENST00000496810 GLT1D1Q96MS3 346 aa22.74■■□□□ 1.23
COL20A1-208ENST00000496810 LY9Q9HBG7 655 aa22.74■■□□□ 1.23
COL20A1-208ENST00000496810 ANO2Q9NQ90 1003 aa22.74■■□□□ 1.23
COL20A1-208ENST00000496810 PDE4DQ08499 809 aa22.73■■□□□ 1.23
COL20A1-208ENST00000496810 C9orf50Q5SZB4 431 aa22.73■■□□□ 1.23
COL20A1-208ENST00000496810 CREB3L3Q68CJ9 461 aa22.73■■□□□ 1.23
COL20A1-208ENST00000496810 IQSEC1Q6DN90 963 aa22.73■■□□□ 1.23
COL20A1-208ENST00000496810 TAAR1Q96RJ0 339 aa22.73■■□□□ 1.23
COL20A1-208ENST00000496810 WDR11Q9BZH6 1224 aa22.73■■□□□ 1.23
COL20A1-208ENST00000496810 ELP1O95163 1332 aa22.73■■□□□ 1.23
COL20A1-208ENST00000496810 EYSQ5T1H1 3165 aa22.73■■□□□ 1.23
COL20A1-208ENST00000496810 SCN10AQ9Y5Y9 1956 aa22.72■■□□□ 1.23
COL20A1-208ENST00000496810 RBM47A0AV96 593 aaKnown RBP22.72■■□□□ 1.23
COL20A1-208ENST00000496810 ERICH2A1L162 156 aa22.72■■□□□ 1.23
COL20A1-208ENST00000496810 ARIH2O95376 493 aa22.72■■□□□ 1.23
COL20A1-208ENST00000496810 NECTIN1Q15223 517 aa22.72■■□□□ 1.23
COL20A1-208ENST00000496810 DUSP28Q4G0W2 176 aa22.72■■□□□ 1.23
COL20A1-208ENST00000496810 RGS22Q8NE09 1264 aa22.72■■□□□ 1.23
COL20A1-208ENST00000496810 DNERQ8NFT8 737 aa22.72■■□□□ 1.23
COL20A1-208ENST00000496810 COPS5Q92905 334 aa22.72■■□□□ 1.23
COL20A1-208ENST00000496810 PIGSQ96S52 555 aa22.72■■□□□ 1.23
COL20A1-208ENST00000496810 GRIN2DO15399 1336 aa22.72■■□□□ 1.23
COL20A1-208ENST00000496810 LOC102724159A0A0B4J2E5 919 aa22.71■■□□□ 1.23
COL20A1-208ENST00000496810 ZBTB5O15062 677 aa22.71■■□□□ 1.23
COL20A1-208ENST00000496810 KIAA0355O15063 1070 aa22.71■■□□□ 1.23
COL20A1-208ENST00000496810 PRC1O43663 620 aa22.71■■□□□ 1.23
COL20A1-208ENST00000496810 CDK7P50613 346 aa22.71■■□□□ 1.23
COL20A1-208ENST00000496810 EPHB4P54760 987 aa22.71■■□□□ 1.23
COL20A1-208ENST00000496810 PSMC6P62333 389 aa22.71■■□□□ 1.23
COL20A1-208ENST00000496810 PWP2Q15269 919 aaKnown RBP22.71■■□□□ 1.23
COL20A1-208ENST00000496810 LRIT3Q3SXY7 679 aa22.71■■□□□ 1.23
COL20A1-208ENST00000496810 AP5M1Q9H0R1 490 aa22.71■■□□□ 1.23
COL20A1-208ENST00000496810 TBX21Q9UL17 535 aa22.71■■□□□ 1.23
COL20A1-208ENST00000496810 A0A0U1RQG5 324 aaPredicted RBP22.7■■□□□ 1.22
COL20A1-208ENST00000496810 SART3Q15020 963 aaKnown RBP22.7■■□□□ 1.22
COL20A1-208ENST00000496810 FAM126BQ8IXS8 530 aa22.7■■□□□ 1.22
COL20A1-208ENST00000496810 ZNF654Q8IZM8 581 aa22.7■■□□□ 1.22
COL20A1-208ENST00000496810 PIBF1Q8WXW3 757 aa22.7■■□□□ 1.22
COL20A1-208ENST00000496810 VTI1AQ96AJ9 217 aa22.7■■□□□ 1.22
COL20A1-208ENST00000496810 TOX2Q96NM4 488 aa22.7■■□□□ 1.22
COL20A1-208ENST00000496810 AMNQ9BXJ7 453 aa22.7■■□□□ 1.22
COL20A1-208ENST00000496810 LRRC2Q9BYS8 371 aa22.7■■□□□ 1.22
COL20A1-208ENST00000496810 RIOX1Q9H6W3 641 aa22.7■■□□□ 1.22
COL20A1-208ENST00000496810 TMEM39AQ9NV64 488 aa22.7■■□□□ 1.22
COL20A1-208ENST00000496810 MRPL11Q9Y3B7 192 aaKnown RBP22.7■■□□□ 1.22
COL20A1-208ENST00000496810 MYH7BA7E2Y1 1941 aa22.69■■□□□ 1.22
COL20A1-208ENST00000496810 ARVCFO00192 962 aa22.69■■□□□ 1.22
COL20A1-208ENST00000496810 SH2B2O14492 632 aaPredicted RBP22.69■■□□□ 1.22
COL20A1-208ENST00000496810 CFBP00751 764 aa22.69■■□□□ 1.22
COL20A1-208ENST00000496810 RXRAP19793 462 aa22.69■■□□□ 1.22
COL20A1-208ENST00000496810 SHHQ15465 462 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms